Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028702.1
Length=38084
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 140 8e-29
>seq512931
Length=538
Score = 140 bits (154), Expect = 8e-29
Identities = 345/522 (66%), Gaps = 31/522 (6%)
Strand=Plus/Plus
Query 12106 GTGAAGTCGGTCGGTATCACCGGCCAGCTTACCGGCTCCCGTGCGGACATTATCATTGCC 12165
|||||||| || ||| | || ||| | || || |||||| ||||| |||||||
Sbjct 28 GTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGTGCTGACATCCTCATTGCG 87
Query 12166 GATGACGTGGAGGTCCCTGGTAACTCCAGCACCCAGACTGCCCGTGACAAGCTCTCGGAA 12225
|||||||| |||||||| || ||||| |||| ||| | || | || | || ||
Sbjct 88 GATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCAAGGGATCACCTTGGCGAG 147
Query 12226 CTGGTCAAGGAGTTCGACGCTATCCTGAAGCCTGATGAGCACTGTGAGGTCATCTACCTG 12285
||||| ||||| ||||| || ||||||||||||| || || | |||||||| ||
Sbjct 148 CTGGTAAAGGAATTCGATGCGATCCTGAAGCCTG------ACGGTACGATCATCTACTTG 201
Query 12286 GGCACGCCCCAGAACGAGCAGAGCCTCTACAACGTGCTGCTGACCCGTGGCTACACGACC 12345
|| || || |||| ||| || |||||||| | || | ||| |||||| ||||
Sbjct 202 GGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCGCGGCTACTCGACG 261
Query 12346 CTCATCTGGCCTGCCCGGTATCCCCGTGAT---GCCAAGCAGCGGGCCAACT---ACGGG 12399
||||||||||| || || || || ||| || | | | || ||| |||
Sbjct 262 ACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTCCTACTGGCACG-- 319
Query 12400 TCCAAGCTGGC-TCCATTCATCGCGGAACGCTACGATGCT-------------GACCCTG 12445
||||| ||| | ||| | | || ||| ||||| ||| |
Sbjct 320 -CCAAG--GGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAGGAGCTGGAAGACGACG 376
Query 12446 AGGGTCTCGCATGGAAGCCTACGGACCCCAAGCGGTTCACGGACAGCGACCTGATCGAAC 12505
|| || ||||||||||| ||||| | || ||| || |||||| || |
Sbjct 377 AGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAGACCTGCGTGAGC 436
Query 12506 GGGAAATCTCCTACGGCAAGGCAGGCTTCGCCCTCCAGTTCATGCTGGACACCAGCCTGA 12565
| ||| |||| || ||||||| |||||||| || ||||||||||| || | | ||| |
Sbjct 437 GCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCAACCCGAACCTTA 496
Query 12566 GCGATGCCGAGAAGTACCCCCTGCGGCTCCGTGACCTGATCG 12607
|||| |||||||||||| || ||| ||||| |||||
Sbjct 497 GCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120987456534504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |