Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028863.1
Length=40477
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 187 6e-43
>seq512931
Length=538
Score = 187 bits (206), Expect = 6e-43
Identities = 368/531 (69%), Gaps = 54/531 (10%)
Strand=Plus/Plus
Query 1990 CCCGACCACTCACCCTCTGTGAAGTCTGTGGGTATCACTGGTCAGT-TAACTGGTAGCCG 2048
|| |||||| ||||| |||||||| |||||| | ||||| | || | |||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 2049 TGCTGACATCATCATTGCAGATGACGTTGAGGTTCCCGGCAATAGCTCT---ACGAGTTC 2105
|||||||||| ||||||| |||||||||||||| |||||||| |||| || ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAA---CTCTGGCACACAGTC 125
Query 2106 GGCCCGTGAGAAGCTCTGGACGTTGGTAACTGAGTTTGCTGCGTTACTTAAGCCACTGCC 2165
|| | || | || | | |||||| || || | |||| | || ||||| ||
Sbjct 126 CGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TG-- 181
Query 2166 TACCTCTCGTGTTATCTACCTTGGCACACCTCAAACCGAGATGACGCTCTACAAGGAACT 2225
|| || | |||||| | || || || || ||||| ||||| ||||||| ||||||
Sbjct 182 -ACGGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACT 239
Query 2226 TGAGGATAACAAAGGGTACAGCACTGTAATCTGGCCTGCACAGTATCCACGTAATGACGC 2285
|||||| | || ||| || ||||||||||||| || || || ||| ||
Sbjct 240 TGAGGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGC 296
Query 2286 TGA----GGCTCTCTACT---------ATGGGGACCGCT------TGGCTC---CGATGC 2323
||| | || ||||| | || | |||| ||| | | ||||
Sbjct 297 TGACCTTGAGTC-CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGC 355
Query 2324 TTAAGG--CTG-AATACGATGA-AGGCTTTGAGTTACTTCGTGGTCAACCTACTGACCCT 2379
| |||| ||| || |||| || | ||| | || ||| | ||||| ||||||
Sbjct 356 TCAAGGAGCTGGAAGACGACGAGAAGCTGT--------TC-TGGA-AGCCTACAGACCCT 405
Query 2380 ATTCGATTCGATATGGATGACCTCCGTGAACGTGAACTCGAATATGGCAAAGCTGGCTAC 2439
|||||||||||| || ||||| ||||| || |||||| ||||||||| | ||||| |
Sbjct 406 ATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTC 465
Query 2440 ACGCTTCAGTTCATGCTTAACCCGAACCTTAGTGATGCCGAGAAGTACCCG 2490
| || ||||||||||| |||||||||||||| || |||||||||||||
Sbjct 466 GCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCG 516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128597270535636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |