Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028800.1
Length=41698
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 158 3e-34
>seq512931
Length=538
Score = 158 bits (174), Expect = 3e-34
Identities = 352/524 (67%), Gaps = 42/524 (8%)
Strand=Plus/Plus
Query 38969 CCGGACCACAGCCCGTCAGTTAAGTCTGTGGGTATTACGGGTCAGCTTACTGGTAGCCGT 39028
|| ||||||||||| || || ||||| |||||| |||| || | ||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69
Query 39029 GCTGATATCATCATTGCGGATGACGTGGAGATTCCCGGTAACTCTGCAACCCAAGGTGCT 39088
||||| ||| |||||||||||||||| ||| | ||||| ||||||| || || ||
Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129
Query 39089 CGTGAGAAACTCTGGACGTTGGTTCAGGAGTTCGCCGCACTGTTGAAGCCTCTACCGACT 39148
| || | || | | |||| |||| |||| || | |||||||| |||
Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GACG 184
Query 39149 AGCCGTGTTATCTATCTGGGGACCCCTCAGACCGAGATGACGCTCTACAAGGAACTTGAG 39208
|| | ||||| |||| ||||| |||||||| ||||| ||||||| ||||||||||
Sbjct 185 GTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAG 243
Query 39209 GACAACCGTGGGTACTCCACCATCATCTGGCCTGCGCAGTATCCTCGCTCCAAAGAGGAA 39268
| |||| || ||||| || | ||||||||||| | || ||||| | | ||
Sbjct 244 G---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG---GGATGTGGCT 297
Query 39269 GA-CTTG-----TACT--------ATGGTGA-------CCGACTGG---CTCCTATGCTC 39304
|| |||| |||| | || | || |||| | | ||||||
Sbjct 298 GACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTC 357
Query 39305 CGTAGTGAGTACGATGAGGACAAAGAGGGTCTCAGTAGCCAACCTACCGACCCGGTTCGA 39364
| ||| || || ||| | || || | | | ||||| ||||| |||||
Sbjct 358 ---AAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGA---AGCCTACAGACCCTATTCGA 411
Query 39365 TTCGACTCTATGGACCTTCAGGAGCGTGAGGTGGAATACGGCAAGGCTGGCTATACGCTT 39424
||||| | ||||| | ||||| || | ||| ||||||| ||||| | ||
Sbjct 412 TTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTA 471
Query 39425 CAGTTCATGCTCAACCCGAACCTCAGTGACGCCGAGAAGTACCC 39468
||||||||||||||||||||||| || ||| ||||||||||||
Sbjct 472 CAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132480088293840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |