Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq150714 161 8e-35
seq274812 100 2e-16
>seq150714
Length=4870
Score = 161 bits (178), Expect = 8e-35
Identities = 142/177 (80%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| || |||| ||| || |||||||| ||||| || | |||||||||||| || || ||
Sbjct 2319 AGTCCTGTGATGTGGGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGC 2260
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
|| || || ||||| |||||||| | |||||| ||||||||||| ||||| || |||| |
Sbjct 2259 ACGCCCAGACCCATATCCCCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCAC 2200
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118
||||| ||||| || | ||||||||| || || |||||||||||| || |||| ||
Sbjct 2199 ACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCTGTG 2143
Score = 158 bits (174), Expect = 1e-33
Identities = 140/175 (80%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 30216 CTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTC 30275
|||| ||||| || ||| ||||| ||||| |||||||||||||| |||||||| ||||
Sbjct 1727 CTGCGTTCATGGTCGAGTATTCTGCACCGAAGTGCCTCCACTGGAATCCGTACACGGGTC 1668
Query 30276 CCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGT 30335
||||||| |||||||| |||| | ||| || || |||| || | || || ||||
Sbjct 1667 CCAGGTCGCCCTCTTCTCTGTCCGTGAACCCGAGGTTATCCAGGAACTGTCGAGACCCGT 1608
Query 30336 TGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390
|||| ||||||||||| ||||| ||||| |||||||| |||| |||||| |||||
Sbjct 1607 TGGCTTCCCAGATCTTCACCCCTTTCTCCGAGAGCTCCTTGGCGTTTGTTGACCC 1553
Score = 82.4 bits (90), Expect = 6e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 30114 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30173
||||||||||||| || |||| ||||||||| ||||||||||| || ||| |||| ||
Sbjct 2017 CTTTGGGGTTCCATGCACACATGATGATGCGTCTGTCTTCTGGATTCTTCTGGATGGTGT 1958
Query 30174 CCACGGCGTTTTGCAGCTGATCCACCCC 30201
| | | |||| |||||||| || || ||
Sbjct 1957 CGATGACGTTCTGCAGCTGGTCGACACC 1930
>seq274812
Length=490
Score = 100 bits (110), Expect = 2e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 110406 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 110465
|| |||||||||||| | ||| ||||||| |||| ||||| ||||| || ||||||||
Sbjct 135 CTGCCTGCTGAGGACGATGTTGATCCTGTTGTTCAGGGGTCTGTTCTTCTCCGGGATGGA 194
Query 110466 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
||||| ||||| || ||||| |||||||| ||||| || |||
Sbjct 195 AAACCACGTCTTCCTGCCCATGATCACCACATTCTGTTTACCT 237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403708162442184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |