Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028772.1
Length=39133
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 172 1e-38
>seq512931
Length=538
Score = 172 bits (190), Expect = 1e-38
Identities = 366/530 (69%), Gaps = 36/530 (7%)
Strand=Plus/Plus
Query 36904 CCTGCTCGGCCTGACCACTCTCCTTCGGTGAAGTCCGTAGGTATCACTGGTCAGT-TAAC 36962
|||||||| ||||||||| || |||||||||||||| ||| | ||||| | || | ||
Sbjct 1 CCTGCTCGTCCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGAC 59
Query 36963 TGGTAGTCGTGCCGATATCATCATCGCGGATGACGTTGAGGTCCCTGGTAACTCCGCCAC 37022
|||||| ||||| || ||| |||| |||||||||||||||||||| || ||||| | |||
Sbjct 60 TGGTAGCCGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCAC 119
Query 37023 TCAGTCGGCCCGTGAGAAGCTCTGGACA-TTGGTCCAAGAGTTCGCCGCACTGTTGAAAC 37081
||||| || | || | || ||| | |||| | || |||| || | |||| |
Sbjct 120 ACAGTCCGCAAGGGATCACCT-TGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGC 178
Query 37082 CTCTGGACACCTCTCGTGTTATCTATCTGGGTACCCCTCAGACCGAGATGACCCTGTATC 37141
|| || | | | ||||| |||| ||||| |||||||| |||||||| ||
Sbjct 179 CT---GA---CGGTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACA 232
Query 37142 GAGAGCTTGAGGACAACCGTGGCTACACTACCATCATCTGGCCTGCTCAGTATCCGAGGA 37201
| || ||||||| |||| |||||| | || | ||||||||||| | || || ||
Sbjct 233 GGGAACTTGAGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGG 289
Query 37202 CTCGTGAAGAGGACAT---GTACTACGGTGAGCGTATGGCCCCGATGCT-ACGTGAGGA- 37256
| ||| | ||| | || |||| | | | || | | ||| |||| |||
Sbjct 290 AT-GTG--GCTGACCTTGAGTCCTACTGGCACGCCAAGGGCAAG-CGCTCACGTCTGGAC 345
Query 37257 -GTACAACG---AAG--GCTTTGAGA----TTCTAGCTGGTC----AACCAACCGACCCG 37302
||| | | ||| ||| ||| ||||| || | || || |||||
Sbjct 346 CTTACCATGCTCAAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCT 405
Query 37303 GTGCGGTTCGATAATGAGGACCTTCGAGAGCGTGAGCTTGAGTATGGCAAAGCTGGCTAC 37362
| || |||||| |||| ||||| || ||||| || || |||||||| | ||||| |
Sbjct 406 ATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTC 465
Query 37363 ACCCTACAGTTCATGCTTAACCCGAACCTCAGTGACGCCGAGAAGTACCC 37412
| |||||||||||||| ||||||||||| || ||| ||||||||||||
Sbjct 466 GCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124323308973780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |