Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 221 1e-52
seq504380 104 3e-17
seq54337 95.1 1e-14
seq231358 93.3 5e-14
seq496362 91.5 2e-13
seq478780 82.4 9e-11
>seq44246
Length=4029
Score = 221 bits (244), Expect = 1e-52
Identities = 898/1393 (64%), Gaps = 49/1393 (4%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| ||||||
Sbjct 1723 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 1664
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| |||||||| || |||| || |||||||| | | || | | || |||
Sbjct 1663 GCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCC 1604
Query 118302 TTGAG-AGC-----GTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 118355
|| || ||| |||||| || | || || | |||||| |||| || ||
Sbjct 1603 TTCAGCAGCTTCCAGTCCCACAGGTCGGTGGGCGTCTTCTCCC------ACATGTCGTAC 1550
Query 118356 TGGAGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT 118413
|||||||| || | | |||| || | |||| | || || || |||||| |
Sbjct 1549 TGGAGGATGCCCTTGCTGACGGGGGAG---CCTCGTACGTGTCGTAGGGGCCCAGCTCGG 1493
Query 118414 CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCAT 118473
| |||| |||| |||| ||||| ||||| |||| || || || ||||| || | |
Sbjct 1492 CGGCCAGTTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGT 1433
Query 118474 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 118533
||| || ||||||| | ||||| | | || || || || | || || |
Sbjct 1432 TCAGCAGCTGGGCCTCGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCA 1373
Query 118534 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC-- 118591
| || ||||| |||| || || || | || | | | || |||| || ||| |||
Sbjct 1372 GGCCCTGGACGCCGATACCGATCGGCCTGTGGCGCTTGTTGGACT---GATCGGCCTCGG 1316
Query 118592 -CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650
||| || || || || | || || | | | || || || || || || || || |
Sbjct 1315 GCACCGGGTAGAAGTTAATCTCTATGATCTTGTTCAGGTTCTTCACGATCACTTTGGTCA 1256
Query 118651 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 118710
| || || | | | |||||| | || ||| |||| ||| | || |
Sbjct 1255 CAGACTCCAGTTTCTTGAAGTCAAAAGTCCG---CTCGGGGGTGACGTACATGTTGAGAG 1199
Query 118711 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 118770
|||| || |||||||||||||||| | |||||| | | ||| || | |||||||
Sbjct 1198 CGATGGAGGCCAGATTACACACAGCGACCTCATCGCCACTGGAGTATTCAACGATTTCCG 1139
Query 118771 TGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 118830
|||| | ||| | ||| ||||| |||| ||||| || || ||| |||| || |
Sbjct 1138 TGCAGAGGTTGCTGCACTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGG 1079
Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 118890
| || ||||| |||||||| ||||| |||| |||||| ||||||| || || || | ||
Sbjct 1078 CGTCTTTGTACAGCATGTACGGCGTGCCCGACTCCGTCTGGGACTCGATGATGGCGTGCC 1019
Query 118891 AGACATCGGCAGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949
| || | ||| || || || ||| | || ||||| ||| || | ||||||
Sbjct 1018 ACACCTGCTGAGCCTTCACCACACGC-TTGACCCGGCCCTCCCGCTCATATTGGGTGTAG 960
Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAA 119008
|| |||||||| || ||| | ||| ||||| || || | ||||| || |
Sbjct 959 AGCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCC-GGGGCTCTCGCTGGGACACAT 901
Query 119009 GAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066
|||||||| | || | ||| |||| ||||||||| ||||| |||||||| |
Sbjct 900 CAGAGACCA--GTCCTGGTTGCTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACA-A 844
Query 119067 GCCG-AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 119124
|||| |||||||||| | | | ||| || | ||||| || || || |||||
Sbjct 843 GCCGTAGAAGAGATCTCTGGCTCTCTGCTCCTCCTTCCCCGTG-TTCTTCTTCAGCTCCA 785
Query 119125 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CT 119178
||||| | | || ||||||||| |||||||||| |||| | || ||
Sbjct 784 GGAAGTCGAACACGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGTCGCT 725
Query 119179 TACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238
| | | || |||||| ||||| | || ||| ||| | || | ||||| || |
Sbjct 724 T--GTTG-CCGCCCTGGTCGACATAGCGTGCTGTGTTGTTGTAGACCCTCAGCATGGGGA 668
Query 119239 TGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGT 119298
| || | ||| | ||| || || || || | ||| || || |
Sbjct 667 CCAGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTGGATCGGATGCAGC 608
Query 119299 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358
|| | || ||| || || |||||| |||| ||||| | || |||| | | || ||
Sbjct 607 TGACGGCCACACCGATTCCTCCTGCCGACTTGGAGATGAGTGCACACTGCTTCAGCGTGT 548
Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418
||||||| || ||||| ||| |||| | | || ||||||||||| || | ||||
Sbjct 547 CGTAGATGCCCTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGAGAGCTGAG 488
Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGAC 119477
||| | || || ||||||||||| || || | |||||| ||||| || | | ||
Sbjct 487 GCCGGTTGGTTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAAC-CACTTCTCCGAG 429
Query 119478 ATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 119537
| | || ||||||||| | | ||||| || || | ||| || |||| ||| |||
Sbjct 428 AGCAGGTTGTAGGTCTCGATGGCGGCGTCGATATCCGTCTTGTGGATTCCGACCGACACC 369
Query 119538 CGCATAAACATGT 119550
| ||| | |||||
Sbjct 368 CTCATGAGCATGT 356
>seq504380
Length=601
Score = 104 bits (114), Expect = 3e-17
Identities = 221/325 (68%), Gaps = 14/325 (4%)
Strand=Plus/Plus
Query 14150 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA 14209
||||| |||||||| || ||| | ||| || | || || || || |||||||| ||
Sbjct 14 TCAAAACCATCCATTTCGACCAATAATTGGTTCAGTGTCTGCTCACGCTCATCATTACCA 73
Query 14210 GG---CATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACG 14266
||||||| ||| | || |||||| || ||||||||||| || || | |
Sbjct 74 CCGCCCATACCAGAGCCAC---GATGACGACCGACCGCATCAATTTCATCAATAAAGATG 130
Query 14267 ATACATGGTTGA---TTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCG 14323
||||| || |||| | || ||| || ||||| || || | |||||||
Sbjct 131 ATACAAGGCGCGCTCTTTTTA---GCCTGTTCGAACATATCGCGTACACGTGAGGCACCG 187
Query 14324 ACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGA 14382
||||| ||||||||||| ||||||| | | | | |||| || ||| || || ||||
Sbjct 188 ACACCGACAAACATCTCAACAAAATCAGAACCTG-AGATTGAGAAGAACGGCACTTTAGC 246
Query 14383 TTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAG 14442
|||||| || ||||||| ||| | | ||| || || || ||||| ||| | | |
Sbjct 247 TTCACCAGCAATGGCTCTGGCTAACAAGGTTTTACCGGTACCTGGAGGACCTACCATTAA 306
Query 14443 GGCACCACGTGGGATCCTGGCACCA 14467
| ||||||||| ||| | ||||||
Sbjct 307 GATACCACGTGGAATCGTCGCACCA 331
>seq54337
Length=1748
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| ||||||| | |||||||||| |||| ||| ||||| |||||
Sbjct 1338 TAGATGTTGCTGGTGTACGGCTCAATGGACTCATTGTTGCCCAGGATCTGGGCAGTGGAA 1279
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
|||||||||||||| |||| || || |||||
Sbjct 1278 GCTGTGGGCATGGGGGCCAACAGCAGACTGTT 1247
>seq231358
Length=2322
Score = 93.3 bits (102), Expect = 5e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
||||||| | | |||||| ||||| |||||| ||| || ||||| || || | |||||
Sbjct 628 CCTCGTCTCTGCTGATGAGCTCATTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 687
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||| || ||| || || |||||||||||||| ||||||||
Sbjct 688 TCAGCCAGAAGATGGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCAC 736
>seq496362
Length=882
Score = 91.5 bits (100), Expect = 2e-13
Identities = 141/202 (70%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| | ||| |||||||| || || | ||| || ||||| || |||||||| | |||
Sbjct 619 GTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCCTGGCATCAAACC 560
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|| || |||||||||||||| | |||||| | || |||||||| || || |||||
Sbjct 559 TCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAATTCCTTCCACTGC 500
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 130206
|| || |||| | ||||| || || || | || ||||| ||| | || ||
Sbjct 499 TGCAAAAGCAATCAATCGCTCTGCGAA------AGAATCTGAATCAATCCATTGAATTGC 446
Query 130207 CCACTGCGCCTTTTTCTCGATA 130228
||| | ||| || || | ||||
Sbjct 445 CCAGTCCGCTTTCTTTTTGATA 424
>seq478780
Length=440
Score = 82.4 bits (90), Expect = 9e-11
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 14236 ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGT--TGATTTTCACGGGCAACT 14293
||| || || |||||||||||||| || | |||||| ||| |||||| || |
Sbjct 440 ACCTACAGCATCAATTTCATCGATAAAGATGATACAAGGTGCAGATTTT--TTAGCTTGT 383
Query 14294 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 14353
||||| ||||| ||||| | ||||| ||||| |||||||| |||||||||| |
Sbjct 382 TCAAACATATCACGCACACGAGATGCACCAACACCGACAAACATTTCCACAAAATCAGAA 323
Query 14354 GCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 14412
| ||| || | | ||| || || ||||||||||| || || || || || | |||
Sbjct 322 CCTGAA-ATGGTAAAGAATGGCACCTTAGATTCACCAGCAATAGCCTTCGCTAGTAAGGT 264
Query 14413 CTTCCCCGTCCCTGG 14427
|| || || |||||
Sbjct 263 TTTACCTGTACCTGG 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614372838319120
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