Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028688.1 Length=40114 Score E Sequences producing significant alignments: (Bits) Value seq512931 163 7e-36 >seq512931 Length=538 Score = 163 bits (180), Expect = 7e-36 Identities = 358/528 (68%), Gaps = 50/528 (9%) Strand=Plus/Plus Query 2839 CCGGACCACAGCCCGTCAGTTAAGTCTGTGGGTATTACGGGTCAGCTAACTGGTAGCCGT 2898 || ||||||||||| || || ||||| |||||| |||| || | |||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 2899 GCTGATATCATCATTGCGGATGACGTGGAGATTCCCGGTAACTCTGCGACCCAAGGTGCC 2958 ||||| ||| |||||||||||||||| ||| | ||||| ||||||| || || || | Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACA--GTCCG 127 Query 2959 CGAGAGA--AACTCTGGACGTTGGTTCAGGAGTTCGCCGCACTGTTGAAACCTCTGCCGA 3016 | || || | || | | |||| |||| |||| || | |||| ||| || Sbjct 128 CAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GA 182 Query 3017 CTAGCCGTGTTATCTATCTGGGGACCCCTCAGACCGAGATGACGCTCTACAAGGAACTTG 3076 | || | ||||| |||| ||||| |||||||| ||||| ||||||| |||||||| Sbjct 183 CGGTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241 Query 3077 AGGACAACCGTGGGTACTCCACCATTATCTGGCCTGCACAGTATCCCCGCTCCAAAGAGG 3136 ||| |||| || ||||| || | ||||||||||||| || || || | | || Sbjct 242 AGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG---GGATGTGG 295 Query 3137 AAGACCT---GTACTA-TGG--CGAC---------------CGTCTGG---CTCCGATGC 3172 ||||| || ||| ||| || | ||||||| | | |||| Sbjct 296 CTGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGC 355 Query 3173 TCCGTAGTGAGTACGATGAGGACAAAGAGGGCCTCAGTAGTCAACCTACTGACCCGGTGC 3232 || | ||| || || ||| | || || | | | ||||| ||||| | | Sbjct 356 TC---AAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGA---AGCCTACAGACCCTATTC 409 Query 3233 GATTCGACTCCATG--GACCTTCAGGAGCGTGAGGTGGAATACGGCAAGGCTGGCTATAC 3290 ||||||| ||| ||||| | ||||| || | ||| ||||||| ||||| | Sbjct 410 GATTCGA--TGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGC 467 Query 3291 GCTTCAGTTCATGCTCAACCCGAACCTCAGTGACGCCGAGAAGTACCC 3338 || ||||||||||||||||||||||| || ||| |||||||||||| Sbjct 468 TCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127442919310224