Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028820.1 Length=162101 Score E Sequences producing significant alignments: (Bits) Value seq449735 176 5e-39 >seq449735 Length=3187 Score = 176 bits (194), Expect = 5e-39 Identities = 324/468 (69%), Gaps = 14/468 (3%) Strand=Plus/Minus Query 140122 GGGCTGAACAACGTGATGTAATCGTTTTTAATCAGACGTTCAATCATGAGGTCGTTAATT 140181 ||||| ||||| || ||||| |||| |||||| | ||| ||| || | |||| Sbjct 488 GGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAAC 429 Query 140182 TGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAGT 140241 || || || ||||||| || || | ||||| |||||||| || || || || ||| Sbjct 428 TGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGT 369 Query 140242 ACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAGTACAAAGTAGCTGCGCCACCG 140301 || | ||||||||||||||| | |||||||| ||| ||| |||| || |||||||| || Sbjct 368 ACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCA 309 Query 140302 CGAATGCCGCCTTGAGAACAAGATTTAACAGAAGCT---AAGTGAGTTTTCCAGAATGGA 140358 || | |||||||| ||||| |||||| | | | ||||| || | || ||| Sbjct 308 CGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTG---CTTATAAAAAGGA 252 Query 140359 ATAACGCCTGTATG--ACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCACGATACA 140416 ||| || ||||| ||| |||| ||| || ||| | ||| |||||| Sbjct 251 ATACAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGC 194 Query 140417 TTCCAGCGTTAACACCAATACCGGCACGTTTGCTGATA--TATTTGATGATTGCTTTGTT 140474 || ||||||| ||||| |||||||| |||| |||| ||||| | ||||| Sbjct 193 GACCTGCGTTAATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAATTGCAGACGA 136 Query 140475 TACTGCATTAATACTGTCAAGACTATCGCCGCCTTCAATAACAACGCAAGAACTGAACTG 140534 || ||||| ||||| || ||||| | || || | || || || || ||||| Sbjct 135 GGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTG 76 Query 140535 GCGAGTCGGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAAT 140582 ||| || || ||||| ||||| ||||||||||| ||||| || ||||| Sbjct 75 GCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515188664815120