Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028696.2
Length=41338
Score E
Sequences producing significant alignments: (Bits) Value
seq315065 205 2e-48
seq512503 132 1e-26
seq259072 120 8e-23
seq501738 116 1e-21
seq508319 87.8 5e-13
seq477953 84.2 6e-12
>seq315065
Length=1253
Score = 205 bits (226), Expect = 2e-48
Identities = 342/491 (70%), Gaps = 10/491 (2%)
Strand=Plus/Minus
Query 39483 GCTGTAATATCCAACGATATAGTCCGTTATTGCGTG---AGCTGCATCGCTGAAGCTTAC 39539
||||||||| |||| |||||| | || | | || |||| || | || ||
Sbjct 1224 GCTGTAATAGCCAATGATATAATTGGTCACATCTTGTTTAGCTTCAACA---AAACTCTT 1168
Query 39540 ATAGCCCGTCGCCGGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCT 39599
|||||| || ||||||||||| | || | ||||||||| || |||||||||||
Sbjct 1167 ATAGCCTTGCGTTGGCACCCATTCCGTTTTTAAACTCCTGAAAAATCGCTCCATTGGCGC 1108
Query 39600 GTTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAA 39659
|||||||||||||| || || |||||||| || || | || || | ||||| ||
Sbjct 1107 ATTATCCCAGCAGTTACCTCGGCGACTCATGCTTTGTGTAATTTTATAGCGCCACA--AA 1050
Query 39660 C--TGCCGGAACTGCCTGCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCG 39717
| || ||| ||| | ||||||||||| || ||||| || ||| ||||||| ||
Sbjct 1049 CGTTGGCGGTACTTCAAACTCGTATAATGGCTACCTTGGTCTGAGTGAAACATCAATCCA 990
Query 39718 ACGGGCTTACCACGGGTTTCCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGCTGTCC 39777
||| | || | | |||| | |||| || || ||||| | || | | | ||
Sbjct 989 CTTGGCCTGCCTCTGCTTTCATAAGCCAACTCAAGCGCTTTTAGCGTTAAGTTAGTATCT 930
Query 39778 GGCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCG 39837
||||| |||||||| ||||| || || ||| | || || | || | ||| || ||
Sbjct 929 GGCGACAACGACATTGCCCAACCAACGACTTTGCGCGCAAATAAATCAATAACGACCGCT 870
Query 39838 AGGTACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTT 39897
| || |||||||| ||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct 869 AAATAAGCCCAGCGATTACCTGTCCAAATATACGTCACATCACCGCACCACACAGTATTC 810
Query 39898 GGCTCGGTCACGGCGAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCA 39957
|| || || | ||||||| || || | || ||||| ||| ||| |||| ||||
Sbjct 809 GGTTCAACAACATCAAACTGCCTATCTAGCAAATTTGGGATTTCAAAATGCTCATTACCA 750
Query 39958 CCACGTTTATA 39968
|||||||||||
Sbjct 749 CCACGTTTATA 739
Score = 205 bits (226), Expect = 2e-48
Identities = 342/491 (70%), Gaps = 10/491 (2%)
Strand=Plus/Minus
Query 16858 GCTGTAATATCCAACGATATAGTCCGTTATTGCGTG---AGCTGCATCGCTGAAGCTTAC 16914
||||||||| |||| |||||| | || | | || |||| || | || ||
Sbjct 1224 GCTGTAATAGCCAATGATATAATTGGTCACATCTTGTTTAGCTTCAACA---AAACTCTT 1168
Query 16915 ATAGCCCGTCGCCGGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCT 16974
|||||| || ||||||||||| | || | ||||||||| || |||||||||||
Sbjct 1167 ATAGCCTTGCGTTGGCACCCATTCCGTTTTTAAACTCCTGAAAAATCGCTCCATTGGCGC 1108
Query 16975 GTTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAA 17034
|||||||||||||| || || |||||||| || || | || || | ||||| ||
Sbjct 1107 ATTATCCCAGCAGTTACCTCGGCGACTCATGCTTTGTGTAATTTTATAGCGCCACA--AA 1050
Query 17035 C--TGCCGGAACTGCCTGCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCG 17092
| || ||| ||| | ||||||||||| || ||||| || ||| ||||||| ||
Sbjct 1049 CGTTGGCGGTACTTCAAACTCGTATAATGGCTACCTTGGTCTGAGTGAAACATCAATCCA 990
Query 17093 ACGGGCTTACCACGGGTTTCCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGCTGTCC 17152
||| | || | | |||| | |||| || || ||||| | || | | | ||
Sbjct 989 CTTGGCCTGCCTCTGCTTTCATAAGCCAACTCAAGCGCTTTTAGCGTTAAGTTAGTATCT 930
Query 17153 GGCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCG 17212
||||| |||||||| ||||| || || ||| | || || | || | ||| || ||
Sbjct 929 GGCGACAACGACATTGCCCAACCAACGACTTTGCGCGCAAATAAATCAATAACGACCGCT 870
Query 17213 AGGTACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTT 17272
| || |||||||| ||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct 869 AAATAAGCCCAGCGATTACCTGTCCAAATATACGTCACATCACCGCACCACACAGTATTC 810
Query 17273 GGCTCGGTCACGGCGAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCA 17332
|| || || | ||||||| || || | || ||||| ||| ||| |||| ||||
Sbjct 809 GGTTCAACAACATCAAACTGCCTATCTAGCAAATTTGGGATTTCAAAATGCTCATTACCA 750
Query 17333 CCACGTTTATA 17343
|||||||||||
Sbjct 749 CCACGTTTATA 739
Score = 150 bits (166), Expect = 5e-32
Identities = 126/153 (82%), Gaps = 6/153 (4%)
Strand=Plus/Minus
Query 40246 TTCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTA 40305
||| |||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 456 TTCTCGATTAACGAGAATTGTTCAGGGAGTCGGACATCAAGAGAGCGGTAGCCTTTTTTA 397
Query 40306 ATATTTCATTTTCCATTTCAATACGTTGTA---GCTTTTTCCTGAGCTCACGGATTTCAA 40362
|||| || ||||| | |||||| ||||||| ||||||| || |||||||||||||
Sbjct 396 ATATATCCTTTTCTAATTCAATGCGTTGTATTTGCTTTTTA---AGTTCACGGATTTCAA 340
Query 40363 TTTGTTCCGGGGTAATGGGGGAGGCTTTTGGTG 40395
||||||| || || || || || || |||||
Sbjct 339 TTTGTTCGGGCGTCATTGGTGAAGCAGCTGGTG 307
Score = 150 bits (166), Expect = 5e-32
Identities = 126/153 (82%), Gaps = 6/153 (4%)
Strand=Plus/Minus
Query 17621 TTCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTA 17680
||| |||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 456 TTCTCGATTAACGAGAATTGTTCAGGGAGTCGGACATCAAGAGAGCGGTAGCCTTTTTTA 397
Query 17681 ATATTTCATTTTCCATTTCAATACGTTGTA---GCTTTTTCCTGAGCTCACGGATTTCAA 17737
|||| || ||||| | |||||| ||||||| ||||||| || |||||||||||||
Sbjct 396 ATATATCCTTTTCTAATTCAATGCGTTGTATTTGCTTTTTA---AGTTCACGGATTTCAA 340
Query 17738 TTTGTTCCGGGGTAATGGGGGAGGCTTTTGGTG 17770
||||||| || || || || || || |||||
Sbjct 339 TTTGTTCGGGCGTCATTGGTGAAGCAGCTGGTG 307
>seq512503
Length=416
Score = 132 bits (146), Expect = 1e-26
Identities = 199/280 (71%), Gaps = 2/280 (1%)
Strand=Plus/Minus
Query 40241 TGAGTTTCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTT 40300
|||||||| | |||| |||| |||||||||||||||||||||| || || ||||||||
Sbjct 369 TGAGTTTCTCAATTAATAAGAATTGTTCAGGGAGTCTGACATCAACAGAGCAGTAGCCTT 310
Query 40301 TTTTAATATTTCATTTTCCATTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTC 40360
|||||| || || ||||| | ||||||||||| || |||| | || | || |||||
Sbjct 309 TTTTAAAATATCCTTTTCTAATTCAATACGTTCTATTGTTTTTTTAAGTGCTCGTATTTC 250
Query 40361 AATTTGTTCCGGGGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAA 40420
|||||| || | ||| || || | ||||| ||| | || | || || || |
Sbjct 249 AATTTGCTCAGCGGTCATCGGTGCTGCTTTGGGTTTGACCCCTTTACGTTCTTCTTTGAG 190
Query 40421 TTGTTTCACCCA-TCGCGTCATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTG 40479
||||| ||||| | || | || || ||| || || |||| || | |||||||||
Sbjct 189 CTGTTTTACCCACTTGC-TAATGGTTGAATAACCAACTCCCATTGCTTTAGCTGCATCTT 131
Query 40480 CCACGGTGTAATTCTGGTCAACGACCAGTTGAGCGGATTC 40519
| ||||||| | ||||| || | ||||||| |||
Sbjct 130 CGTGGGTGTAACCATTATCAACAACTAACTGAGCGGTTTC 91
Score = 132 bits (146), Expect = 1e-26
Identities = 199/280 (71%), Gaps = 2/280 (1%)
Strand=Plus/Minus
Query 17616 TGAGTTTCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTT 17675
|||||||| | |||| |||| |||||||||||||||||||||| || || ||||||||
Sbjct 369 TGAGTTTCTCAATTAATAAGAATTGTTCAGGGAGTCTGACATCAACAGAGCAGTAGCCTT 310
Query 17676 TTTTAATATTTCATTTTCCATTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTC 17735
|||||| || || ||||| | ||||||||||| || |||| | || | || |||||
Sbjct 309 TTTTAAAATATCCTTTTCTAATTCAATACGTTCTATTGTTTTTTTAAGTGCTCGTATTTC 250
Query 17736 AATTTGTTCCGGGGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAA 17795
|||||| || | ||| || || | ||||| ||| | || | || || || |
Sbjct 249 AATTTGCTCAGCGGTCATCGGTGCTGCTTTGGGTTTGACCCCTTTACGTTCTTCTTTGAG 190
Query 17796 TTGTTTCACCCA-TCGCGTCATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTG 17854
||||| ||||| | || | || || ||| || || |||| || | |||||||||
Sbjct 189 CTGTTTTACCCACTTGC-TAATGGTTGAATAACCAACTCCCATTGCTTTAGCTGCATCTT 131
Query 17855 CCACGGTGTAATTCTGGTCAACGACCAGTTGAGCGGATTC 17894
| ||||||| | ||||| || | ||||||| |||
Sbjct 130 CGTGGGTGTAACCATTATCAACAACTAACTGAGCGGTTTC 91
>seq259072
Length=302
Score = 120 bits (132), Expect = 8e-23
Identities = 189/264 (72%), Gaps = 10/264 (4%)
Strand=Plus/Plus
Query 16752 TTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCG 16811
||| ||||||||| |||||||||||| || || | || |||||||| || || |
Sbjct 12 TTGTAGTGGTCAAGTAAAACTGGCCACGGATTTGTA-TTCAAGCCAGTATCTTTTCTCTG 70
Query 16812 ATTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAA 16871
| || || |||| |||||| || ||||| ||| ||||| | | ||||||||||||||
Sbjct 71 ACTCATTCGGTGTTAACCCTCCGTTATAACTGTGAGGTCTAACTTTGCTGTAATATCCAA 130
Query 16872 CGATATAGTCCGTTATTGCG---TGAGCTGC-ATCGCTGAAGCTTACATAGCCCGTCGCC 16927
||| ||||| | || | | |||| | || || ||| ||| ||||| |
Sbjct 131 TGATGTAGTCAACAACTGAGCTTTCAGCTTCAATAAATG-AGC---GATAACCCGTTGTT 186
Query 16928 GGCACCCATTC-GTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCA 16986
|| | |||||| ||| || | | || ||||| |||||||| ||||| |||||||| ||
Sbjct 187 GGTATCCATTCTGTTTTTAAACTTTCTAAAGAATCGCTCCATCGGGCTATTATCCCAACA 246
Query 16987 GTTTCCACGCCGACTCATACTCTG 17010
|| || || ||||||||||| ||
Sbjct 247 ATTGCCTCGTCGACTCATACTTTG 270
Score = 118 bits (130), Expect = 3e-22
Identities = 188/263 (71%), Gaps = 10/263 (4%)
Strand=Plus/Plus
Query 39378 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 39437
|| ||||||||| |||||||||||| || || | || |||||||| || || ||
Sbjct 13 TGTAGTGGTCAAGTAAAACTGGCCACGGATTTGTA-TTCAAGCCAGTATCTTTTCTCTGA 71
Query 39438 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 39497
|| || |||| |||||| || ||||| ||| ||||| | | ||||||||||||||
Sbjct 72 CTCATTCGGTGTTAACCCTCCGTTATAACTGTGAGGTCTAACTTTGCTGTAATATCCAAT 131
Query 39498 GATATAGTCCGTTATTGCG---TGAGCTGC-ATCGCTGAAGCTTACATAGCCCGTCGCCG 39553
||| ||||| | || | | |||| | || || ||| ||| ||||| | |
Sbjct 132 GATGTAGTCAACAACTGAGCTTTCAGCTTCAATAAATG-AGC---GATAACCCGTTGTTG 187
Query 39554 GCACCCATTC-GTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAG 39612
| | |||||| ||| || | | || ||||| |||||||| ||||| |||||||| ||
Sbjct 188 GTATCCATTCTGTTTTTAAACTTTCTAAAGAATCGCTCCATCGGGCTATTATCCCAACAA 247
Query 39613 TTTCCACGCCGACTCATACTCTG 39635
|| || || ||||||||||| ||
Sbjct 248 TTGCCTCGTCGACTCATACTTTG 270
>seq501738
Length=316
Score = 116 bits (128), Expect = 1e-21
Identities = 194/278 (70%), Gaps = 2/278 (1%)
Strand=Plus/Plus
Query 17115 ATGCCATTTCCAGTGCTTTCATGGTAAGCCTGCTGTCCGGCGAGAACGACATGGCCCAGC 17174
||||||||| || ||||| ||| ||| || || || || || |||| ||||| |
Sbjct 12 ATGCCATTTTCAAAGCTTTACAGGTCAGCTCACTATCTGGTGATAATGACAAAGCCCATC 71
Query 17175 CCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTACCCG 17234
| || ||||| | | || | ||| | ||||||||| || || |||||||| ||||| |
Sbjct 72 CAACAGGTTTGCGGGAAAATAAGTCTAAAACAACGGCTAGATAGGCCCAGCGATTACC-G 130
Query 17235 TCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCGAACTGCC 17294
||| | ||| ||||| || || |||||||| |||| ||| | || || || ||||| |
Sbjct 131 ACCAAACATACGTCACGTCGCCACACCACACTTGATCTGGTTGAGTTACTGCAAACTGTC 190
Query 17295 GTTCAAG-GTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCGGTAAGTC 17353
| | ||| ||| | ||||| || ||||| || || || | |||| | |
Sbjct 191 GATTAAGCGTATTCGGGGATCGCTACATGCTCTTGTGCAGCTTTCCTATAAGAATGCTTA 250
Query 17354 GGCTGCTGACAGCTGACCAGCCCCAGCTCTTTCATGAG 17391
|||||||||||||| | | ||| |||| | |||| ||
Sbjct 251 GGCTGCTGACAGCTTAATAACCCAAGCTTTCTCATTAG 288
Score = 116 bits (128), Expect = 1e-21
Identities = 194/278 (70%), Gaps = 2/278 (1%)
Strand=Plus/Plus
Query 39740 ATGCCATTTCCAGTGCTTTCATGGTAAGCCTGCTGTCCGGCGAGAACGACATGGCCCAGC 39799
||||||||| || ||||| ||| ||| || || || || || |||| ||||| |
Sbjct 12 ATGCCATTTTCAAAGCTTTACAGGTCAGCTCACTATCTGGTGATAATGACAAAGCCCATC 71
Query 39800 CCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTACCCG 39859
| || ||||| | | || | ||| | ||||||||| || || |||||||| ||||| |
Sbjct 72 CAACAGGTTTGCGGGAAAATAAGTCTAAAACAACGGCTAGATAGGCCCAGCGATTACC-G 130
Query 39860 TCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCGAACTGCC 39919
||| | ||| ||||| || || |||||||| |||| ||| | || || || ||||| |
Sbjct 131 ACCAAACATACGTCACGTCGCCACACCACACTTGATCTGGTTGAGTTACTGCAAACTGTC 190
Query 39920 GTTCAAG-GTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCGGTAAGTC 39978
| | ||| ||| | ||||| || ||||| || || || | |||| | |
Sbjct 191 GATTAAGCGTATTCGGGGATCGCTACATGCTCTTGTGCAGCTTTCCTATAAGAATGCTTA 250
Query 39979 GGCTGCTGACAGCTGACCAGCCCCAGCTCTTTCATGAG 40016
|||||||||||||| | | ||| |||| | |||| ||
Sbjct 251 GGCTGCTGACAGCTTAATAACCCAAGCTTTCTCATTAG 288
>seq508319
Length=243
Score = 87.8 bits (96), Expect = 5e-13
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 39787 GACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCC 39846
||||| ||||| |||||| |||| || || | ||| | ||||| || ||||| |||
Sbjct 174 GACATTGCCCAACCCACTAACTTTCGAGCAAATAAGTCCATCACAACAGCCAGGTAAGCC 115
Query 39847 CAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTC 39906
|| || | || ||||| ||| | || | |||||||||||| || |||| ||||
Sbjct 114 CAACGAGTCCCTGTCCAAATAAACGTTATATCACCGCACCAAACTTGATCCGGCTGACAT 55
Query 39907 ACGGCGAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATG 39947
|| || ||||| |||||||| ||| || || || |||||
Sbjct 54 ACTGCAAACTGGCGTTCAAGTGTGTTCGGTATTGCTACATG 14
Score = 87.8 bits (96), Expect = 5e-13
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 17162 GACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCC 17221
||||| ||||| |||||| |||| || || | ||| | ||||| || ||||| |||
Sbjct 174 GACATTGCCCAACCCACTAACTTTCGAGCAAATAAGTCCATCACAACAGCCAGGTAAGCC 115
Query 17222 CAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTC 17281
|| || | || ||||| ||| | || | |||||||||||| || |||| ||||
Sbjct 114 CAACGAGTCCCTGTCCAAATAAACGTTATATCACCGCACCAAACTTGATCCGGCTGACAT 55
Query 17282 ACGGCGAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATG 17322
|| || ||||| |||||||| ||| || || || |||||
Sbjct 54 ACTGCAAACTGGCGTTCAAGTGTGTTCGGTATTGCTACATG 14
>seq477953
Length=379
Score = 84.2 bits (92), Expect = 6e-12
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 39239 CCACCGTCGAACTCTCTCCAGTTGCTGGACGAAACGTTCTCGGTATCCGGGACGGAATTA 39298
||||||||||||||||| || |||||||||||||||||| | ||| ||| ||||| |
Sbjct 1 CCACCGTCGAACTCTCTACAACTGCTGGACGAAACGTTCTTGCCATCAGGGCTGGAATAA 60
Query 39299 TCCGCGACCAAACAGCACTGAGAACGCTTCAGGA 39332
|| |||||| | || |||| | || |||||||
Sbjct 61 TCAAGGACCAAGCTGCGCTGAAAGCGTTTCAGGA 94
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 131335277161200
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