Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq20438 116 5e-21
>seq20438
Length=3122
Score = 116 bits (128), Expect = 5e-21
Identities = 229/332 (69%), Gaps = 10/332 (3%)
Strand=Plus/Minus
Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751
|| |||||||| |||||||| || |||||||| | || || || ||||| ||||| ||
Sbjct 1429 GACTTTCCCATTGCCTACTCCATTGTGATCCATGAGAAAATTGAAATGTTTGAGCGACTT 1370
Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811
|| | || | || | || || ||| ||||||| || ||||||||| |||||| |
Sbjct 1369 CTTCGAGCAGTTTATACACCTCAAAACATCTACTGTGTGCACGTGGACCAAAAGTCCTCC 1310
Query 13812 GACGAGTTCATCCGG-GGC-GTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869
|| || || || | ||| || ||| || | || ||||| || ||| | |
Sbjct 1309 GAAGAATT--TCAGAAGGCTGTGGAGGCTATTGTTGCCTGTTTCCCCAATGTGTTTATAG 1252
Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929
| || | | ||| | || | ||||||| || |||||||| || || | ||
Sbjct 1251 CTACAAAACTAGAAAAGGTGATTTATGCCTCCTGGTCCCGTGTGCAGGCGGATCTGAACT 1192
Query 13930 GCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGG 13987
||||| | || ||| || | |||||||| ||||||||||||||||||||| || ||
Sbjct 1191 GCATGACAGATCTGTTGAAG--TCCCCCGTAAAGTGGAGGTACCTGCTCAACACCTGTGG 1134
Query 13988 GATGGACTTCCCGCTCAAGACCAACCTGGAGA 14019
|| |||||||| | || ||||| ||||||
Sbjct 1133 GACCGACTTCCCTATAAAAACCAA--TGGAGA 1104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 654412090411520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |