Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028863.1 Length=40477 Score E Sequences producing significant alignments: (Bits) Value seq512931 187 6e-43 >seq512931 Length=538 Score = 187 bits (206), Expect = 6e-43 Identities = 368/531 (69%), Gaps = 54/531 (10%) Strand=Plus/Plus Query 1990 CCCGACCACTCACCCTCTGTGAAGTCTGTGGGTATCACTGGTCAGT-TAACTGGTAGCCG 2048 || |||||| ||||| |||||||| |||||| | ||||| | || | ||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 2049 TGCTGACATCATCATTGCAGATGACGTTGAGGTTCCCGGCAATAGCTCT---ACGAGTTC 2105 |||||||||| ||||||| |||||||||||||| |||||||| |||| || || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAA---CTCTGGCACACAGTC 125 Query 2106 GGCCCGTGAGAAGCTCTGGACGTTGGTAACTGAGTTTGCTGCGTTACTTAAGCCACTGCC 2165 || | || | || | | |||||| || || | |||| | || ||||| || Sbjct 126 CGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TG-- 181 Query 2166 TACCTCTCGTGTTATCTACCTTGGCACACCTCAAACCGAGATGACGCTCTACAAGGAACT 2225 || || | |||||| | || || || || ||||| ||||| ||||||| |||||| Sbjct 182 -ACGGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACT 239 Query 2226 TGAGGATAACAAAGGGTACAGCACTGTAATCTGGCCTGCACAGTATCCACGTAATGACGC 2285 |||||| | || ||| || ||||||||||||| || || || ||| || Sbjct 240 TGAGGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGC 296 Query 2286 TGA----GGCTCTCTACT---------ATGGGGACCGCT------TGGCTC---CGATGC 2323 ||| | || ||||| | || | |||| ||| | | |||| Sbjct 297 TGACCTTGAGTC-CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGC 355 Query 2324 TTAAGG--CTG-AATACGATGA-AGGCTTTGAGTTACTTCGTGGTCAACCTACTGACCCT 2379 | |||| ||| || |||| || | ||| | || ||| | ||||| |||||| Sbjct 356 TCAAGGAGCTGGAAGACGACGAGAAGCTGT--------TC-TGGA-AGCCTACAGACCCT 405 Query 2380 ATTCGATTCGATATGGATGACCTCCGTGAACGTGAACTCGAATATGGCAAAGCTGGCTAC 2439 |||||||||||| || ||||| ||||| || |||||| ||||||||| | ||||| | Sbjct 406 ATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTC 465 Query 2440 ACGCTTCAGTTCATGCTTAACCCGAACCTTAGTGATGCCGAGAAGTACCCG 2490 | || ||||||||||| |||||||||||||| || ||||||||||||| Sbjct 466 GCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCG 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128597270535636