Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq509954 125 9e-24 >seq509954 Length=433 Score = 125 bits (138), Expect = 9e-24 Identities = 255/378 (67%), Gaps = 7/378 (2%) Strand=Plus/Plus Query 127326 GCAAACATTCTGTCAACTGAAGTTTTGGCTGAAATCAACCGTGAAGTTGTGAGAACTGTA 127385 ||||| ||||| ||||||||| || | || ||||| |||||||| | | | || ||| Sbjct 51 GCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTA 110 Query 127386 TACAAAGTCGCAAGACCTGGTGCACAGAATAACACAGCAACTGCAGGTATCTTCGACCTC 127445 || | |||| |||||||||||| | | |||||| || ||||||||||| | Sbjct 111 TATGCAACTGCAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTA 170 Query 127446 GACGTTGACTCCAACGGTAGATGGTCTGTTGAGAAATTTAAAGGTCTTCTATTCCAGATC 127505 ||||| || | || ||| | ||||| || || ||||| ||||| ||| | ||||| || Sbjct 171 GACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATT 230 Query 127506 GAAAGAGACATGAATGCTATCGGGCATGAAACTCGTCGTGGGAAGGGCAACATCCTCATC 127565 ||| | || || |||| | ||||| | ||||| || || ||| | | ||| Sbjct 231 GAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATC 290 Query 127566 TGCTCTGCTGATGTGGCATCTGCACTTTCAATGGCTGGTGTGCTTGATTACACTCCTGCA 127625 || || |||| || || |||||| | | ||||| | ||||||| | | ||||| Sbjct 291 TGTTCATCTGACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCT 350 Query 127626 CTTTCTGGTAA-CAGCAACCTTCTCCCAGATGATAACAGCAGCACTCTTGCTGGTACTCT 127684 | |||| || | ||| | |||||||| | | | || |||||||| ||| Sbjct 351 ATCTCTGCAAATCTACAAAGT------AGATGATACCGGTAATACATTTGCTGGTGTTCT 404 Query 127685 TAACGGTAGAATCAAGGT 127702 |||||| | |||| || Sbjct 405 AAACGGTCGTTTCAAAGT 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 599530181072640