Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028800.1 Length=41698 Score E Sequences producing significant alignments: (Bits) Value seq512931 158 3e-34 >seq512931 Length=538 Score = 158 bits (174), Expect = 3e-34 Identities = 352/524 (67%), Gaps = 42/524 (8%) Strand=Plus/Plus Query 38969 CCGGACCACAGCCCGTCAGTTAAGTCTGTGGGTATTACGGGTCAGCTTACTGGTAGCCGT 39028 || ||||||||||| || || ||||| |||||| |||| || | |||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 39029 GCTGATATCATCATTGCGGATGACGTGGAGATTCCCGGTAACTCTGCAACCCAAGGTGCT 39088 ||||| ||| |||||||||||||||| ||| | ||||| ||||||| || || || Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129 Query 39089 CGTGAGAAACTCTGGACGTTGGTTCAGGAGTTCGCCGCACTGTTGAAGCCTCTACCGACT 39148 | || | || | | |||| |||| |||| || | |||||||| ||| Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GACG 184 Query 39149 AGCCGTGTTATCTATCTGGGGACCCCTCAGACCGAGATGACGCTCTACAAGGAACTTGAG 39208 || | ||||| |||| ||||| |||||||| ||||| ||||||| |||||||||| Sbjct 185 GTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAG 243 Query 39209 GACAACCGTGGGTACTCCACCATCATCTGGCCTGCGCAGTATCCTCGCTCCAAAGAGGAA 39268 | |||| || ||||| || | ||||||||||| | || ||||| | | || Sbjct 244 G---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG---GGATGTGGCT 297 Query 39269 GA-CTTG-----TACT--------ATGGTGA-------CCGACTGG---CTCCTATGCTC 39304 || |||| |||| | || | || |||| | | |||||| Sbjct 298 GACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTC 357 Query 39305 CGTAGTGAGTACGATGAGGACAAAGAGGGTCTCAGTAGCCAACCTACCGACCCGGTTCGA 39364 | ||| || || ||| | || || | | | ||||| ||||| ||||| Sbjct 358 ---AAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGA---AGCCTACAGACCCTATTCGA 411 Query 39365 TTCGACTCTATGGACCTTCAGGAGCGTGAGGTGGAATACGGCAAGGCTGGCTATACGCTT 39424 ||||| | ||||| | ||||| || | ||| ||||||| ||||| | || Sbjct 412 TTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTA 471 Query 39425 CAGTTCATGCTCAACCCGAACCTCAGTGACGCCGAGAAGTACCC 39468 ||||||||||||||||||||||| || ||| |||||||||||| Sbjct 472 CAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132480088293840