Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028655.1 Length=39235 Score E Sequences producing significant alignments: (Bits) Value seq512931 141 2e-29 >seq512931 Length=538 Score = 141 bits (156), Expect = 2e-29 Identities = 366/547 (67%), Gaps = 38/547 (7%) Strand=Plus/Plus Query 37036 CCTGCCCGTCCTGACCACTCACCTTCGGTTAAGTCTGTAGGTATCACGGGTCAGT-TAAC 37094 ||||| |||||||||||| || ||||| ||||| || ||| | || || | || | || Sbjct 1 CCTGCTCGTCCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGAC 59 Query 37095 AGGTAGTCGTGCAGACATCATCATTGCCGATGACGTGGAGATTCCCGGTAACAGTGCCAC 37154 ||||| ||||| |||||| ||||||| |||||||| ||| | ||||| ||| || ||| Sbjct 60 TGGTAGCCGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCAC 119 Query 37155 -CACTGGTGCACGCGAT-AAGTTGTGGACGCTGGTGCAAGAGTTTGCCGCTCTGCTCAAG 37212 || | ||| | ||| | ||| || |||||| | || || | || | || ||| Sbjct 120 ACAGT-CCGCAAGGGATCACCTTGGCGA-GCTGGTAAAGGAATTCGATGCGATCCTGAAG 177 Query 37213 CCTCTGCCGACTTCACGTGTTATCTATCTGGGCACACCACAGACCGAGATGACGCTCTAT 37272 ||| ||| ||| | ||||| |||| || ||||||||||| ||||| ||||| Sbjct 178 CCT-----GACGGTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTAC 231 Query 37273 AAGGAACTGGAAGATAACCGTGGGTACACGACTATCATCTGGCCTGCTCTTTATCCTCGG 37332 | |||||| || | |||| || ||| |||| | ||||||||||| | || |||||| Sbjct 232 AGGGAACTTGAGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGG 288 Query 37333 AGTAAAGAAGAGGACAT---GTATTATGGGGACCGCTTAGCGCCTATGCT-GCGAGTAGA 37388 | | | ||| | || || || | ||| || || ||| || | || Sbjct 289 ---GATGTGGCTGACCTTGAGTCCTACTGGCA-CGCCAAGGGCAAGCGCTCACGTCTGGA 344 Query 37389 ATATAC---------------AGAAGGCTACGAGTTCCTCATGGGTCAACCAACAGACCC 37433 ||| |||| | ||||| || | | | || |||||||| Sbjct 345 CCTTACCATGCTCAAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCC 404 Query 37434 TGTACGCTTTGACCTTGATGACTTACGCGAGCGTGAGTTGGAGTACGGCAAGGCTGGCTT 37493 | | || || || ||| ||| | || ||||| || | || ||||||| |||||| Sbjct 405 TATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTT 464 Query 37494 TACTCTACAGTTCATGTTAAACCCGAACCTGAGTGATGCCGAGAAGTACCCTCTGAGGCT 37553 |||||||||||||| | ||||||||||| || || |||||||||||| ||| ||| Sbjct 465 CGCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCT 524 Query 37554 CCGTGAT 37560 |||||| Sbjct 525 GCGTGAT 531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124647672128028