Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028795.1 Length=31522 Score E Sequences producing significant alignments: (Bits) Value seq512931 152 1e-32 >seq512931 Length=538 Score = 152 bits (168), Expect = 1e-32 Identities = 353/525 (67%), Gaps = 38/525 (7%) Strand=Plus/Minus Query 16492 AAGGGGTACTTCTCGGCATCACTAAGGTTCGGGTTGAGCATGAACTGCAAAGTGAAGCCA 16551 || |||||||||||| || |||||||||||||||||||||||||| | || ||||||| Sbjct 518 AACGGGTACTTCTCGATGTCGCTAAGGTTCGGGTTGAGCATGAACTGTAGAGCGAAGCCA 459 Query 16552 GCCTTACCGTATTCCAACTCACGCTCCCGGAGGTCTTCCATATCGAAGCGAACGGGGTCA 16611 |||| || ||| | || ||||| || |||||||| |||||| |||| ||||| Sbjct 458 CCCTTGCCATATGAGAGTTCGCGCTCACGCAGGTCTTCATCATCGAATCGAATAGGGTCT 399 Query 16612 GTCGGTTGACCTTGGAGCATCTCGAACCCATCGTTGAACTCTTCGCGGAGCATCG---GG 16668 || || | | ||| ||||| | || | | ||| | |||||| | || Sbjct 398 GTAGGCTTCCAGAACAGCTTCTCG---TCGTCTTCCAGCTCCT---TGAGCATGGTAAGG 345 Query 16669 GCCAGA------CGGTCGCCAT---AGTACAAGTCTTCCTCACGGCTA---------CGC 16710 ||||| || | ||| | || | ||| |||| || | || Sbjct 344 TCCAGACGTGAGCGCTTGCCCTTGGCGTGCCAGTAGGACTCAAGGTCAGCCACATCCCGA 285 Query 16711 GGATAGAGCGCAGGCCAGATGATTGTGGTGTACCCACGGTTATCTTCGAGTTCCTTGTAC 16770 || || | ||||||||||| | || | ||| || ||| || || |||||| |||| Sbjct 284 GGGTATCGTGCAGGCCAGATCGTCGTCGAGTAGCCGCGG---TCCTCAAGTTCCCTGTAG 228 Query 16771 AAGGTCATTTCGGTTTGAGGCGTACCAAGGTATATAACGCGAGAAGTTGGCAGTGGTTTC 16830 | |||||||||||| || || || || | ||| || | || || || || ||| Sbjct 227 AGGGTCATTTCGGTCTGTGGGGTTCCCAAGTAGATGA-TCGTACCGT---CA--GGCTTC 174 Query 16831 AGAAGCGCAGCAAATTCCTGCACCAGAGTCCACAGCTTCTCACGGGCACCTTGAGTTGCG 16890 || | |||| | ||||||| ||||| | || | || | || || || | Sbjct 173 AGGATCGCATCGAATTCCTTTACCAGCTCGCCAAGGTGATCCCTTGCGGACTGTGTGCCA 114 Query 16891 GAGTTAGACGGAATCTCAACGTCATCCGCTATGATGATATCAGCACGGCTACCAGTCA-A 16949 ||||| || | ||||||||||||||| |||| ||| ||||||||||||||||||| | Sbjct 113 GAGTTGCCGGGGACCTCAACGTCATCCGCAATGAGGATGTCAGCACGGCTACCAGTCATA 54 Query 16950 CTGACCAGTGATACCCACCGACTTCACAGACGGAGAGTGGTCAGG 16994 | | ||||| | |||||| |||||||| || || ||||||||| Sbjct 53 CCG-CCAGTAACACCCACGGACTTCACCGAGGGGCTGTGGTCAGG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100120093611216