Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq523693 140 1e-28 seq511443 82.4 3e-11 >seq523693 Length=695 Score = 140 bits (154), Expect = 1e-28 Identities = 231/330 (70%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 7279 GGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATG 7338 ||||||||||||||||| | || || || | || || || ||| || || ||| Sbjct 77 GGTGTTAACAAAGTCATATTAGTCGGCAATTTAGGCCAAGATCCCGAAGTGCGTTATATG 136 Query 7339 CCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAG 7398 || || |||||||| ||| |||| || ||||| || |||||||| ||||| ||| | Sbjct 137 CCAAATGGCAATGCCGTGGCCAATATTACCCTTGCTACCAGCGAATCTTGGAAAGACCAA 196 Query 7399 CAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTG 7458 ||| || || ||||| ||||| |||||| |||||||||||| | ||||| | Sbjct 197 CAG---GGTCAACAACAAGAACGTACCGAGTGGCACCGCGTGGTGATGTTCGGCAAGTTA 253 Query 7459 GCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTG 7518 || || ||| | | ||||||||||| || ||||| || || ||| | ||||| | || Sbjct 254 GCTGAAATCACGGCTGAGTACCTGCGTAAAGGTTCGCAAGTTTACCTTGAAGGTAAATTG 313 Query 7519 CGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTC 7578 | || || |||||| | | || |||||| ||| ||||| || || | ||||| Sbjct 314 CAGACACGTAAGTGGAAAGACCAAAGCGGCCAAGACAAGTACACAACTGAAATTGTCGTC 373 Query 7579 GACATGCACGGACAG-ATGCAGATGCTTGG 7607 || | | | ||| ||||||||||| || Sbjct 374 GATCAG-AGTGGCAGCATGCAGATGCTAGG 402 >seq511443 Length=1027 Score = 82.4 bits (90), Expect = 3e-11 Identities = 177/264 (67%), Gaps = 3/264 (1%) Strand=Plus/Plus Query 7279 GGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATG 7338 ||||| || ||||| ||| |||| |||||| | ||| || || || || |||||| Sbjct 492 GGTGTGAATAAAGTGATTTTGGTCGGTAACTTAGGTAAAGATCCTGAGGTTCGTTACATG 551 Query 7339 CCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAG 7398 || ||||||||||| || ||||| | || | || || || ||| ||||| ||| | Sbjct 552 CCAAACGGCAATGCTGTTGCCAACTTTACTATAGCGACAAGTGAGTCGTGGAAAGACCAA 611 Query 7399 CAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTG 7458 || || || || ||||| |||||| ||| | | || | | |||| || Sbjct 612 CA---AGGTCAAATGCAAGAACGTACCGAGTGGCACAACATTGTTATGTATCGTCGTCTT 668 Query 7459 GCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTG 7518 ||||| || || || |||||| | || || || | || || | ||||||| || Sbjct 669 GCGGAAATTGCTGGTGAGTACTTAAAGAAAGGCTCTAAAGTATATTTAGAAGGCAAATTG 728 Query 7519 CGCACCCGCAAGTGGCAGGCTCAG 7542 | ||| | |||||||||| |||| Sbjct 729 CAAACCAGTAAGTGGCAGGATCAG 752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193603462684044