Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028702.1 Length=38084 Score E Sequences producing significant alignments: (Bits) Value seq512931 140 8e-29 >seq512931 Length=538 Score = 140 bits (154), Expect = 8e-29 Identities = 345/522 (66%), Gaps = 31/522 (6%) Strand=Plus/Plus Query 12106 GTGAAGTCGGTCGGTATCACCGGCCAGCTTACCGGCTCCCGTGCGGACATTATCATTGCC 12165 |||||||| || ||| | || ||| | || || |||||| ||||| ||||||| Sbjct 28 GTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGTGCTGACATCCTCATTGCG 87 Query 12166 GATGACGTGGAGGTCCCTGGTAACTCCAGCACCCAGACTGCCCGTGACAAGCTCTCGGAA 12225 |||||||| |||||||| || ||||| |||| ||| | || | || | || || Sbjct 88 GATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCAAGGGATCACCTTGGCGAG 147 Query 12226 CTGGTCAAGGAGTTCGACGCTATCCTGAAGCCTGATGAGCACTGTGAGGTCATCTACCTG 12285 ||||| ||||| ||||| || ||||||||||||| || || | |||||||| || Sbjct 148 CTGGTAAAGGAATTCGATGCGATCCTGAAGCCTG------ACGGTACGATCATCTACTTG 201 Query 12286 GGCACGCCCCAGAACGAGCAGAGCCTCTACAACGTGCTGCTGACCCGTGGCTACACGACC 12345 || || || |||| ||| || |||||||| | || | ||| |||||| |||| Sbjct 202 GGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCGCGGCTACTCGACG 261 Query 12346 CTCATCTGGCCTGCCCGGTATCCCCGTGAT---GCCAAGCAGCGGGCCAACT---ACGGG 12399 ||||||||||| || || || || ||| || | | | || ||| ||| Sbjct 262 ACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTCCTACTGGCACG-- 319 Query 12400 TCCAAGCTGGC-TCCATTCATCGCGGAACGCTACGATGCT-------------GACCCTG 12445 ||||| ||| | ||| | | || ||| ||||| ||| | Sbjct 320 -CCAAG--GGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAGGAGCTGGAAGACGACG 376 Query 12446 AGGGTCTCGCATGGAAGCCTACGGACCCCAAGCGGTTCACGGACAGCGACCTGATCGAAC 12505 || || ||||||||||| ||||| | || ||| || |||||| || | Sbjct 377 AGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAGACCTGCGTGAGC 436 Query 12506 GGGAAATCTCCTACGGCAAGGCAGGCTTCGCCCTCCAGTTCATGCTGGACACCAGCCTGA 12565 | ||| |||| || ||||||| |||||||| || ||||||||||| || | | ||| | Sbjct 437 GCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCAACCCGAACCTTA 496 Query 12566 GCGATGCCGAGAAGTACCCCCTGCGGCTCCGTGACCTGATCG 12607 |||| |||||||||||| || ||| ||||| ||||| Sbjct 497 GCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120987456534504