Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq497288 120 3e-22 >seq497288 Length=389 Score = 120 bits (132), Expect = 3e-22 Identities = 181/256 (71%), Gaps = 1/256 (0%) Strand=Plus/Plus Query 24282 CATGATGTCGTCAAAGACGATCGACGGATCTGCCAGGATGTTACGGATGATATGGGTGTA 24341 ||||||||| ||||||||||| | || || | || ||||| ||||||||||| || Sbjct 131 CATGATGTCATCAAAGACGATAGCAGGGTCATTGATAATATTACGAATGATATGGGTATA 190 Query 24342 TGAGCGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCTACCCATGTTTCCAGGGTTGT 24401 ||| ||||| || |||||| |||| ||| ||||| | ||| ||||| || | Sbjct 191 GCTGCGCGAGTGAATGGTCTCAGAAAACGTCCACGTCTCAATCCACGTTTCAAGCTCAGG 250 Query 24402 GTCGGACACGATCGGGAGCAGAACTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGAAG 24461 ||||| | ||| | || || |||| || | ||| || || | ||| || || || Sbjct 251 AATAGACACCAGCGGCAATAGCACCACGTTTGGGCTACGACCTTGGATAGAGTCGAGTAG 310 Query 24462 GATCTGGTACTTCAGGTTGCTGATGAAGATGTGCT-TCTCGTGATCCGGCAGATTCATGT 24520 | |||| ||||| ||||| ||||| ||||| |||| ||| || || |||||| Sbjct 311 GGTCTGATACTTTAGGTTACTGATAAAGATATGCTGACTCATGCGACGACAGATTGCCAA 370 Query 24521 AGTCGATACGGTCACG 24536 ||||||||||||| || Sbjct 371 AGTCGATACGGTCGCG 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475867862184640