Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 241 1e-58
seq6427 140 4e-28
seq152719 136 4e-27
seq59938 131 2e-25
seq59939 127 2e-24
seq152718 109 6e-19
seq103378 104 3e-17
seq353404 96.9 4e-15
seq496362 95.1 1e-14
>seq44246
Length=4029
Score = 241 bits (266), Expect = 1e-58
Identities = 905/1393 (65%), Gaps = 66/1393 (5%)
Strand=Plus/Minus
Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454
||||| | ||| | | ||||||||| || |||||||| || ||| ||||| ||||||
Sbjct 1711 GTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATC 1652
Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAA-ATCTGA 80513
||| | | || ||| |||| || ||||||||| ||| | ||| || | ||
Sbjct 1651 GGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGCTTC 1592
Query 80514 CCAAAAATCAACCCCAACGCTGTGACC--------CCACATGTCGTGCTGCAAGATGCCC 80565
| | || || || | ||| | ||||||||||| ||| | |||||||
Sbjct 1591 C----AGTC--CCACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCC 1538
Query 80566 T--CCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCAC 80623
| | |||| |||| || || |||| ||||| |||||| | |||||| || |
Sbjct 1537 TTGCTGACGGGGGAG---CCTCGTACGTGTCGTAGGGGCCCAGCTCGGCGGCCAGTTCGC 1481
Query 80624 AC---GACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGC 80680
| | ||||| |||| |||| || ||| |||||||| |||||| | ||
Sbjct 1480 AGCTGGCCTCCA---GGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAG-CAGC 1425
Query 80681 -GCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGA 80739
| |||| ||| || || | | | ||||| ||||| |||| |||||||||||
Sbjct 1424 TGGGCCTCGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGGCCCTGG 1365
Query 80740 ACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAA 80799
|||||||| ||||||| | |||||||||||| || | |||||||| || | |||||
Sbjct 1364 ACGCCGATACCGATCGGCCTGTGGCGCTTGTTGGACTGATCGGCCTCGGGCACCGGGTAG 1305
Query 80800 AAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT--GTAACATCATGAA 80857
|||||| | || |||| ||||||||| | | | | | | || ||| | |
Sbjct 1304 AAGTTAATCTCTATGATCTTGTTCAGGTT--CTTCACGATCACTTTGGTCACAGACTCCA 1247
Query 80858 GTTTCTGAAAGTCGAATTGGTTCCCCTTCACAAATGCCGGA-AGGCTCAG------GGAC 80910
|||||| ||||| || || || || || || | | | | || |||
Sbjct 1246 GTTTCTTGAAGTCAAA--AGT--CCGCTCGGGGGTGACGTACATGTTGAGAGCGATGGAG 1191
Query 80911 GCCAGATTGCACACGGCCACCTCTTCAGCATCTGTA-AACTCGACGATTTCCGTGCACAA 80969
|||||||| ||||| || ||||| || || ||| | | || |||||||||||||| |
Sbjct 1190 GCCAGATTACACACAGCGACCTCATC-GCCACTGGAGTATTCAACGATTTCCGTGCAGAG 1132
Query 80970 ATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTT 81029
|| |||| || || |||||||| | |||||| ||| |||||| ||||| ||
Sbjct 1131 GTTGCTGCACTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTT 1072
Query 81030 GTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTC 81089
||| ||||||||| || || | ||| ||| |||| || |||||||| ||| | ||
Sbjct 1071 GTACAGCATGTACGGCGTGCCCGACTCCGTCTGGGACTCGATGATGGCGTGCCACACCTG 1012
Query 81090 GCGCGCCTTGACCAC---CTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTT 81145
| ||||| ||||| ||| || ||| || | |||| | || ||| |||||
Sbjct 1011 CTGAGCCTTCACCACACGCTT---GACCCGGCCCTCCCGCTCATATTGGGTGTAGAGCTT 955
Query 81146 CGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205
| || |||| | || || || | |||| |||| | || ||||||||
Sbjct 954 C-TCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCTCTCGCTGGGACACATCAGAG 896
Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265
|||||| || | |||| || ||||||||| ||| |||||||| | | || ||
Sbjct 895 ACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACAAGCCGTAGA 836
Query 81266 ACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCA 81325
| || || | | | | |||||| | ||| ||| || ||| || ||||| |
Sbjct 835 AGAGATCTCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCGA 776
Query 81326 TGATGTCCGCATGCCATGGCTCCAGATACACGGCGA--TCGAC----CCCTTGCGACGGC 81379
| ||| ||||| |||||||| |||| ||||| || | | |||| ||
Sbjct 775 ACACGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGTCGCTTG---TTGC 719
Query 81380 CACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT 81439
| ||||||| ||| || || || || ||| | || | || ||| |||| | || |
Sbjct 718 CGCCCTGGTCGACATAGCGTGCTGTGTTGTTGTAGACCCTCAGCATGGGGACCAGCCCGT 659
Query 81440 CTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAA 81499
|| | ||||| || || |||| ||| ||| || | ||||| | |
Sbjct 658 TGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTGGATCGGATGCAGCTGACGGCCA 599
Query 81500 GACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTC 81559
|||||| || |||| | |||| || || | |||||| | |||| || || || || |
Sbjct 598 CACCGATTCCTCCTGCCGACTTGGAGATGAGTGCACACTGCTTCAGCGTGTCGTAGATGC 539
Query 81560 CCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTG 81619
|||||||||| || | |||||| |||| ||| ||||| || | |||||| | || |
Sbjct 538 CCTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGAGAGCTGAGGCCGGTTGG 479
Query 81620 AGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCAT 81679
|| || ||||| || || |||| ||||| |||| | | || | ||||| |
Sbjct 478 TTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAACCACTTCTCCGAGAGCAGGTTGT 419
Query 81680 AGGTTTCCTTGAC-GCGTGGAATAT-CGTCACCGTGAATACCGATAGCTACACGCATAAA 81737
|||| || || | |||| | |||| |||| ||| || |||| | || | ||| |
Sbjct 418 AGGTCTCGATGGCGGCGTCG-ATATCCGTC-TTGTGGATTCCGACCGACACCCTCATGAG 361
Query 81738 CATGTACTGGGGC 81750
||||| ||| |||
Sbjct 360 CATGTGCTGCGGC 348
>seq6427
Length=3314
Score = 140 bits (154), Expect = 4e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486
|| || |||||||| || || || ||||||||| | | || | ||| | |||| | |||
Sbjct 3313 CTCACGGGCAAGACCATCACCCTGGAGGTTGAGCCCAGCGACACCATCGAAAATGTCAAG 3254
Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546
|| || || ||||||||||| || ||||| ||||| |||||| | || || ||||| ||
Sbjct 3253 GCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAGCAGAGGCTGATCTTTGCCGGC 3194
Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606
||||| || || |||| || ||||| | ||||| || |||| ||||| ||||| ||
Sbjct 3193 AAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTC 3134
Query 27607 CATCTAGTCTTGCGTCT 27623
||||| ||| | |||||
Sbjct 3133 CATCTTGTCCTCCGTCT 3117
>seq152719
Length=2073
Score = 136 bits (150), Expect = 4e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|| || |||||||| ||||| || || ||||||||||| ||||| | |||||| |
Sbjct 498 ATTCAGATCTTTGTGAAGACCCTCACAGGCAAGACTATCACTCTGGTGGTTGAACCCAAC 439
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | || ||||| || ||||| ||||| || || ||||||||||||
Sbjct 438 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGATAAGGAAGGCATCCCTCCAGACCAG 379
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || ||||| || || || | || || || | ||||| ||
Sbjct 378 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTCTCCGACTACAAC 319
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| || || ||| ||||||| |||||||| ||
Sbjct 318 ATCCAGAAAGAGTCCTGCATTCATCTGGTCTTGCGGCT 281
>seq59938
Length=2926
Score = 131 bits (144), Expect = 2e-25
Identities = 161/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || || |||||||| || || || ||||||||| | | || | ||||| |
Sbjct 2924 GTCAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGCGACACCATTGAA 2865
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||||| || || ||||||||||| || ||||| ||||| |||||| | || ||
Sbjct 2864 AATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAGCAGAGGCTGATC 2805
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
||||| || ||||| || |||| || ||||| | || || |||| |||||
Sbjct 2804 TTTGCCGGCAAGCATTCGGAAGATGGCCGCACCCT--CTCTATACAACATCCAGAAGGAG 2747
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
||||| || | ||| ||| ||| ||| | ||||| |||
Sbjct 2746 TCCACCCTCCGTCTGGTCCTGCATCTGAGGGGTGGTCAA 2708
>seq59939
Length=800
Score = 127 bits (140), Expect = 2e-24
Identities = 127/165 (77%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || || ||||||||| | ||
Sbjct 165 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGCCTAGT 106
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || ||||||||||| || ||||| ||||| |||
Sbjct 105 GACACAATCGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 46
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570
||| | || || ||||| || ||||| || || |||| || |||
Sbjct 45 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACC 1
>seq152718
Length=3078
Score = 109 bits (120), Expect = 6e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|| || |||||||| ||||| || || || |||||||| |||| |||||||| | ||
Sbjct 2601 ATTCAGATCTTTGTGAAGACCCTCACAGGGAAGACTATAGCTCTGGAGGTTGAACCCAGT 2542
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||||| || || || || || || ||||| ||| | ||| ||||||||
Sbjct 2541 GACACCATTGATAATTTCAAAGCCAAGATCCAAGATAAGGAAGGATTCCCTACAGACCAG 2482
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || | |||| || |||| || || || || || || | || || |
Sbjct 2481 CAGAGGCTCAACTTTGGCGGCAAGCTGCTGGAAGACAGCCGCACTCTCTCCGAATACAGC 2422
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| || || || || || ||||| |||||||| ||
Sbjct 2421 ATCCAGAAAGAGTCTACCCTCCATCTGGTCTTGCGGCT 2384
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|| || |||||||| ||||| || | | ||||| | ||||||||| ||||||| ||
Sbjct 2145 ATCCAGATCTTTGTGAAGACCCTGATTGCTAAGACCACCACTCTTGAGATTGAGTCCAGT 2086
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | || || |||||||| ||| | || || | |||||| |||
Sbjct 2085 GACACCATCGAGAATGTCAAATACAAGATTCAGGATAAGAAAGGCATCCATCCAGAGCAG 2026
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || || | || || || || || |||| || || | | ||||| ||
Sbjct 2025 CAGAGCCTGATCTTCGAGGGCAAACAGCTGGATGATGGCCGGACTCCCTCCGACTACAAC 1966
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
| ||||||||||||| | |||||| ||
Sbjct 1965 AGCAAAAAGGAATCCAC-CCTCATCTCGT 1938
>seq103378
Length=1867
Score = 104 bits (114), Expect = 3e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007
|||| || || || ||||||| ||| || || || || ||||| || | ||||||
Sbjct 1781 ACTCCACTATCTCTGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGTTGC 1722
Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||| ||||||| |||||||||||| ||||||||| ||||| || || ||||||||
Sbjct 1721 TCTTCCCGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTTTCAGTCTGTGACT 1662
Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCAC 81104
|| |||||||| ||| | || | ||||| |||||
Sbjct 1661 CGATGATGGCGTACCACAGCTGCTGAGCCTTCACCAC 1625
>seq353404
Length=992
Score = 96.9 bits (106), Expect = 4e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| |||| || || ||||||||||| || || ||||||||| | ||
Sbjct 92 ATGCAGATCTTTGTGAAGAACCTGACAGGCAAGACTATCACCCTGGAGGTTGAGCCCAGT 151
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCT 27516
|||| |||| ||| | ||||| ||||| |||||||| ||||| || |||
Sbjct 152 GATACTATTGAGAATGTCAAGGCCAAAATCCAGGACAAAGAGGGCATCCCT 202
>seq496362
Length=882
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|||||||| ||||||||||||||||| || || | || ||||| ||||||||| |
Sbjct 491 GCTTTTGCAGCAGTGGAAGGAATTTTCTTCTCAGGTGCTTTTTGTTCCATTTTCTGGTTG 550
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845
||||| || || |||||||||| || | || || ||||| |||| ||||| |||||
Sbjct 551 AAAAAACGAGGTTTGATGCCAGGATTGACATTCTCAAACGAATTGATTTCTCGTGACGAA 610
Query 64846 GG 64847
||
Sbjct 611 GG 612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566564159302240
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