Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028657.1
Length=60919
Score E
Sequences producing significant alignments: (Bits) Value
seq523693 140 1e-28
seq511443 82.4 3e-11
>seq523693
Length=695
Score = 140 bits (154), Expect = 1e-28
Identities = 231/330 (70%), Gaps = 5/330 (2%)
Strand=Plus/Plus
Query 7279 GGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATG 7338
||||||||||||||||| | || || || | || || || ||| || || |||
Sbjct 77 GGTGTTAACAAAGTCATATTAGTCGGCAATTTAGGCCAAGATCCCGAAGTGCGTTATATG 136
Query 7339 CCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAG 7398
|| || |||||||| ||| |||| || ||||| || |||||||| ||||| ||| |
Sbjct 137 CCAAATGGCAATGCCGTGGCCAATATTACCCTTGCTACCAGCGAATCTTGGAAAGACCAA 196
Query 7399 CAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTG 7458
||| || || ||||| ||||| |||||| |||||||||||| | ||||| |
Sbjct 197 CAG---GGTCAACAACAAGAACGTACCGAGTGGCACCGCGTGGTGATGTTCGGCAAGTTA 253
Query 7459 GCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTG 7518
|| || ||| | | ||||||||||| || ||||| || || ||| | ||||| | ||
Sbjct 254 GCTGAAATCACGGCTGAGTACCTGCGTAAAGGTTCGCAAGTTTACCTTGAAGGTAAATTG 313
Query 7519 CGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTC 7578
| || || |||||| | | || |||||| ||| ||||| || || | |||||
Sbjct 314 CAGACACGTAAGTGGAAAGACCAAAGCGGCCAAGACAAGTACACAACTGAAATTGTCGTC 373
Query 7579 GACATGCACGGACAG-ATGCAGATGCTTGG 7607
|| | | | ||| ||||||||||| ||
Sbjct 374 GATCAG-AGTGGCAGCATGCAGATGCTAGG 402
>seq511443
Length=1027
Score = 82.4 bits (90), Expect = 3e-11
Identities = 177/264 (67%), Gaps = 3/264 (1%)
Strand=Plus/Plus
Query 7279 GGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATG 7338
||||| || ||||| ||| |||| |||||| | ||| || || || || ||||||
Sbjct 492 GGTGTGAATAAAGTGATTTTGGTCGGTAACTTAGGTAAAGATCCTGAGGTTCGTTACATG 551
Query 7339 CCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAG 7398
|| ||||||||||| || ||||| | || | || || || ||| ||||| ||| |
Sbjct 552 CCAAACGGCAATGCTGTTGCCAACTTTACTATAGCGACAAGTGAGTCGTGGAAAGACCAA 611
Query 7399 CAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTG 7458
|| || || || ||||| |||||| ||| | | || | | |||| ||
Sbjct 612 CA---AGGTCAAATGCAAGAACGTACCGAGTGGCACAACATTGTTATGTATCGTCGTCTT 668
Query 7459 GCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTG 7518
||||| || || || |||||| | || || || | || || | ||||||| ||
Sbjct 669 GCGGAAATTGCTGGTGAGTACTTAAAGAAAGGCTCTAAAGTATATTTAGAAGGCAAATTG 728
Query 7519 CGCACCCGCAAGTGGCAGGCTCAG 7542
| ||| | |||||||||| ||||
Sbjct 729 CAAACCAGTAAGTGGCAGGATCAG 752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 193603462684044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |