Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_027995.1
Length=41666
Score E
Sequences producing significant alignments: (Bits) Value
seq523693 87.8 5e-13
seq311730 84.2 6e-12
>seq523693
Length=695
Score = 87.8 bits (96), Expect = 5e-13
Identities = 177/258 (69%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 41172 AACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGC 41231
|||||||| | | | ||||| |||||| | ||||| ||| | ||||| |||||||
Sbjct 83 AACAAAGTCATATTAGTCGGCAATTTAGGCCAAGATCCCGAAGTGCGTTATATGCCAAAT 142
Query 41232 GGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACC 41291
||| || || || ||| | | | | || || | ||| ||||| || || ||
Sbjct 143 GGCAATGCCGTGGCCAATATTACCCTTGCTACCAGCGAATCTTGGAAAGACCAA--CAGG 200
Query 41292 GGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAA 41351
| | | || || |||| || || ||||||||||| || || ||||| ||| | || |||
Sbjct 201 GTCAACAACAA-GAACGTACCGAGTGGCACCGCGTGGTGATGTTCGGCAAGTTAGCTGAA 259
Query 41352 ATTGCTAGCGAATACCTGCGCAAAGG-TAGCAAGGTGTTCATTGAAGGCAGCCTGCGAAC 41410
|| | || |||||||| ||||| | |||| || | | ||||||| | ||| ||
Sbjct 260 ATCACGGCTGAGTACCTGCGTAAAGGTTCGCAA-GTTTACCTTGAAGGTAAATTGCAGAC 318
Query 41411 GCGTAAATGGCAGGACCA 41428
||||| ||| | |||||
Sbjct 319 ACGTAAGTGGAAAGACCA 336
>seq311730
Length=9896
Score = 84.2 bits (92), Expect = 6e-12
Identities = 169/251 (67%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 41170 TGAACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAA 41229
||||||||||| | |||| || ||||| | ||||| ||| | ||||| ||||| |
Sbjct 3003 TGAACAAAGTAATTTTGGTTGGTAATTTAGGACAAGATCCTGAAGTACGTTATATGCCTA 2944
Query 41230 GCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCA 41289
|||| || || || ||| | | | | || || | || |||| || || |||| ||
Sbjct 2943 ACGGCAACGGTGTAGCAAATATCACCTTAGCAACTTCAGATAGCTACAAAGACAAAAACA 2884
Query 41290 CCGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAG 41349
| ||| | | | || |||| || |||||||| || || | || || ||| | ||||
Sbjct 2883 CTGGCCAAATGGTTGATAAAACTGAGTGGCACCGTGTGGTATTTTTTGGCAAGTTAGCAG 2824
Query 41350 AAATTGCTAGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAA 41409
|||||| | | ||||| || |||||| | | | ||||||| | || | ||
Sbjct 2823 AAATTGTTGGTGAATATTGCCGTAAAGGTTCACAAATTTATGTTGAAGGTAAACTTCAAA 2764
Query 41410 CGCGTAAATGG 41420
| |||||||||
Sbjct 2763 CACGTAAATGG 2753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132378327304272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |