Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028822.1 Length=40829 Score E Sequences producing significant alignments: (Bits) Value seq512931 172 1e-38 >seq512931 Length=538 Score = 172 bits (190), Expect = 1e-38 Identities = 359/522 (69%), Gaps = 36/522 (7%) Strand=Plus/Minus Query 38950 CGGGTACTTCTCGGCATCACTAAGGTTCGGGTTAAGCATGAACTGAAGCGTGTAGCCAGC 39009 ||||||||||||| || |||||||||||||| ||||||||||| || | | ||||| | Sbjct 516 CGGGTACTTCTCGATGTCGCTAAGGTTCGGGTTGAGCATGAACTGTAGAGCGAAGCCACC 457 Query 39010 TTTGCCATATTCGAGTTCACGTTCACGGAGGTCATCCATGTCGAATCGAATAGGGTCAGT 39069 ||||||||| |||||| || ||||| ||||| || ||||||||||||||||| || Sbjct 456 CTTGCCATATGAGAGTTCGCGCTCACGCAGGTCTTCATCATCGAATCGAATAGGGTCTGT 397 Query 39070 AGGTTGACCACGA-AGTAACTCGAAGCCTT-CATCGTATTCAGCCT--TAAGCATCGGAG 39125 ||| | ||| | || |||| | ||| || | || ||| | |||| | || Sbjct 396 AGGCT-TCCAGAACAGCTTCTCGTCGTCTTCCAGCTCCTTGAGCATGGTAAGGTCCAGAC 338 Query 39126 CCAAGCGGTCCCCAT---------AGTAGAGAGCC----TCAGCATCATTACGTGGATAC 39172 |||| | || | ||||| || | ||||| ||| || || || Sbjct 337 GTGAGCGCTTGCCCTTGGCGTGCCAGTAG-GACTCAAGGTCAGCCACATCCCGAGGGTAT 279 Query 39173 TGTGCAGGCCAGATTACCGTACTGTACCCTTTGTTATCCTCAAGTTCCTTGTAGAGCGTC 39232 ||||||||||||| ||| ||| || | |||||||||||| ||||||| ||| Sbjct 278 CGTGCAGGCCAGATCGTCGTCGAGTAGCC---GCGGTCCTCAAGTTCCCTGTAGAGGGTC 222 Query 39233 ATCTCGGTTTGAGGTGTGCCAAGGTAGATAACACGAGAGGTAGGCAGCGGCTTAAGTAAT 39292 || ||||| || || || || | |||||| | || || || ||||| || | Sbjct 221 ATTTCGGTCTGTGGGGTTCCCAAGTAGATGA-TCGTACCGT---CA--GGCTTCAGGATC 168 Query 39293 GCAGCGAACTCAGTTACCAACGTCCAGAGCTTCTCACGAGCAGAACTCGT---AGAGCTA 39349 ||| |||| || |||||| | | || | || | || || || |||| Sbjct 167 GCATCGAATTCCTTTACCAGCTCGCCAAGGTGATCCCTTGCGGACTGTGTGCCAGAG--- 111 Query 39350 TTACCGGGAACCTCAACGTCATCTGCGATAATAATGTCAGCACGGCTACCAGTTA-ACTG 39408 || ||||| |||||||||||||| || || | |||||||||||||||||||| | || | Sbjct 110 TTGCCGGGGACCTCAACGTCATCCGCAATGAGGATGTCAGCACGGCTACCAGTCATACCG 51 Query 39409 ACCAGTAATACCTACAGACTTCACAGAGGGTGAGTGGTCGGG 39450 ||||||| ||| || |||||||| ||||| |||||| || Sbjct 50 -CCAGTAACACCCACGGACTTCACCGAGGGGCTGTGGTCAGG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129716641420884