Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq20438 116 5e-21 >seq20438 Length=3122 Score = 116 bits (128), Expect = 5e-21 Identities = 229/332 (69%), Gaps = 10/332 (3%) Strand=Plus/Minus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || |||||||| |||||||| || |||||||| | || || || ||||| ||||| || Sbjct 1429 GACTTTCCCATTGCCTACTCCATTGTGATCCATGAGAAAATTGAAATGTTTGAGCGACTT 1370 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811 || | || | || | || || ||| ||||||| || ||||||||| |||||| | Sbjct 1369 CTTCGAGCAGTTTATACACCTCAAAACATCTACTGTGTGCACGTGGACCAAAAGTCCTCC 1310 Query 13812 GACGAGTTCATCCGG-GGC-GTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869 || || || || | ||| || ||| || | || ||||| || ||| | | Sbjct 1309 GAAGAATT--TCAGAAGGCTGTGGAGGCTATTGTTGCCTGTTTCCCCAATGTGTTTATAG 1252 Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929 | || | | ||| | || | ||||||| || |||||||| || || | || Sbjct 1251 CTACAAAACTAGAAAAGGTGATTTATGCCTCCTGGTCCCGTGTGCAGGCGGATCTGAACT 1192 Query 13930 GCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGG 13987 ||||| | || ||| || | |||||||| ||||||||||||||||||||| || || Sbjct 1191 GCATGACAGATCTGTTGAAG--TCCCCCGTAAAGTGGAGGTACCTGCTCAACACCTGTGG 1134 Query 13988 GATGGACTTCCCGCTCAAGACCAACCTGGAGA 14019 || |||||||| | || ||||| |||||| Sbjct 1133 GACCGACTTCCCTATAAAAACCAA--TGGAGA 1104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 654412090411520