Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028848.1 Length=41805 Score E Sequences producing significant alignments: (Bits) Value seq516303 131 4e-26 >seq516303 Length=336 Score = 131 bits (144), Expect = 4e-26 Identities = 227/329 (69%), Gaps = 1/329 (0%) Strand=Plus/Minus Query 19830 GAGGCTACCGAGGAAGAATTAGATCAGTTCCAATTCTGGAAAGGTTTAATGAGTTCATGG 19889 ||||| | |||| || || || |||||| | ||||||||| |||||| | ||| Sbjct 329 GAGGCAAGCGAGTCTGAGTTGGAACAGTTCAAGTTCTGGAAAACCCAGATGAGTGCTTGG 270 Query 19890 TATACACAAGAAGCTAAACGTGTTGGTCGTCAACATGGTATCTTAAGTCGTATTCAAGAA 19949 || || || |||||| |||||||| |||||| | ||| | ||| Sbjct 269 TACACTGCTGAGAACAAACGTAAGGGTCGTCATGTAGGTATCCTGAGTAAGCTCACAGAG 210 Query 19950 TTGGTTAAATATCAGGACGAAGAACGTTTATACTTTCCAACATTTATTGATTGGAGAGGT 20009 || | | ||||| ||||| | | | ||||| ||||| |||||||||||| | || Sbjct 209 TTAGCTCGTTATCAAGACGAGGTAGCCCTGTACTTCCCAACCTTTATTGATTGGCGTGGA 150 Query 20010 CGTCTTTATTTTCGCAGTAGTATCAACCCACAATCGAATGATTGTATTAAAGGTTGTCTT 20069 || | || ||| | |||| | || ||||| || | ||| | |||||||||||| Sbjct 149 CGATTGTACTTTAGAAGTAACTTGAATCCACAGTCATCT-ATTCAGTCAAAGGTTGTCTT 91 Query 20070 GAATTTGCAGAAGGTAAACCTCTAGGTAAAACAGGACTTAAATGGTTAAAGATTCATGTT 20129 || || || || ||||||| ||||||| | || |||| |||||||| |||||| Sbjct 90 GAGTTCGCTGAGGGTAAACGTCTAGGTTCAGATGGTCTTATGTGGTTAAAAGCTCATGTA 31 Query 20130 GCGAACTGCTGTGGTTACGATAAACATGA 20158 || |||||||||||||| |||||||| || Sbjct 30 GCTAACTGCTGTGGTTATGATAAACACGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132820351602708