Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028847.1
Length=170527
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 179 4e-40
seq509673 122 9e-23
>seq449735
Length=3187
Score = 179 bits (198), Expect = 4e-40
Identities = 348/511 (68%), Gaps = 7/511 (1%)
Strand=Plus/Minus
Query 143818 GTCTTGGTCTTCGAAATAAGAATAGTAAAGCTCACCACCCATTTCATGAGGACTAAACAA 143877
|||||||||||| ||| | | || |||||| || || ||| || ||||||||
Sbjct 534 GTCTTGGTCTTCAAAAAATGCATCGTAAAGG---CCTGGCACATCAGAGGGGCTAAACAA 478
Query 143878 CGTGATGTAATCATTTTTACCGAAACGTTCCATCATAAGGTCGTTCATCTGGATTCCGTA 143937
|| ||||| || | |||| ||||| ||| || | || | ||| | |||||
Sbjct 477 GGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTA 418
Query 143938 GTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTTTTTCAGAACGAGCAGATT 143997
|| | ||| || | ||||| ||||| || || ||| ||||| || || | ||| ||
Sbjct 417 ATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTT 358
Query 143998 TTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCA 144055
||| ||||| |||||||||| || || | ||| || || ||||||||||| | ||
Sbjct 357 TTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCG 300
Query 144056 CCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTA 144115
||||| ||||| |||||| || || || || || || | || |||||| ||| |||
Sbjct 299 CCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTA 240
Query 144116 TGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATA 144175
|| | ||||||| ||| ||| | ||| |||||||| ||| |||| ||
Sbjct 239 TGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATG 180
Query 144176 CCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTAGCAGTTTTGTTAATAGAT 144235
||||| |||||||||| || | ||||| || |||| | || |||||| ||
Sbjct 179 CCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAA 120
Query 144236 TTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTGACGGGTTGGTGTACGT 144295
| || |||||| || || | ||||| || ||||| || || ||||| |||||
Sbjct 119 TCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGA 60
Query 144296 GCTCCAGCCATAATAGGAGTTGGTAATGAAA 144326
| || |||||||| || || |||| |||||
Sbjct 59 ACACCTGCCATAATTGGCGTAGGTAGTGAAA 29
>seq509673
Length=441
Score = 122 bits (134), Expect = 9e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 143933 CCGTAGTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTTTTTCAGAACGAGC 143992
||||| |||||||| || | |||||| || || || || ||| |||||||| || |
Sbjct 234 CCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGTACCAAT 293
Query 143993 AGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATT 144052
| |||||||| |||||||| | || ||| | || || || ||||||||||
Sbjct 294 AATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCACGGACG 353
Query 144053 CCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCG 144112
|| |||||||| || ||||||||||||| ||||| |||| ||||||| ||| |||
Sbjct 354 CCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATACAACCC 413
Query 144113 GTATGCTTGACTTCGCC 144129
||||||| |||||||
Sbjct 414 GTATGCTGCGCTTCGCC 430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541974749621040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |