Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_027981.1 Length=42612 Score E Sequences producing significant alignments: (Bits) Value seq503395 212 2e-50 >seq503395 Length=393 Score = 212 bits (234), Expect = 2e-50 Identities = 284/394 (72%), Gaps = 1/394 (0%) Strand=Plus/Minus Query 11843 TGACGATCATTGCTACGGACGGCTATCGCAAAGCGGTGGAGCATAACTCAGGTGGTCGAA 11902 |||| || || || || |||||||| ||||| | ||||| || || || ||||| | Sbjct 393 TGACCATTATCGCCACCGACGGCTACAAAAAAGCTATCGAGCACAATTCTGGCGGTCGCA 334 Query 11903 ATACTGTTATTTATGATGCCCAGGGAAATCCTAATATCATGTGCGTTATTCCGCGCTTCA 11962 |||| || | ||||| || ||||| |||||||| || ||||||||||| |||||||||| Sbjct 333 ATACCGTGGTGTATGACGCTCAGGGTAATCCTAACATTATGTGCGTTATCCCGCGCTTCA 274 Query 11963 ATATCGAAGACCTGGGATTAACTGAGCTTGATCTTGGCACAGGCGTTCATCCTGCATTTG 12022 |||| |||||||| || | ||| | | ||||||||||| ||||| ||||| || Sbjct 273 ATATTGAAGACCTAGGGCTGGTTGACTTAAACCTTGGCACAGGGGTTCACCCTGC-GTTC 215 Query 12023 TAACGAACGGAGCGCCTCGTGGCGAAATCCTTGTCGGCAAATATCTGGCATCATCGGCGG 12082 ||| ||||| | || || || || || | ||||||| ||| |||| ||| | | | Sbjct 214 CAACTAACGGCGTACCCCGCGGTGAGATATTAATCGGCAAGTATTTGGCCTCAACAACTG 155 Query 12083 CGGGCGGCTCTGCCGTTATCGGCGGCCCTCAGCCGCGAACCTCGGTTAACTACGACACGG 12142 || || || || || || ||| |||||||| || |||| |||||| | | Sbjct 154 CGAATGGTAGCGCAGTCATTGGTGGCGTCCAGCCGCGCGTATCAGTTAGCTACGATGCAG 95 Query 12143 CCAAGCAGCTTTGCACGCAAAAGGGTGACAATTGGCACCTTATGTCGATTCACGAATGGG 12202 | || |||| ||||||| || || | ||||||||| | ||||| | ||||| |||| Sbjct 94 CAAAAGAGCTGTGCACGCGCAAAGGCGCAAATTGGCACATGATGTCAGTGCACGAGTGGG 35 Query 12203 CCGCCATTGCGCTCTGGTCTTTTGCTAACGGCAC 12236 |||| |||||||| ||||| | ||||| || || Sbjct 34 CCGCTATTGCGCTATGGTCCCTCGCTAATGGAAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135386636558376