Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028881.1
Length=170473
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 190 2e-43
seq509673 116 4e-21
>seq449735
Length=3187
Score = 190 bits (210), Expect = 2e-43
Identities = 523/795 (66%), Gaps = 20/795 (3%)
Strand=Plus/Minus
Query 142484 AATGCAGACAGAGTACATAACCCGATTTCAGCTTCAGGGCTATTTACGTCAT-------- 142535
|||||||| || ||||||| | | ||||| |||| | ||||||| ||
Sbjct 815 AATGCAGAGAGTGTACATAGCGCAATTTCGCCTTCTTCGTCGTTTACGTTATCCAACGGC 756
Query 142536 -TAGTCGGGATTGCAATTTCACAACACAAGTTGCTCTGACGAATAGGAGCACGTTCACGA 142594
|||| || | ||||||||| |||| || || || |||||||| || || | |
Sbjct 755 TTAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCA 696
Query 142595 ATAAATGGGGTGAAGTTGTTAGTGTTATCTACGAACTGAGGATAAATTCGAGCTGTTCCT 142654
|| || ||| || | ||| || || ||| || ||||| ||| | || | |
Sbjct 695 ATGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTT 636
Query 142655 GAACGTTCAGTCATGAACAATTCGAAGAGGTCACGTGCTTTAATACGTTTCTTACGAATA 142714
| |||||| | |||| | ||| || ||| |||||||| ||||| ||||||||
Sbjct 635 GCACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACGAATT 576
Query 142715 CTAGGGTCTTTTTCAGCCGCTTCATACAATTCGCGG-AAACG-GTCTTGGTCTTCAAAAT 142772
||||| ||| | |||| | |||| |||| ||||||||||||||||
Sbjct 575 GATTCGTCTTGTTCGTATTTTACATAAAG--CGCGTCAAACTCGTCTTGGTCTTCAAAAA 518
Query 142773 AAGAATAATAAAGCTCACCGCTCATTTCATGAGGACTGAATAACGTGATGTAATCATTTT 142832
| | || ||||| | || ||| || || || || || || ||||| || | ||
Sbjct 517 ATGCATCGTAAAGGCCTG-GCACAT--CAGAGGGGCTAAACAAGGTAATGTAGTCGTCTT 461
Query 142833 TACCGAAACGTTCCATCATAAGGTCGTTCAACTGGATTCCGTAGTCCATATGACGAATAC 142892
|| ||||| ||| || | || ||||| | ||||| || | |||||| | |
Sbjct 460 TAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGC 401
Query 142893 GGTTCTCATCAACGCCTTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCC 142952
|||| |||||||| || ||| ||||| || || | ||| ||||| ||||| |||||||
Sbjct 400 GGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCC 341
Query 142953 AAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTT 143010
||| || || | ||| || || ||||||||||| | || ||||| ||||| |||
Sbjct 340 AAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTT 283
Query 143011 AACTGCAGTCTGGAAATGCTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCAT 143070
||| || || || || ||||| | || |||||| ||| ||||| | |||| || |
Sbjct 282 AACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTCGCCATT 223
Query 143071 ACCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTT 143130
| ||| | ||| |||||||| ||| |||| || ||||| || |||||||
Sbjct 222 GCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTG 163
Query 143131 AGAAATATACTCGATTATTGAGTTAGCAGTTTTATTAATTGATTTCAGCGAGTCACCTGC 143190
|| | || | | |||| | || |||||||| | || ||| ||
Sbjct 162 CGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACA 103
Query 143191 TTCAATAACAACGCAAGAACTAAACTGACGGGTCGGGGTACGAGCACCAGCCATAATAGG 143250
|| || | || || || |||||||| || || || |||||| |||| |||||||| ||
Sbjct 102 CTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGG 43
Query 143251 AGTAGGCAATGAAAT 143265
||||| | ||||||
Sbjct 42 CGTAGGTAGTGAAAT 28
>seq509673
Length=441
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 142859 TTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTTT 142918
|| ||||| | ||||| ||||||||||| | |||||| || || ||||| ||| |||
Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281
Query 142919 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 142978
||||| || | | |||||||| |||||||| | || ||| | || || ||
Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341
Query 142979 CCGCCACGGATTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAAT 143038
|||||||||| || |||||||| || ||||||| ||||| ||||| | || |||||
Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401
Query 143039 GGAATAACACCGGTATG 143055
|| ||| ||| |||||
Sbjct 402 GGGATACAACCCGTATG 418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541803084705360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |