Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027981.1
Length=42612
Score E
Sequences producing significant alignments: (Bits) Value
seq503395 212 2e-50
>seq503395
Length=393
Score = 212 bits (234), Expect = 2e-50
Identities = 284/394 (72%), Gaps = 1/394 (0%)
Strand=Plus/Minus
Query 11843 TGACGATCATTGCTACGGACGGCTATCGCAAAGCGGTGGAGCATAACTCAGGTGGTCGAA 11902
|||| || || || || |||||||| ||||| | ||||| || || || ||||| |
Sbjct 393 TGACCATTATCGCCACCGACGGCTACAAAAAAGCTATCGAGCACAATTCTGGCGGTCGCA 334
Query 11903 ATACTGTTATTTATGATGCCCAGGGAAATCCTAATATCATGTGCGTTATTCCGCGCTTCA 11962
|||| || | ||||| || ||||| |||||||| || ||||||||||| ||||||||||
Sbjct 333 ATACCGTGGTGTATGACGCTCAGGGTAATCCTAACATTATGTGCGTTATCCCGCGCTTCA 274
Query 11963 ATATCGAAGACCTGGGATTAACTGAGCTTGATCTTGGCACAGGCGTTCATCCTGCATTTG 12022
|||| |||||||| || | ||| | | ||||||||||| ||||| ||||| ||
Sbjct 273 ATATTGAAGACCTAGGGCTGGTTGACTTAAACCTTGGCACAGGGGTTCACCCTGC-GTTC 215
Query 12023 TAACGAACGGAGCGCCTCGTGGCGAAATCCTTGTCGGCAAATATCTGGCATCATCGGCGG 12082
||| ||||| | || || || || || | ||||||| ||| |||| ||| | | |
Sbjct 214 CAACTAACGGCGTACCCCGCGGTGAGATATTAATCGGCAAGTATTTGGCCTCAACAACTG 155
Query 12083 CGGGCGGCTCTGCCGTTATCGGCGGCCCTCAGCCGCGAACCTCGGTTAACTACGACACGG 12142
|| || || || || || ||| |||||||| || |||| |||||| | |
Sbjct 154 CGAATGGTAGCGCAGTCATTGGTGGCGTCCAGCCGCGCGTATCAGTTAGCTACGATGCAG 95
Query 12143 CCAAGCAGCTTTGCACGCAAAAGGGTGACAATTGGCACCTTATGTCGATTCACGAATGGG 12202
| || |||| ||||||| || || | ||||||||| | ||||| | ||||| ||||
Sbjct 94 CAAAAGAGCTGTGCACGCGCAAAGGCGCAAATTGGCACATGATGTCAGTGCACGAGTGGG 35
Query 12203 CCGCCATTGCGCTCTGGTCTTTTGCTAACGGCAC 12236
|||| |||||||| ||||| | ||||| || ||
Sbjct 34 CCGCTATTGCGCTATGGTCCCTCGCTAATGGAAC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135386636558376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |