Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028822.1
Length=40829
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 172 1e-38
>seq512931
Length=538
Score = 172 bits (190), Expect = 1e-38
Identities = 359/522 (69%), Gaps = 36/522 (7%)
Strand=Plus/Minus
Query 38950 CGGGTACTTCTCGGCATCACTAAGGTTCGGGTTAAGCATGAACTGAAGCGTGTAGCCAGC 39009
||||||||||||| || |||||||||||||| ||||||||||| || | | ||||| |
Sbjct 516 CGGGTACTTCTCGATGTCGCTAAGGTTCGGGTTGAGCATGAACTGTAGAGCGAAGCCACC 457
Query 39010 TTTGCCATATTCGAGTTCACGTTCACGGAGGTCATCCATGTCGAATCGAATAGGGTCAGT 39069
||||||||| |||||| || ||||| ||||| || ||||||||||||||||| ||
Sbjct 456 CTTGCCATATGAGAGTTCGCGCTCACGCAGGTCTTCATCATCGAATCGAATAGGGTCTGT 397
Query 39070 AGGTTGACCACGA-AGTAACTCGAAGCCTT-CATCGTATTCAGCCT--TAAGCATCGGAG 39125
||| | ||| | || |||| | ||| || | || ||| | |||| | ||
Sbjct 396 AGGCT-TCCAGAACAGCTTCTCGTCGTCTTCCAGCTCCTTGAGCATGGTAAGGTCCAGAC 338
Query 39126 CCAAGCGGTCCCCAT---------AGTAGAGAGCC----TCAGCATCATTACGTGGATAC 39172
|||| | || | ||||| || | ||||| ||| || || ||
Sbjct 337 GTGAGCGCTTGCCCTTGGCGTGCCAGTAG-GACTCAAGGTCAGCCACATCCCGAGGGTAT 279
Query 39173 TGTGCAGGCCAGATTACCGTACTGTACCCTTTGTTATCCTCAAGTTCCTTGTAGAGCGTC 39232
||||||||||||| ||| ||| || | |||||||||||| ||||||| |||
Sbjct 278 CGTGCAGGCCAGATCGTCGTCGAGTAGCC---GCGGTCCTCAAGTTCCCTGTAGAGGGTC 222
Query 39233 ATCTCGGTTTGAGGTGTGCCAAGGTAGATAACACGAGAGGTAGGCAGCGGCTTAAGTAAT 39292
|| ||||| || || || || | |||||| | || || || ||||| || |
Sbjct 221 ATTTCGGTCTGTGGGGTTCCCAAGTAGATGA-TCGTACCGT---CA--GGCTTCAGGATC 168
Query 39293 GCAGCGAACTCAGTTACCAACGTCCAGAGCTTCTCACGAGCAGAACTCGT---AGAGCTA 39349
||| |||| || |||||| | | || | || | || || || ||||
Sbjct 167 GCATCGAATTCCTTTACCAGCTCGCCAAGGTGATCCCTTGCGGACTGTGTGCCAGAG--- 111
Query 39350 TTACCGGGAACCTCAACGTCATCTGCGATAATAATGTCAGCACGGCTACCAGTTA-ACTG 39408
|| ||||| |||||||||||||| || || | |||||||||||||||||||| | || |
Sbjct 110 TTGCCGGGGACCTCAACGTCATCCGCAATGAGGATGTCAGCACGGCTACCAGTCATACCG 51
Query 39409 ACCAGTAATACCTACAGACTTCACAGAGGGTGAGTGGTCGGG 39450
||||||| ||| || |||||||| ||||| |||||| ||
Sbjct 50 -CCAGTAACACCCACGGACTTCACCGAGGGGCTGTGGTCAGG 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129716641420884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |