Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028659.1
Length=142987
Score E
Sequences producing significant alignments: (Bits) Value
seq262635 96.9 3e-15
seq520838 93.3 4e-14
seq510375 93.3 4e-14
>seq262635
Length=4132
Score = 96.9 bits (106), Expect = 3e-15
Identities = 121/164 (74%), Gaps = 4/164 (2%)
Strand=Plus/Minus
Query 101492 TTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACTGGCCCGTACTGAGCG 101551
||| ||||| ||||| || || |||||||||||||||| ||||| | || ||||||||
Sbjct 3671 TTTTCCGGTTTACTTACACCCAAAAACCAAAGAAGAATATGCACTTGGGCGCACTGAGCG 3612
Query 101552 TAAAACTGGTGAAGGCCATACTGGCTTTGAGACCTTCTT--CAGCCCGGATGTAACTCTG 101609
|||| |||| ||||| |||| || |||| | || | |||||| ||||| |||||
Sbjct 3611 AAAAAGTGGTAAAGGCTATACCGGTTTTGTG--GTTGATGCCAGCCCAGATGTGACTCTA 3554
Query 101610 GAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGC 101653
|| || || ||| | | ||||| | || || || | |||||
Sbjct 3553 GAGGAAGACTTAGCCAGACGTGATTTAACTATAAACTCTATGGC 3510
>seq520838
Length=421
Score = 93.3 bits (102), Expect = 4e-14
Identities = 115/155 (74%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 15298 TGAATTCTCCTAACTTCTGGGATGGTCAGACCAAAGGTAACAAACACTACTTCTTTATGC 15357
|||| || || ||| |||| || ||| || |||||||| || | ||||| |||
Sbjct 368 TGAACTCACCAAACCATTGGGGTGATCAAACTCTTGGTAACAAGCATTTGTTCTTCATGT 309
Query 15358 TGGAAGGTTGCATTAACCCTGACGATACTCGTGGCTTCTACAATGAGTATCTGCGT-GAC 15416
| || ||||| ||||||| || | | ||||| ||||||||||||| ||| | ||
Sbjct 308 TAGAGGGTTGTGTTAACCCAGAACCTGCGCGTGGATTCTACAATGAGT-TCTTAATGGAT 250
Query 15417 GAGCTGCATGAGCATCGTAAAGTGTTCGAAGTGTT 15451
| || ||||||||||||||||||||||||||||
Sbjct 249 TCGTTGAATGAGCATCGTAAAGTGTTCGAAGTGTT 215
>seq510375
Length=538
Score = 93.3 bits (102), Expect = 4e-14
Identities = 205/304 (67%), Gaps = 4/304 (1%)
Strand=Plus/Plus
Query 101358 ATGAAAGTATATCTGGTAGGTGGCGCTGTTCGTGATGGTCTGCTGGGTCGTCCAGTTCAT 101417
||| || | || || || || ||||| || || ||| ||| | | ||||| || |
Sbjct 18 ATGCAAATTTACCTTGTCGGCGGCGCGGTACGCGATCAACTGTTAGCACGTCCTATTAAA 77
Query 101418 GACCGTGATTACGTGGTTGTGGGTGCAACACACGAAGAGATGATTGAAAAAGGTTTCACC 101477
|| |||| || || || |||||||| | ||| ||| |||| ||| |||
Sbjct 78 GATAAAGATTTTGTCGTCGTTGGTGCAACTGTTGCAGAAATGCTTGATGCAGGGTTCCAG 137
Query 101478 CAGGTTGGCGCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACTG 101537
|| || || || | |||||| || | ||||||||| | | | | |||||||||||||||
Sbjct 138 CAAGTGGGTGCAGATTTCCCTGTATTTTTGCATCCTAATAGCCATGAAGAATACGCACTG 197
Query 101538 GCCCGTACTGAGCGTAAAACTGGTGAAGGCCATACTGGCTTT-GAG-ACCTTCTTCAGCC 101595
|| || ||||| || ||| || || ||| |||||| | | || | | ||| |
Sbjct 198 GCACGCACTGAACGCAAAGAAGGCTTGGGGTATAAAGGCTTTAGCGTACATGC--CAGTC 255
Query 101596 CGGATGTAACTCTGGAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGCTA 101655
| || || | | |||||||| || ||||| ||| ||||||| ||||| ||||| |
Sbjct 256 CTGACGTCAGCTTAAAAGAGGATCTACAACGTCGAGACTTGACGATTAATGCCATGGCCA 315
Query 101656 AAGA 101659
|||
Sbjct 316 TAGA 319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 454425642624240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |