Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028684.1
Length=41563
Score E
Sequences producing significant alignments: (Bits) Value
seq516303 136 1e-27
>seq516303
Length=336
Score = 136 bits (150), Expect = 1e-27
Identities = 151/200 (76%), Gaps = 1/200 (1%)
Strand=Plus/Minus
Query 40241 TATCAGGACGAAGAACGTTTGTACTTTCCAACATTTATTGATTGGCGAGGTCGGCTTTAC 40300
||||| ||||| | | ||||||| ||||| |||||||||||||| || || | |||
Sbjct 200 TATCAAGACGAGGTAGCCCTGTACTTCCCAACCTTTATTGATTGGCGTGGACGATTGTAC 141
Query 40301 TTCCGTAGTAGTATTAACCCACAGTCCAACGATTGTATTAAAGGTTGTCTTGAATTTGCA 40360
|| | |||| | || |||||||| | | ||| | |||||||||||||| || ||
Sbjct 140 TTTAGAAGTAACTTGAATCCACAGTC-ATCTATTCAGTCAAAGGTTGTCTTGAGTTCGCT 82
Query 40361 GAGGGTAAACCTTTAGGTAAAACGGGACTTAAATGGTTAAAGATTCATGTTGCAAACTGT 40420
|||||||||| | ||||| | || |||| |||||||| |||||| || |||||
Sbjct 81 GAGGGTAAACGTCTAGGTTCAGATGGTCTTATGTGGTTAAAAGCTCATGTAGCTAACTGC 22
Query 40421 TGTGGTTATGATAAACATGA 40440
||||||||||||||||| ||
Sbjct 21 TGTGGTTATGATAAACACGA 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132050784119100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |