Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028847.1 Length=170527 Score E Sequences producing significant alignments: (Bits) Value seq449735 179 4e-40 seq509673 122 9e-23 >seq449735 Length=3187 Score = 179 bits (198), Expect = 4e-40 Identities = 348/511 (68%), Gaps = 7/511 (1%) Strand=Plus/Minus Query 143818 GTCTTGGTCTTCGAAATAAGAATAGTAAAGCTCACCACCCATTTCATGAGGACTAAACAA 143877 |||||||||||| ||| | | || |||||| || || ||| || |||||||| Sbjct 534 GTCTTGGTCTTCAAAAAATGCATCGTAAAGG---CCTGGCACATCAGAGGGGCTAAACAA 478 Query 143878 CGTGATGTAATCATTTTTACCGAAACGTTCCATCATAAGGTCGTTCATCTGGATTCCGTA 143937 || ||||| || | |||| ||||| ||| || | || | ||| | ||||| Sbjct 477 GGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTA 418 Query 143938 GTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTTTTTCAGAACGAGCAGATT 143997 || | ||| || | ||||| ||||| || || ||| ||||| || || | ||| || Sbjct 417 ATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTT 358 Query 143998 TTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCA 144055 ||| ||||| |||||||||| || || | ||| || || ||||||||||| | || Sbjct 357 TTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCG 300 Query 144056 CCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTA 144115 ||||| ||||| |||||| || || || || || || | || |||||| ||| ||| Sbjct 299 CCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTA 240 Query 144116 TGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATA 144175 || | ||||||| ||| ||| | ||| |||||||| ||| |||| || Sbjct 239 TGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATG 180 Query 144176 CCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTAGCAGTTTTGTTAATAGAT 144235 ||||| |||||||||| || | ||||| || |||| | || |||||| || Sbjct 179 CCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAA 120 Query 144236 TTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTGACGGGTTGGTGTACGT 144295 | || |||||| || || | ||||| || ||||| || || ||||| ||||| Sbjct 119 TCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGA 60 Query 144296 GCTCCAGCCATAATAGGAGTTGGTAATGAAA 144326 | || |||||||| || || |||| ||||| Sbjct 59 ACACCTGCCATAATTGGCGTAGGTAGTGAAA 29 >seq509673 Length=441 Score = 122 bits (134), Expect = 9e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 143933 CCGTAGTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTTTTTCAGAACGAGC 143992 ||||| |||||||| || | |||||| || || || || ||| |||||||| || | Sbjct 234 CCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGTACCAAT 293 Query 143993 AGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATT 144052 | |||||||| |||||||| | || ||| | || || || |||||||||| Sbjct 294 AATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCACGGACG 353 Query 144053 CCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCG 144112 || |||||||| || ||||||||||||| ||||| |||| ||||||| ||| ||| Sbjct 354 CCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATACAACCC 413 Query 144113 GTATGCTTGACTTCGCC 144129 ||||||| ||||||| Sbjct 414 GTATGCTGCGCTTCGCC 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541974749621040