Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028754.1 Length=120098 Score E Sequences producing significant alignments: (Bits) Value seq426744 203 2e-47 seq511551 154 1e-32 seq435060 134 1e-26 seq506238 125 5e-24 >seq426744 Length=341 Score = 203 bits (224), Expect = 2e-47 Identities = 239/315 (76%), Gaps = 10/315 (3%) Strand=Plus/Plus Query 98198 ATTAAGATGCAGCGTAAGCACCGGAAACCACACCGTTAGCG--AAGTA-ACGTTGCAGGT 98254 |||| | ||| ||||| | ||| | ||| | ||| ||| | || | |||||| |||| Sbjct 29 ATTACGCTGCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGT 88 Query 98255 TAACGCGCTGAGTTACGTAGTATGCATCGCGCTGTTTACCAGCTTGGCGCTCACGTTCAA 98314 ||| || |||||||||||||||||||| || || ||||||||||| ||||||||||| | Sbjct 89 TAAGACGTTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTA 148 Query 98315 CAGTAACAGCGCGCTGACGTGGCATTACGAAGTTATCTTTATAAACAATAACTGCGAATT 98374 | |||| || || ||||| || | |||||||| || ||||| ||| ||||| Sbjct 149 CTGTAATAGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATT 208 Query 98375 C--AGCGGAAGCAGCTTTGGCTGGGAAATACTCAGAAACTACAACCGGCAGGCCGTAAAT 98432 | | | || ||||||| |||||||| || | |||||||| ||| | || ||||| || Sbjct 209 CTGAACTGA--CAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGAT 266 Query 98433 ACGACCAACCTGACCCTGCAG-TTTAAC-AG-CATCGTTACCAACCTGGGCAACATCCTG 98489 ||||||||| || || || || |||||| || ||| |||||| ||| ||||||||| Sbjct 267 ACGACCAACTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTG 326 Query 98490 CCATTCTTCATCTTC 98504 ||||||||||||||| Sbjct 327 CCATTCTTCATCTTC 341 >seq511551 Length=634 Score = 154 bits (170), Expect = 1e-32 Identities = 282/402 (70%), Gaps = 12/402 (3%) Strand=Plus/Plus Query 51950 TGCTGTGTATGCTACTGAGCTTACTGAAAAAGAGTGTTATGATGCATTCCAAGCTCTAGA 52009 |||||| ||||| || || | || || |||||| ||||||||| |||||| ||| || Sbjct 13 TGCTGTTTATGCAACGAAGATGACAGAGAAAGAGACTTATGATGCTTTCCAAAGTCTTGA 72 Query 52010 GTATGAAACTAATTCATTATTTAACTCTAATGGGCAGA-CCCCTTTTGTTACGCATGGCT 52068 ||| |||| ||| | ||| | | ||||| || | |||||||||| ||| || | Sbjct 73 GTACGAAATTAACACCTTACACACAGCAAATGGACAAAGCCCCTTTTGT-ACGGTAGGTT 131 Query 52069 TTGGATTAGGTCAGGAGTGGGAGGAAAGGATGATTCAGAAAGCCATCCTCCAAAATCGTA 52128 |||| |||||| |||||| | | | ||||||||| ||||||| | |||| Sbjct 132 TTGGTTTAGGTACTTGTTGGGAGTCTAAGCTAATTCAGAAATCCATCCTTGAGGTGCGTA 191 Query 52129 TTAAAGGTTTAGGTGCTGCTGAGTCAACCCCTATCTTCCCTAAACTAGTATTCT--CAGT 52186 ||||||| |||||||| | || || | | |||||||| || ||| || | | Sbjct 192 TTAAAGGCTTAGGTGCATCAAAGAGGACAGCGGTATTCCCTAAGCT--TATCCTAACTAT 249 Query 52187 TAAAGAAGG-GTTAAATAAAAATCCAGG-CGATCCTAACTACGATATAAAACAGCTAGCA 52244 |||||| || || || | ||| |||| || || ||||| |||| |||||| |||| Sbjct 250 TAAAGACGGTGTCAACTTTAAA--CAGGAAGACCCAAACTATAATATTAAACAGTTAGCT 307 Query 52245 CTTGAGTGTTCTGCTACCCGTATGTACCCAGACTATT-TAAGCTATGAGAAAGTTGTAGC 52303 || |||||| | || ||||||||||| || |||| | | ||| || || |||||| Sbjct 308 CTAGAGTGTGCCAGTAAGCGTATGTACCCTGA-TATTATCAACTACGATAAGATTGTAGA 366 Query 52304 TGTTACTGGTGATTTTAAAGCCCCTATGGGTTGTCGTAGCTT 52345 |||||||||| |||||| || ||||| || | ||||| Sbjct 367 GGTTACTGGTGGTTTTAAGGCAAGCATGGGCTGCAGGAGCTT 408 >seq435060 Length=507 Score = 134 bits (148), Expect = 1e-26 Identities = 316/471 (67%), Gaps = 27/471 (6%) Strand=Plus/Plus Query 69780 AAATACCCTGACTTCCACTCAAACATCGCACACATGGTATTTAAACTGACCTGTGAACCA 69839 || || || ||||||||| ||||| || |||||||| ||||| || | ||| | || Sbjct 44 AAGTATCCCGACTTCCACAGTAACATAGCTCACATGGTGTTTAACCTACCTTGTAAGCCT 103 Query 69840 CGTGATGTTAAGAAGCTGTTCCCAGCTCTACGTCAGGCAGCTAAGGCAATTACCTTTGGT 69899 || |||||||| || |||||||| ||| | ||||| || ||||| || || |||||| Sbjct 104 GAGGAAGTTAAGAAACTATTCCCAGCCCTAAGGCAGGCTGCGAAGGCGATAACATTTGGT 163 Query 69900 ATTTTGTATGGTTCTGGCCCAGCGAAAGTAGCTCATTCTGTTAACGAAGCTCTTCTGGAA 69959 ||| | | ||||| || |||| ||||| | |||||| |||| || ||| Sbjct 164 ATTCTATTCGGTTCAGGAGCAGCATCTGTAGCAGAGCAAGTTAACTTAGCTAAGCTAGAA 223 Query 69960 CAGGCTGCTAAGACAGGCGAACCGTTTGT--TGAATGTACCGTTGCAGATGCGAAGGACT 70017 | || ||| ||| || |||| | || | || |||| | | Sbjct 224 TTAGGTG--AAG-CAGCTGA-----TTGTACTAAAGAAATCGCCGCAGGT---------T 266 Query 70018 ATATCGAAACTTACTTCGGTCAGTTCCCTCAGCTTAA-GCGTTGGATTGATAAGTGCCAC 70076 | |||||| |||||| | ||||||| ||||| |||| |||||||| || || Sbjct 267 ACATCGAAGTGTACTTCAAGCGGTTCCCTAGACTTAAAGCGT-GGATTGATTCTTGTCAT 325 Query 70077 GATCAGATCA---AGAACTTTGGATTCATCTATAGTCACTTTGGTCGTAAGCGTCGTCTG 70133 ||| | ||| |||| ||||| || || | ||||| || ||||||||| | | Sbjct 326 GATGAAATCCGTCAGAAA---GGATTTATATACAACCACTTCGGCCGTAAGCGTAGATTA 382 Query 70134 CACAATATCCACTCCGAAGATCGTGGTGTTCAGGGTGAAGAAATCCGTTCTGGATTTAAC 70193 ||||| ||| || ||| | || ||| |||| |||||||||||| |||||||| Sbjct 383 CACAACATCTCTTCTAGCGATAGAGGCGTTGTAGGTGGAGAAATCCGTTCAGGATTTAAT 442 Query 70194 GCAATCATTCAGTCTGCATCTTCTGATAGCCTGTTGTTAGGTGCTATTGAT 70244 || ||||| |||||||| || |||||| | | || |||| ||| | ||| Sbjct 443 GCTATCATACAGTCTGCGTCATCTGATCACTTACTGCTAGGAGCTGTAGAT 493 >seq506238 Length=275 Score = 125 bits (138), Expect = 5e-24 Identities = 132/172 (77%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 30107 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAAACGTACA 30166 ||||||||||| | | ||||| | ||||||||| | || | || ||||||||| || Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111 Query 30167 GCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC- 30225 ||||| ||||| ||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171 Query 30226 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTC 30276 | || | | ||||||| ||||||||| || |||| || ||||| || || Sbjct 172 TCCAATGTT--TCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381728241459898