Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028754.1
Length=120098
Score E
Sequences producing significant alignments: (Bits) Value
seq426744 203 2e-47
seq511551 154 1e-32
seq435060 134 1e-26
seq506238 125 5e-24
>seq426744
Length=341
Score = 203 bits (224), Expect = 2e-47
Identities = 239/315 (76%), Gaps = 10/315 (3%)
Strand=Plus/Plus
Query 98198 ATTAAGATGCAGCGTAAGCACCGGAAACCACACCGTTAGCG--AAGTA-ACGTTGCAGGT 98254
|||| | ||| ||||| | ||| | ||| | ||| ||| | || | |||||| ||||
Sbjct 29 ATTACGCTGCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGT 88
Query 98255 TAACGCGCTGAGTTACGTAGTATGCATCGCGCTGTTTACCAGCTTGGCGCTCACGTTCAA 98314
||| || |||||||||||||||||||| || || ||||||||||| ||||||||||| |
Sbjct 89 TAAGACGTTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTA 148
Query 98315 CAGTAACAGCGCGCTGACGTGGCATTACGAAGTTATCTTTATAAACAATAACTGCGAATT 98374
| |||| || || ||||| || | |||||||| || ||||| ||| |||||
Sbjct 149 CTGTAATAGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATT 208
Query 98375 C--AGCGGAAGCAGCTTTGGCTGGGAAATACTCAGAAACTACAACCGGCAGGCCGTAAAT 98432
| | | || ||||||| |||||||| || | |||||||| ||| | || ||||| ||
Sbjct 209 CTGAACTGA--CAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGAT 266
Query 98433 ACGACCAACCTGACCCTGCAG-TTTAAC-AG-CATCGTTACCAACCTGGGCAACATCCTG 98489
||||||||| || || || || |||||| || ||| |||||| ||| |||||||||
Sbjct 267 ACGACCAACTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTG 326
Query 98490 CCATTCTTCATCTTC 98504
|||||||||||||||
Sbjct 327 CCATTCTTCATCTTC 341
>seq511551
Length=634
Score = 154 bits (170), Expect = 1e-32
Identities = 282/402 (70%), Gaps = 12/402 (3%)
Strand=Plus/Plus
Query 51950 TGCTGTGTATGCTACTGAGCTTACTGAAAAAGAGTGTTATGATGCATTCCAAGCTCTAGA 52009
|||||| ||||| || || | || || |||||| ||||||||| |||||| ||| ||
Sbjct 13 TGCTGTTTATGCAACGAAGATGACAGAGAAAGAGACTTATGATGCTTTCCAAAGTCTTGA 72
Query 52010 GTATGAAACTAATTCATTATTTAACTCTAATGGGCAGA-CCCCTTTTGTTACGCATGGCT 52068
||| |||| ||| | ||| | | ||||| || | |||||||||| ||| || |
Sbjct 73 GTACGAAATTAACACCTTACACACAGCAAATGGACAAAGCCCCTTTTGT-ACGGTAGGTT 131
Query 52069 TTGGATTAGGTCAGGAGTGGGAGGAAAGGATGATTCAGAAAGCCATCCTCCAAAATCGTA 52128
|||| |||||| |||||| | | | ||||||||| ||||||| | ||||
Sbjct 132 TTGGTTTAGGTACTTGTTGGGAGTCTAAGCTAATTCAGAAATCCATCCTTGAGGTGCGTA 191
Query 52129 TTAAAGGTTTAGGTGCTGCTGAGTCAACCCCTATCTTCCCTAAACTAGTATTCT--CAGT 52186
||||||| |||||||| | || || | | |||||||| || ||| || | |
Sbjct 192 TTAAAGGCTTAGGTGCATCAAAGAGGACAGCGGTATTCCCTAAGCT--TATCCTAACTAT 249
Query 52187 TAAAGAAGG-GTTAAATAAAAATCCAGG-CGATCCTAACTACGATATAAAACAGCTAGCA 52244
|||||| || || || | ||| |||| || || ||||| |||| |||||| ||||
Sbjct 250 TAAAGACGGTGTCAACTTTAAA--CAGGAAGACCCAAACTATAATATTAAACAGTTAGCT 307
Query 52245 CTTGAGTGTTCTGCTACCCGTATGTACCCAGACTATT-TAAGCTATGAGAAAGTTGTAGC 52303
|| |||||| | || ||||||||||| || |||| | | ||| || || ||||||
Sbjct 308 CTAGAGTGTGCCAGTAAGCGTATGTACCCTGA-TATTATCAACTACGATAAGATTGTAGA 366
Query 52304 TGTTACTGGTGATTTTAAAGCCCCTATGGGTTGTCGTAGCTT 52345
|||||||||| |||||| || ||||| || | |||||
Sbjct 367 GGTTACTGGTGGTTTTAAGGCAAGCATGGGCTGCAGGAGCTT 408
>seq435060
Length=507
Score = 134 bits (148), Expect = 1e-26
Identities = 316/471 (67%), Gaps = 27/471 (6%)
Strand=Plus/Plus
Query 69780 AAATACCCTGACTTCCACTCAAACATCGCACACATGGTATTTAAACTGACCTGTGAACCA 69839
|| || || ||||||||| ||||| || |||||||| ||||| || | ||| | ||
Sbjct 44 AAGTATCCCGACTTCCACAGTAACATAGCTCACATGGTGTTTAACCTACCTTGTAAGCCT 103
Query 69840 CGTGATGTTAAGAAGCTGTTCCCAGCTCTACGTCAGGCAGCTAAGGCAATTACCTTTGGT 69899
|| |||||||| || |||||||| ||| | ||||| || ||||| || || ||||||
Sbjct 104 GAGGAAGTTAAGAAACTATTCCCAGCCCTAAGGCAGGCTGCGAAGGCGATAACATTTGGT 163
Query 69900 ATTTTGTATGGTTCTGGCCCAGCGAAAGTAGCTCATTCTGTTAACGAAGCTCTTCTGGAA 69959
||| | | ||||| || |||| ||||| | |||||| |||| || |||
Sbjct 164 ATTCTATTCGGTTCAGGAGCAGCATCTGTAGCAGAGCAAGTTAACTTAGCTAAGCTAGAA 223
Query 69960 CAGGCTGCTAAGACAGGCGAACCGTTTGT--TGAATGTACCGTTGCAGATGCGAAGGACT 70017
| || ||| ||| || |||| | || | || |||| | |
Sbjct 224 TTAGGTG--AAG-CAGCTGA-----TTGTACTAAAGAAATCGCCGCAGGT---------T 266
Query 70018 ATATCGAAACTTACTTCGGTCAGTTCCCTCAGCTTAA-GCGTTGGATTGATAAGTGCCAC 70076
| |||||| |||||| | ||||||| ||||| |||| |||||||| || ||
Sbjct 267 ACATCGAAGTGTACTTCAAGCGGTTCCCTAGACTTAAAGCGT-GGATTGATTCTTGTCAT 325
Query 70077 GATCAGATCA---AGAACTTTGGATTCATCTATAGTCACTTTGGTCGTAAGCGTCGTCTG 70133
||| | ||| |||| ||||| || || | ||||| || ||||||||| | |
Sbjct 326 GATGAAATCCGTCAGAAA---GGATTTATATACAACCACTTCGGCCGTAAGCGTAGATTA 382
Query 70134 CACAATATCCACTCCGAAGATCGTGGTGTTCAGGGTGAAGAAATCCGTTCTGGATTTAAC 70193
||||| ||| || ||| | || ||| |||| |||||||||||| ||||||||
Sbjct 383 CACAACATCTCTTCTAGCGATAGAGGCGTTGTAGGTGGAGAAATCCGTTCAGGATTTAAT 442
Query 70194 GCAATCATTCAGTCTGCATCTTCTGATAGCCTGTTGTTAGGTGCTATTGAT 70244
|| ||||| |||||||| || |||||| | | || |||| ||| | |||
Sbjct 443 GCTATCATACAGTCTGCGTCATCTGATCACTTACTGCTAGGAGCTGTAGAT 493
>seq506238
Length=275
Score = 125 bits (138), Expect = 5e-24
Identities = 132/172 (77%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 30107 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAAACGTACA 30166
||||||||||| | | ||||| | ||||||||| | || | || ||||||||| ||
Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111
Query 30167 GCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC- 30225
||||| ||||| ||||| ||||||||||| || ||||||||||| ||||| |||||
Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171
Query 30226 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTC 30276
| || | | ||||||| ||||||||| || |||| || ||||| || ||
Sbjct 172 TCCAATGTT--TCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381728241459898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |