Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028683.1
Length=177643
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 219 5e-52
seq497460 104 3e-17
seq509673 100 3e-16
>seq449735
Length=3187
Score = 219 bits (242), Expect = 5e-52
Identities = 409/595 (69%), Gaps = 17/595 (3%)
Strand=Plus/Minus
Query 147603 GAACAGTTCGAGAGCCTTAATACGTTTCTTACGAACAGTTGGGTCACGTTCTAAGGTCTG 147662
||||||||| | ||| ||||| ||||| ||||||| | | ||| |||| | |
Sbjct 612 GAACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTGATTCGTCTTGTTCGTATTTTAC 553
Query 147663 ATAAAGATTACGGAACGCTTCTGGGTCTTTAAAGTAATCTTCATAAAGCAGTCCACCACA 147722
|||||| ||| | ||| |||||| ||| | | || ||||| | | ||||
Sbjct 552 ATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAG--GCCTGGCACA 495
Query 147723 AACTTCAG---GGCTGAATAATGTGATGTAGTCATTCTTAATAAGACGTTCTAACATCAG 147779
|||| |||| || || || |||||||| | ||||| | ||| |||| ||
Sbjct 494 ----TCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAG 439
Query 147780 GTCATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACACCTTTATT 147839
| ||||| ||| ||||| |||||||| ||||| | ||||| || || || || ||
Sbjct 438 TTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTT 379
Query 147840 GTTTTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACAATGTTGC 147899
||||| || || | |||||||| |||||||||||||||| || ||| |||| |||||
Sbjct 378 ATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGC 319
Query 147900 TGCACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAGCTTGAATAGT-TTTCC 147958
||| || ||||||||||| ||||| ||||| |||||| | | ||||| ||| ||
Sbjct 318 TGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAA-AGTGCTTAT 260
Query 147959 AGAATGGAATCACGCCTGTGTGCTTAACTTCACCATGTCCAATCTTAGAACCTTCTGCAC 148018
| || ||||| || || || | |||| |||| | ||| | ||| |||||
Sbjct 259 AAAAAGGAATACAACCCGTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCAC 200
Query 148019 GAATCATACCAGCGTTAACACCAATACCAGCTCGTTTACTGATGTACTTAATGATTGAAG 148078
|||| ||| ||||||| ||||| || || |||| | ||| |||| |||| ||
Sbjct 199 GAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAG 140
Query 148079 CATTTGTGGTATTAATCGAATCCAGTGAATCACCACCTTCAATAACAACACAACTCGAG- 148137
|||| ||||| ||||| || || |||| || || | ||||| ||||
Sbjct 139 ACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACA---CGAGC 83
Query 148138 --AATTGACGAGTCGGAGTACGAACACCTGCCATAATTGGAGTTGGCAGTGAAAT 148190
|| || || || || ||||||||||||||||||||||| || || ||||||||
Sbjct 82 TAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
>seq497460
Length=577
Score = 104 bits (114), Expect = 3e-17
Identities = 208/303 (69%), Gaps = 8/303 (3%)
Strand=Plus/Minus
Query 139192 GTTCCATTTTTAAAGCCAACGCACATAGGCAGGCCTGAAGCAATTTCACGGTGTGTCTGA 139251
|| || |||||||||||||| ||||| || || || ||||||||||| || ||
Sbjct 549 GTGCCGTTTTTAAAGCCAACAGGCATAGACAAACCACTGGCCATTTCACGGTGAGTTTGT 490
Query 139252 CTCTCGGTTGTACGAGCGCCGATTGC-GACCCAAGAGAAA-ATACCTGTAAGATACTTAA 139309
|| || ||||| || || || || |||| || ||| | | | || || |
Sbjct 489 GATTCAGTAGTACGCGCACCAATAGCAGACC--AGCTAAACAGATCGCCAATGTATTGTG 432
Query 139310 TCGTGAATGGGTCCAACACTTCAGTCGCTAGTGGAAGGCCTAAGCTTAATAGTTCTAAGC 139369
| | ||| ||||| |||||||||| | || | ||||| | | | |||
Sbjct 431 GACTAATTGGATCCAATGCTTCAGTCGCGATAGGTAAACCTAACTCTGAAATCCATAATA 372
Query 139370 AAAGTTCGCGAGCCATTTCGAGCCCACGGTTT--ATGTCAAATGAGCCATTCAATTCTGG 139427
| ||||| || || ||| || || ||||| || ||||||||| ||| || | ||
Sbjct 371 ATAGTTCACGCGCTTTTTTAAGGCC--GGTTTCGATATCAAATGAGTCATCCATATGAGG 314
Query 139428 GTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAATAAACACGCAT 139487
||||||||| | ||||||||||| || || || | |||||| |||||||||||||||||
Sbjct 313 GTCGTTAATTAGCCCTTTCCAACCCACTGTAGTACGTGGTTTTTCAAAATAAACACGCAT 254
Query 139488 AAC 139490
|||
Sbjct 253 AAC 251
>seq509673
Length=441
Score = 100 bits (110), Expect = 3e-16
Identities = 136/187 (73%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 147783 ATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACACCTTTATTGTT 147842
||| | ||| ||||| ||||| | ||||| | |||||| || || || || || ||
Sbjct 221 ATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATT 280
Query 147843 TTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACAATGTTGCTGC 147902
|||||| || | | || |||||||||||||| | ||| || |||| || |||||
Sbjct 281 TTTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGC 340
Query 147903 ACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAGCTT-GAATAGTTTTCCAGA 147961
||| ||||| || || ||||| || || ||||||||| || || ||| || ||| |||
Sbjct 341 ACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAG-TTTATAGA 399
Query 147962 ATGGAAT 147968
|||| ||
Sbjct 400 ATGGGAT 406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564596370731760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |