Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028827.1
Length=50165
Score E
Sequences producing significant alignments: (Bits) Value
seq498792 123 8e-24
seq479375 89.7 2e-13
seq471061 84.2 7e-12
>seq498792
Length=554
Score = 123 bits (136), Expect = 8e-24
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 40194 GCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGAT 40253
|||| || || || || ||||| ||||| |||||||| | || ||| ||||| || |
Sbjct 1 GCATCGATACCCGTTCCGGGTTAAGGAATCGCTCGAACAGCAGGTCGTATTCCAGAGGGT 60
Query 40254 CGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAG 40313
| ||||| || ||| | ||||| |||||||| ||||| |||| || || ||||
Sbjct 61 CAAGGTCAGTAATCTTTTGCACATAGGCCACCAGCGACCCGGCACCCGAACCACGGCCAG 120
Query 40314 GACCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGT 40373
|||| || |||||||| ||||||||| ||| ||||| |||| ||||||||
Sbjct 121 GACCTACTGGTACGCCGTTACTCTTGGCCCACTGGATAAAGTCCATCACGATCAGGAAGT 180
Query 40374 AGGACGGGAAGCCCATCTGGATGATCATGTCGATCTCG 40411
| |||||| ||||||||||| || || || | ||||
Sbjct 181 AACCCGGGAACCCCATCTGGATAATGATATCCAGCTCG 218
>seq479375
Length=664
Score = 89.7 bits (98), Expect = 2e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 40175 AAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40234
||||||| ||| | ||||||||||| || || || ||||||| ||| || ||||| |
Sbjct 94 AAGTCGACGTCGAAATCGGGCATGGATACACGTTCAGGGTTCAAGAAACGTTCGAACAGT 153
Query 40235 AGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAGCGAACCG 40294
| ||| || |||||||| | |||||| || || ||| ||||| | ||| ||
Sbjct 154 AAATCGTATTCTAGTGGATCTAAGTCGGTAATTTTAAGCGCGTATGCGACTAACGATCCC 213
Query 40295 GCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAG 40354
|| | || || || || ||||| || | |||||| || ||| |||| || ||
Sbjct 214 GCACCAGAACCACGGCCGGGACCAACTGGAATGCCGTTGTCTTTGCCCCACTGAATAAAC 273
Query 40355 TCGGCGACGACCAGGAAGTAGGACGGGAAGCCCATCTGG 40393
|| |||| |||||||| ||||| |||||||||
Sbjct 274 TCCATCACGATAAGGAAGTAACCGGGGAAACCCATCTGG 312
>seq471061
Length=546
Score = 84.2 bits (92), Expect = 7e-12
Identities = 149/216 (69%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 40175 AAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCT-CGAAGAT 40233
||||| || || | |||||||||||||| ||||| ||||| | || |||| | || |
Sbjct 60 AAGTCAATATCGAAATCGGGCATGGACACACGCTCAGGGTTTAAAAAGCGCTACAAATAA 119
Query 40234 GAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAGCGAACC 40293
| ||| | | || ||||||||||| || ||| | || || || || || ||
Sbjct 120 TAAGTCGTAATGAATAGGGTCGAGGTCGGTAATATTGAGCGAATAAGCAACGAGTGAGCC 179
Query 40294 GGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAA 40353
|| | || || || ||||||||||| ||||| || | || ||||| | ||| ||
Sbjct 180 TGCACCAGAACCACGACCAGGACCGACTGGTACGCCATTGGCTTTTGCCCAACGGATAAA 239
Query 40354 GTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCAT 40389
||| ||||| |||||||| || ||||||||
Sbjct 240 GTCCATGACGATGAGGAAGTAACCAGGAAAGCCCAT 275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159405410127348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |