Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028881.1 Length=170473 Score E Sequences producing significant alignments: (Bits) Value seq449735 190 2e-43 seq509673 116 4e-21 >seq449735 Length=3187 Score = 190 bits (210), Expect = 2e-43 Identities = 523/795 (66%), Gaps = 20/795 (3%) Strand=Plus/Minus Query 142484 AATGCAGACAGAGTACATAACCCGATTTCAGCTTCAGGGCTATTTACGTCAT-------- 142535 |||||||| || ||||||| | | ||||| |||| | ||||||| || Sbjct 815 AATGCAGAGAGTGTACATAGCGCAATTTCGCCTTCTTCGTCGTTTACGTTATCCAACGGC 756 Query 142536 -TAGTCGGGATTGCAATTTCACAACACAAGTTGCTCTGACGAATAGGAGCACGTTCACGA 142594 |||| || | ||||||||| |||| || || || |||||||| || || | | Sbjct 755 TTAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCA 696 Query 142595 ATAAATGGGGTGAAGTTGTTAGTGTTATCTACGAACTGAGGATAAATTCGAGCTGTTCCT 142654 || || ||| || | ||| || || ||| || ||||| ||| | || | | Sbjct 695 ATGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTT 636 Query 142655 GAACGTTCAGTCATGAACAATTCGAAGAGGTCACGTGCTTTAATACGTTTCTTACGAATA 142714 | |||||| | |||| | ||| || ||| |||||||| ||||| |||||||| Sbjct 635 GCACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACGAATT 576 Query 142715 CTAGGGTCTTTTTCAGCCGCTTCATACAATTCGCGG-AAACG-GTCTTGGTCTTCAAAAT 142772 ||||| ||| | |||| | |||| |||| |||||||||||||||| Sbjct 575 GATTCGTCTTGTTCGTATTTTACATAAAG--CGCGTCAAACTCGTCTTGGTCTTCAAAAA 518 Query 142773 AAGAATAATAAAGCTCACCGCTCATTTCATGAGGACTGAATAACGTGATGTAATCATTTT 142832 | | || ||||| | || ||| || || || || || || ||||| || | || Sbjct 517 ATGCATCGTAAAGGCCTG-GCACAT--CAGAGGGGCTAAACAAGGTAATGTAGTCGTCTT 461 Query 142833 TACCGAAACGTTCCATCATAAGGTCGTTCAACTGGATTCCGTAGTCCATATGACGAATAC 142892 || ||||| ||| || | || ||||| | ||||| || | |||||| | | Sbjct 460 TAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGC 401 Query 142893 GGTTCTCATCAACGCCTTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCC 142952 |||| |||||||| || ||| ||||| || || | ||| ||||| ||||| ||||||| Sbjct 400 GGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCC 341 Query 142953 AAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTT 143010 ||| || || | ||| || || ||||||||||| | || ||||| ||||| ||| Sbjct 340 AAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTT 283 Query 143011 AACTGCAGTCTGGAAATGCTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCAT 143070 ||| || || || || ||||| | || |||||| ||| ||||| | |||| || | Sbjct 282 AACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTCGCCATT 223 Query 143071 ACCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTT 143130 | ||| | ||| |||||||| ||| |||| || ||||| || ||||||| Sbjct 222 GCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTG 163 Query 143131 AGAAATATACTCGATTATTGAGTTAGCAGTTTTATTAATTGATTTCAGCGAGTCACCTGC 143190 || | || | | |||| | || |||||||| | || ||| || Sbjct 162 CGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACA 103 Query 143191 TTCAATAACAACGCAAGAACTAAACTGACGGGTCGGGGTACGAGCACCAGCCATAATAGG 143250 || || | || || || |||||||| || || || |||||| |||| |||||||| || Sbjct 102 CTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGG 43 Query 143251 AGTAGGCAATGAAAT 143265 ||||| | |||||| Sbjct 42 CGTAGGTAGTGAAAT 28 >seq509673 Length=441 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142859 TTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTTT 142918 || ||||| | ||||| ||||||||||| | |||||| || || ||||| ||| ||| Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281 Query 142919 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 142978 ||||| || | | |||||||| |||||||| | || ||| | || || || Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341 Query 142979 CCGCCACGGATTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAAT 143038 |||||||||| || |||||||| || ||||||| ||||| ||||| | || ||||| Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401 Query 143039 GGAATAACACCGGTATG 143055 || ||| ||| ||||| Sbjct 402 GGGATACAACCCGTATG 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541803084705360