Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028820.1
Length=162101
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 176 5e-39
>seq449735
Length=3187
Score = 176 bits (194), Expect = 5e-39
Identities = 324/468 (69%), Gaps = 14/468 (3%)
Strand=Plus/Minus
Query 140122 GGGCTGAACAACGTGATGTAATCGTTTTTAATCAGACGTTCAATCATGAGGTCGTTAATT 140181
||||| ||||| || ||||| |||| |||||| | ||| ||| || | ||||
Sbjct 488 GGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAAC 429
Query 140182 TGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAGT 140241
|| || || ||||||| || || | ||||| |||||||| || || || || |||
Sbjct 428 TGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGT 369
Query 140242 ACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAGTACAAAGTAGCTGCGCCACCG 140301
|| | ||||||||||||||| | |||||||| ||| ||| |||| || |||||||| ||
Sbjct 368 ACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCA 309
Query 140302 CGAATGCCGCCTTGAGAACAAGATTTAACAGAAGCT---AAGTGAGTTTTCCAGAATGGA 140358
|| | |||||||| ||||| |||||| | | | ||||| || | || |||
Sbjct 308 CGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTG---CTTATAAAAAGGA 252
Query 140359 ATAACGCCTGTATG--ACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCACGATACA 140416
||| || ||||| ||| |||| ||| || ||| | ||| ||||||
Sbjct 251 ATACAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGC 194
Query 140417 TTCCAGCGTTAACACCAATACCGGCACGTTTGCTGATA--TATTTGATGATTGCTTTGTT 140474
|| ||||||| ||||| |||||||| |||| |||| ||||| | |||||
Sbjct 193 GACCTGCGTTAATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAATTGCAGACGA 136
Query 140475 TACTGCATTAATACTGTCAAGACTATCGCCGCCTTCAATAACAACGCAAGAACTGAACTG 140534
|| ||||| ||||| || ||||| | || || | || || || || |||||
Sbjct 135 GGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTG 76
Query 140535 GCGAGTCGGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAAT 140582
||| || || ||||| ||||| ||||||||||| ||||| || |||||
Sbjct 75 GCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515188664815120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |