Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028772.1 Length=39133 Score E Sequences producing significant alignments: (Bits) Value seq512931 172 1e-38 >seq512931 Length=538 Score = 172 bits (190), Expect = 1e-38 Identities = 366/530 (69%), Gaps = 36/530 (7%) Strand=Plus/Plus Query 36904 CCTGCTCGGCCTGACCACTCTCCTTCGGTGAAGTCCGTAGGTATCACTGGTCAGT-TAAC 36962 |||||||| ||||||||| || |||||||||||||| ||| | ||||| | || | || Sbjct 1 CCTGCTCGTCCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGAC 59 Query 36963 TGGTAGTCGTGCCGATATCATCATCGCGGATGACGTTGAGGTCCCTGGTAACTCCGCCAC 37022 |||||| ||||| || ||| |||| |||||||||||||||||||| || ||||| | ||| Sbjct 60 TGGTAGCCGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCAC 119 Query 37023 TCAGTCGGCCCGTGAGAAGCTCTGGACA-TTGGTCCAAGAGTTCGCCGCACTGTTGAAAC 37081 ||||| || | || | || ||| | |||| | || |||| || | |||| | Sbjct 120 ACAGTCCGCAAGGGATCACCT-TGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGC 178 Query 37082 CTCTGGACACCTCTCGTGTTATCTATCTGGGTACCCCTCAGACCGAGATGACCCTGTATC 37141 || || | | | ||||| |||| ||||| |||||||| |||||||| || Sbjct 179 CT---GA---CGGTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACA 232 Query 37142 GAGAGCTTGAGGACAACCGTGGCTACACTACCATCATCTGGCCTGCTCAGTATCCGAGGA 37201 | || ||||||| |||| |||||| | || | ||||||||||| | || || || Sbjct 233 GGGAACTTGAGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGG 289 Query 37202 CTCGTGAAGAGGACAT---GTACTACGGTGAGCGTATGGCCCCGATGCT-ACGTGAGGA- 37256 | ||| | ||| | || |||| | | | || | | ||| |||| ||| Sbjct 290 AT-GTG--GCTGACCTTGAGTCCTACTGGCACGCCAAGGGCAAG-CGCTCACGTCTGGAC 345 Query 37257 -GTACAACG---AAG--GCTTTGAGA----TTCTAGCTGGTC----AACCAACCGACCCG 37302 ||| | | ||| ||| ||| ||||| || | || || ||||| Sbjct 346 CTTACCATGCTCAAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCT 405 Query 37303 GTGCGGTTCGATAATGAGGACCTTCGAGAGCGTGAGCTTGAGTATGGCAAAGCTGGCTAC 37362 | || |||||| |||| ||||| || ||||| || || |||||||| | ||||| | Sbjct 406 ATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTC 465 Query 37363 ACCCTACAGTTCATGCTTAACCCGAACCTCAGTGACGCCGAGAAGTACCC 37412 | |||||||||||||| ||||||||||| || ||| |||||||||||| Sbjct 466 GCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124323308973780