Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028795.1
Length=31522
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 152 1e-32
>seq512931
Length=538
Score = 152 bits (168), Expect = 1e-32
Identities = 353/525 (67%), Gaps = 38/525 (7%)
Strand=Plus/Minus
Query 16492 AAGGGGTACTTCTCGGCATCACTAAGGTTCGGGTTGAGCATGAACTGCAAAGTGAAGCCA 16551
|| |||||||||||| || |||||||||||||||||||||||||| | || |||||||
Sbjct 518 AACGGGTACTTCTCGATGTCGCTAAGGTTCGGGTTGAGCATGAACTGTAGAGCGAAGCCA 459
Query 16552 GCCTTACCGTATTCCAACTCACGCTCCCGGAGGTCTTCCATATCGAAGCGAACGGGGTCA 16611
|||| || ||| | || ||||| || |||||||| |||||| |||| |||||
Sbjct 458 CCCTTGCCATATGAGAGTTCGCGCTCACGCAGGTCTTCATCATCGAATCGAATAGGGTCT 399
Query 16612 GTCGGTTGACCTTGGAGCATCTCGAACCCATCGTTGAACTCTTCGCGGAGCATCG---GG 16668
|| || | | ||| ||||| | || | | ||| | |||||| | ||
Sbjct 398 GTAGGCTTCCAGAACAGCTTCTCG---TCGTCTTCCAGCTCCT---TGAGCATGGTAAGG 345
Query 16669 GCCAGA------CGGTCGCCAT---AGTACAAGTCTTCCTCACGGCTA---------CGC 16710
||||| || | ||| | || | ||| |||| || | ||
Sbjct 344 TCCAGACGTGAGCGCTTGCCCTTGGCGTGCCAGTAGGACTCAAGGTCAGCCACATCCCGA 285
Query 16711 GGATAGAGCGCAGGCCAGATGATTGTGGTGTACCCACGGTTATCTTCGAGTTCCTTGTAC 16770
|| || | ||||||||||| | || | ||| || ||| || || |||||| ||||
Sbjct 284 GGGTATCGTGCAGGCCAGATCGTCGTCGAGTAGCCGCGG---TCCTCAAGTTCCCTGTAG 228
Query 16771 AAGGTCATTTCGGTTTGAGGCGTACCAAGGTATATAACGCGAGAAGTTGGCAGTGGTTTC 16830
| |||||||||||| || || || || | ||| || | || || || || |||
Sbjct 227 AGGGTCATTTCGGTCTGTGGGGTTCCCAAGTAGATGA-TCGTACCGT---CA--GGCTTC 174
Query 16831 AGAAGCGCAGCAAATTCCTGCACCAGAGTCCACAGCTTCTCACGGGCACCTTGAGTTGCG 16890
|| | |||| | ||||||| ||||| | || | || | || || || |
Sbjct 173 AGGATCGCATCGAATTCCTTTACCAGCTCGCCAAGGTGATCCCTTGCGGACTGTGTGCCA 114
Query 16891 GAGTTAGACGGAATCTCAACGTCATCCGCTATGATGATATCAGCACGGCTACCAGTCA-A 16949
||||| || | ||||||||||||||| |||| ||| ||||||||||||||||||| |
Sbjct 113 GAGTTGCCGGGGACCTCAACGTCATCCGCAATGAGGATGTCAGCACGGCTACCAGTCATA 54
Query 16950 CTGACCAGTGATACCCACCGACTTCACAGACGGAGAGTGGTCAGG 16994
| | ||||| | |||||| |||||||| || || |||||||||
Sbjct 53 CCG-CCAGTAACACCCACGGACTTCACCGAGGGGCTGTGGTCAGG 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 100120093611216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |