Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028880.1
Length=38625
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 161 2e-35
>seq512931
Length=538
Score = 161 bits (178), Expect = 2e-35
Identities = 355/525 (68%), Gaps = 38/525 (7%)
Strand=Plus/Plus
Query 36224 CCTGACCACTCTCCGTCTGTGAAGTCGGTGGGTATCACTGGTCAGT-TGACTGGTAGCCG 36282
||||||||| || || |||||||| |||||| | ||||| | || |||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 36283 TGCTGATATCATCATAGCGGATGACGTTGAGATTCCGTCTAACTCCGCAACTCAAGGTGC 36342
|||||| ||| |||| ||||||||||||||| | || ||||| | || || ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 36343 CCGTGAGAAGCTGTGGACTCTGGTGCAGGAATTTGCTGCGCTTCTGAAACCACTGCCTAC 36402
| || | || | ||||| ||||||| | |||| | ||||| || || ||
Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TG---AC 183
Query 36403 TTCTCGCGTTATCTACCTTGGCACGCCTCAAACCGAAATGACCTTGTACAAGGAACTCGA 36462
|| | |||||| | || || || || |||||||||||| | |||| |||||| ||
Sbjct 184 GGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGA 242
Query 36463 AGATAACCGTGGGTACACCACAATCATCTGGCCTGCGCTCTATCCGCG---------TAG 36513
|| ||| || ||| | || | ||||||||||| | || || || |
Sbjct 243 GGA---CCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGA 299
Query 36514 CCGTGAGGAAGACTTGTACT---ATGGCGACCG------TCTGGCCC---CGATGCTCCG 36561
|| |||| ||| | || | ||| | || ||||| || | ||||||
Sbjct 300 CCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCA- 358
Query 36562 CGAAGAGTTCAACGATGGGTTCGAGATGCTCCAAGGTCAACCAACTGACCCAGTGCGCTT 36621
| ||| | | || | ||||| ||| | | || || ||||| | || ||
Sbjct 359 --AGGAGCTGGAAGACGA---CGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATT 413
Query 36622 CGATATGGAAGACCTGCGTGAGCGTGAGTTGGAATATGGTAAGGCTGGCTTCACTTTGCA 36681
|||| ||||||||||||||||| || | |||||| |||| ||||||| || | ||
Sbjct 414 CGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACA 473
Query 36682 GTTCATGCTTAACCCGAACCTTAGTGATGCCGAGAAGTACCCATT 36726
||||||||| |||||||||||||| || |||||||||||| ||
Sbjct 474 GTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTT 518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122707853264388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |