Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028885.1
Length=72378
Score E
Sequences producing significant alignments: (Bits) Value
seq486019 327 5e-85
seq488807 210 1e-49
seq255804 176 2e-39
seq513438 113 2e-20
seq523594 96.9 2e-15
seq469180 82.4 4e-11
>seq486019
Length=823
Score = 327 bits (362), Expect = 5e-85
Identities = 571/824 (69%), Gaps = 5/824 (1%)
Strand=Plus/Minus
Query 1088 TGTACATTGCACTGTACGGTGAGCTTCCTGGTTTCGGTAAGGTAGACCTTGCTCTGTACG 1147
||||||| || |||||||| | || || || ||||| || | | |||||||| |
Sbjct 821 TGTACATAGCTTGTTACGGTGACATCCCCGGGTTTGGTAAAGTTCCCTTGGCTCTGTATG 762
Query 1148 TGTCGGACTCCATCGACAACGGTGTGAAGAACATGCGTAAGAACCTGGAGTTCCGCTGGG 1207
| || || || || |||||||| |||||||||||||||||| |||||||||| ||||
Sbjct 761 TTTCAGATAGTATAGAGAACGGTGTTAAGAACATGCGTAAGAACTTGGAGTTCCGTTGGG 702
Query 1208 AGAACTCCGAGTTCCTGAAGAAATACATCCCCCAAACCAACTTCACTGACATCCGCTGGA 1267
| ||||| || || | || || | || | || | |||||||| || ||||||
Sbjct 701 AAAACTCAGAATTTTTACTTAAGTATGTACCT-ACACTAGGTTCACTGATATACGCTGGG 643
Query 1268 AGTTCACGAACCTGGACGGGAAGGTCTTCATCGTCAAGGGCTACGGTGCCAAGACTGGTG 1327
| || | ||| | || || || || ||||| || || || || || ||||| ||||
Sbjct 642 AATTTAATAACATTGATGGTAACCGATTTATCGTAAAAGGTTATGGCGCAAAGACCGGTG 583
Query 1328 TCCGTGGTGCGAAGGAGATGGGTAAGCGACCGCAGCTTGCGGTACTGGATGACTTGGTTT 1387
| |||||||| || ||||||||| || || |||||| ||||| |||||||| | |
Sbjct 582 TACGTGGTGCTAAAGAGATGGGTGTTCGTCCAGTGCTTGCTGTACTAGATGACTTAATAT 523
Query 1388 CGGACGAAGATGCTCGCTCGCCAACCGTCATCGCAGCCATCGAAGACACGGTGTACAAGG 1447
|||| |||||||| | || | || || || | || | ||||| || ||||||||||
Sbjct 522 CGGATGAAGATGCGAGGTCAGCTACAGTTATTTCTGCTGTAGAAGATACAGTGTACAAGG 463
Query 1448 CAGTGGACTACGCACTGCACCCGAAGAAGAAC-ATGATCATCTGGTCGGGTACACCGTTC 1506
| | ||||||||| | |||| || | | | | | | |||||||| ||||| || ||
Sbjct 462 CTATTGACTACGCATTAGACCC-AATACGCTCTAAGGTAATCTGGTCAGGTACTCCCTTT 404
Query 1507 AACGCGAAGGATCCACTGTACAAAGCAGTGGAGTCTGGTGCCTGGAAGGTCAACGTCTAC 1566
||| || |||||| | ||||||||||| ||||||||||| ||| || ||||| |||
Sbjct 403 AACTCGCGTGATCCATTATACAAAGCAGTTGAGTCTGGTGCTTGGGCAGTTAACGTGTAC 344
Query 1567 CCTGTGTGCGAGAGATTCCCGTGCTCGCGGGAAGAGTTCAGGGGTGCATGGGCTGACCGA 1626
|||||||| | | || || || | |||| || || ||||| ||| |||| ||
Sbjct 343 CCTGTGTGTGCTAATTTTCCTTGTGAAGAGAAAGACTTTAGAGGTGCGTGGCCTGATCGT 284
Query 1627 TTCACCTACGACTTCGTGTTGCAGAAGTACACCCTGGCCAAGAAGGCAGGGAAGATCGAG 1686
||| | || | || || || | || ||||| || |||||||| ||| | ||
Sbjct 283 TTCTCATATCAATTTGTTTTAGACAAATACACTAAAGCTTTTAAGGCAGGTAAGGTGGAT 224
Query 1687 ACGTTCAACCAAGAGCTTATGCTCCAGATCATGTCCGACGAAGACCGACTCATCCAGGAT 1746
|| || ||||||||||||||| | | |||||||| ||||| || || || || || |||
Sbjct 223 ACATTTAACCAAGAGCTTATGTTACGAATCATGTCAGACGAGGATCGTCTAATTCAAGAT 164
Query 1747 GGTGAGGTGGCTTGGTACATGC-GGCGCAACGTACTGGACAATAAGAAGCGGTACAACTT 1805
|||| | ||||||| | | || ||| | | ||||| || ||||||
Sbjct 163 TGTGATATTAACTGGTACAGACATGAGC-TTGTATTAAAAAATAAAGGTAAGTTCAACTT 105
Query 1806 CTACATCACCACTGACTTCGCTACCTCTGCGAAGAAGGCGAGTGACTTCAGTGTGATCAG 1865
||| || || |||||||| || || || |||| | || |||||||| |
Sbjct 104 CTATATAACAACTGACTTTGCAACTAGTGAAAAGACCTCTGCGGATTTCAGTGTTTTATC 45
Query 1866 TGTCTGGGCTTACTCCCACAACGAAGACTGGCTGTGGGTGGATG 1909
||| ||||||||| |||| | || ||| | ||||| ||||
Sbjct 44 TGTGTGGGCTTACAATAACAATGGTGATTGGTTCTGGGTTGATG 1
>seq488807
Length=774
Score = 210 bits (232), Expect = 1e-49
Identities = 369/530 (70%), Gaps = 12/530 (2%)
Strand=Plus/Plus
Query 1435 ACGGTGTACAAGGCAGTGGACTACGCACTGCACCCGAAGAAGAACATGATCATCTGGTCG 1494
|| || || || |||||||| |||||| |||| || | ||| | || ||||||||
Sbjct 1 ACAGTTTATAAAGCAGTGGATTACGCATTGCATCCTACCAAGTCTAAAATAATCTGGTCA 60
Query 1495 GGTACACCGTTCAACGCGAAGGATCCACTGTACAAAGCAGTGGAGTCTGGTGCCTGGAAG 1554
||||| ||||| ||||| || ||| ||||||||||||| ||||| || || ||| |
Sbjct 61 GGTACTCCGTTTAACGCCCGTGACCCATTGTACAAAGCAGTTGAGTCAGGAGCTTGGTAC 120
Query 1555 GTCAACGTCTACCCTGTGTGCGAGAGATTCCCGTGCTCGCGGGAAGAGTTCAGGGGTGCA 1614
|| || || ||||||||||| |||| ||| || || || | |||||||||| || ||
Sbjct 121 GTAAATGTGTACCCTGTGTGTGAGAAATTTCCTTGTACGAGAGAAGAGTTCAAAGGCTCA 180
Query 1615 TGGGCTGACCGATTCACCTACGACTTCGTGTTGCAGAAGTACACCCTGGCCAAGAAGGCA 1674
||| |||| || ||||| || |||| || || || | |||||| || || |||
Sbjct 181 TGGCCTGATCGCTTCACGTATGACTATGTAATGAAGCAATACACCAAAGCTGTTAAAGCA 240
Query 1675 GGGAAGATCGAGACGTTCAACCAAGAGCTTATGCTCCAGATCATGTCCGACGAAGACCGA 1734
|| ||| | || | || ||||||||| | ||||| || ||||| || |||||| ||
Sbjct 241 GGTAAGGTGGATTCTTTTAACCAAGAGTTGATGCTAAGAATTATGTCAGAAGAAGACAGA 300
Query 1735 CTCATCCAGGATGGTGAGGTGGCTTGGTACATGCGGCGCAACGTACTGGACAA----TAA 1790
| || | ||| ||||| | ||||||| || || || | ||| || ||
Sbjct 301 TTAATTAAAGATAGTGAGATTAATTGGTAC--GC-ACGTAATGCACTTCTTAAGAGTAAA 357
Query 1791 GAAGCGGTACAACTTCTACATCACCACTGACTTCGCTACCTCTGCGAAGAAGGCGAGTGA 1850
|| || |||||||||||||||||| || || || || ||||||| || |||| || ||
Sbjct 358 GACGC-GTACAACTTCTACATCACTACGGATTTTGCAACCTCTGAAAAAGAGGCTAGCGA 416
Query 1851 CTTCAGTGTGATCAGTGTCTGG--GCTTACTCCCACAACGAAGACTGGCTGTGGGTGGAT 1908
||| || || || ||| ||| ||||| | || | | | ||| | ||||| ||
Sbjct 417 CTTTAGCGTAATATCTGTATGGGCGCTTA-GCTCAGATGGTA-CGTGGTTCTGGGTAGAC 474
Query 1909 GGTATCTGTGAACGCCAGGACATGGGGGCGAACCTGGATGATCTGTTCAG 1958
||||| || || | || |||||| | ||| | ||||| |||| ||
Sbjct 475 GGTATTTGCGAGCAACAAGACATGTCCGTAAACATTGATGACTTGTTTAG 524
>seq255804
Length=3791
Score = 176 bits (194), Expect = 2e-39
Identities = 685/1065 (64%), Gaps = 29/1065 (3%)
Strand=Plus/Minus
Query 910 TTTGCCTTGCAGTTCGTTGAC-TTCATCAAGATGGTCAACGGTAACGAAGGGGAAGAGAA 968
||||| ||| ||||| ||||| || || ||| | || || ||| || || || |||||
Sbjct 2983 TTTGCATTGGAGTTC-TTGACGTTTATTAAGCTAGTTAATGGTGGTGAGGGTGAGGAGAA 2925
Query 969 CAAGACACCAGTGCTTCACCTACGGATGCTTGACCAGATTGGCTCTGGCC--AGACACGG 1026
| |||| || ||||| || |||| | || || | | ||| ||| |||
Sbjct 2924 CGTATCACCTGTTATTCACTTAAAGATGTTAGATAAGTTAGATGGTGGATTAAGAAACGT 2865
Query 1027 ATCGCCAACATGGTCTTCCGTGGTGCAGCCAAGACTACCGTGATGGGTGAGTACCTGTTC 1086
| || |||||| |||| |||||||||| |||||||| | |||| ||||||||| ||
Sbjct 2864 A--GCTAACATGATCTTTCGTGGTGCAGGTAAGACTACACTAATGGCTGAGTACCTTATC 2807
Query 1087 CTGTACATT-GCACTGTACGGTGAGCTTCCTGGTTTCGGTAAGGTAGACCTTGCTCTGTA 1145
| || || || ||||||| | || || |||||||| | | | |||||
Sbjct 2806 TTATATCTTAGCGGTGTACGGCAGAATGCCGTCCTTTGGTAAGGTTAAATTAGTGCTGTA 2747
Query 1146 CGTGTCGGACTCCATCGACAACGGTGTGAAGAACATGCGTAAGAACCTGGAGTTCCGCTG 1205
|| || || || || |||||| | ||| ||| | |||||| | |||| || ||
Sbjct 2746 TGTATCAGATAGTATTGATAACGGTATTAAGTCAATGAGAAAGAACTTAGAGTCTCGTTG 2687
Query 1206 GGAGAACTCCGAGTTCCTGAAGAAATACATCCCCCAAACC------AACTTCACTGACAT 1259
||||| |||||| | |||| || | || || || |||| || ||
Sbjct 2686 GGAGAGTAGTGAGTTCTTACAGAAGTATCTACCTAAAGAAGGATTAAAGCTCACAGATAT 2627
Query 1260 CCGCTGGAAGTTCACGAACCTGGACGGGAAGGTCTTCATCGTCAAGGGCTACGGTGCCAA 1319
| ||| |||| | ||| | | || | ||| | || ||||| || ||||||||
Sbjct 2626 TAGGTGGGAGTTTAAGAATATTAATGGTACTAAATTCGTAGTAAAGGGGTATGGTGCCAA 2567
Query 1320 GACTGGTGTCCGTGGTGCGAAGGAGATGGGTAAGCGACCGCAGCTTGCGGTACTGGATGA 1379
||| ||| | ||||||| |||||||||||||| || || ||| | || | || |||||
Sbjct 2566 GACAGGTATTCGTGGTGTGAAGGAGATGGGTACACGCCCACAGATGGCTATCCTAGATGA 2507
Query 1380 CTTGGTTTCGGACGAAGATGCTCGCTCGCCAACCGTCATCGCAGCCATCGAAGACACGGT 1439
||| ||| | || || | || || || || || || ||| || ||||||| ||
Sbjct 2506 CTTAGTTAGTAATGATGACTCACGTTCACCTACAGTTATTCAAGCTATTAAAGACACAGT 2447
Query 1440 GTACAAGGCAGTGGACTACGCACTGCACCCGAAGAAGAACATGATCATCTGGTCGGGTAC 1499
|||| | | || ||||| ||||| |||||| | || || ||| |||||
Sbjct 2446 AGGTCAGGCTATTAAGTATGCACTTCACCCTAAGAAGTCTAAGACTATATGGCTTGGTAC 2387
Query 1500 ACCGTTCAACGCGAAGGATCCACTGTACAAAGCAGTGGAGTCTGGTGCCTGGAAGGTCAA 1559
|| || || || || ||||| |||| |||| |||| |||||||| ||| | || |
Sbjct 2386 TCCCTTTAATGCTAATGATCCTTTGTATGAAGCTATGGAATCTGGTGCATGGGATGTAAG 2327
Query 1560 CGTCTACCCTGTGTGCGAGAGATTCCCGTGCTCGCGGGAAGAGTTCAGGGGTGCATGGGC 1619
|| || ||| | || |||| || || || | | |||||||| | || |||||||
Sbjct 2326 TGTATATCCTATATGTGAGAAGTTTCCTTGTACTAGAGAAGAGTTTAAAGGAGCATGGGA 2267
Query 1620 TGACCGATTCACCTACGACTTCGTGTTGCAG--AAGTACACCCTGGC-CAAG---AAGGC 1673
|| || || || |||| ||| | || | |||| ||| | || ||||
Sbjct 2266 GGATCGCTTTGATTATGACT--ATGTAGAAGCTATGTACCAAGAGGCACTAGCTCAAGGT 2209
Query 1674 AGGGAAGATCGAGACGTTCAACCAAGAGCTTATGCTCCAGATCATGTCCGACGAAGACCG 1733
| || || | ||| | |||||||||||||| || || ||||| || || || |
Sbjct 2208 ATGGTGAATGG----TTTCTATCAAGAGCTTATGCTACAAATTATGTCTGATGAGGATAG 2153
Query 1734 ACTCATCCAGGATGGTGAGGTGGCTTGGTACATGCGGCGCAACGTACTGGACAATAAGAA 1793
| | | |||||||| | |||| | ||| | |||| ||||||||
Sbjct 2152 ATTAGTAGTTGATGGTGATTTAAGATGGTTTACTTTAAAGAACCTGATGGATAATAAGAA 2093
Query 1794 GCGGTACAACTTCTACATCACCACTGACTTCGCTACCTCTGCGAAGAAGGCGAGTGACTT 1853
| || ||||| || || |||||||| ||||| || ||| | | ||||||
Sbjct 2092 TAACTTTAATTTCTATATTACTACTGACTTTGCTACTAGTGAAAAGCAATCTGCTGACTT 2033
Query 1854 CAGTGTGATCAGTGTCTGGGC--TTACTCCCACAACGAAGACTGGCTGTGGGTGGATGGT 1911
|| | || ||||| ||||| ||| | | || | | | | ||||| |||||
Sbjct 2032 TAGCTTTATTAGTGTTTGGGCTGTTAAT--AATAAAGGTAATTACTTTTGGGTAGATGGA 1975
Query 1912 ATCTGTGAACGCCAGGACATGGGGGCGAACCTGGATGATCTGTTC 1956
|| ||| | | ||| ||||| |||| | ||||||||||||
Sbjct 1974 ATATGTAAGAGACAGACCATGGATAAGAACATTGATGATCTGTTC 1930
>seq513438
Length=501
Score = 113 bits (124), Expect = 2e-20
Identities = 242/356 (68%), Gaps = 8/356 (2%)
Strand=Plus/Plus
Query 844 AAGTCTGTAGAGCAATGGCTTCGTGAAGTAGTCTATGGGGATGACTCTTCGTACATCCCC 903
||| | |||||||||||| || || ||| |||| | | ||| || || || |||
Sbjct 150 AAGACGGTAGAGCAATGGATTAACGACGTAAACTATTCGTACGACGATTGCTATATACCC 209
Query 904 AGCATCTTTGCCTTGCAGTTCGTTGACTTCATCAAGATGGTCAACGGTAACGAAGGGGAA 963
|| ||||| | |||||||| |||||| || ||||| ||||| || || |||
Sbjct 210 AGTGAGTTTGCAGTAGAGTTCGTTACCTTCATTAAAATGGTAAACGGCTCAGACGGTGAA 269
Query 964 GAGAACAAGACACCAGTGCTTCACCTACGGATGCTTGACCAGATTGGCTCTGGCCAGACA 1023
|| ||||| || ||||| ||||||| | ||| | || ||| | | |||||||| |
Sbjct 270 GAAAACAAAACGCCAGTAGTTCACCTTAGAATGTTGGATCAGGTAAG---TGGCCAGAAA 326
Query 1024 -CGGAT--CGCCAACAT-GGTCTTCCGTGGTGCAGCCAAGACTACCGTGATGGGTGAGTA 1079
| || | ||| | ||| | |||||| | |||||| | || | ||||||||
Sbjct 327 GCCAATACCATAAACCTATGTCAT-CGTGGTTTGGGCAAGACAGCAGTATTTGGTGAGTA 385
Query 1080 CCTGTTCCTGTACATTGCACTGTACGGTGAGCTTCCTGGTTTCGGTAAGGTAGACCTTGC 1139
||| |||||||| | | ||||||| | | || || |||||||| || | | ||
Sbjct 386 CCTATTCCTGTATTTAGGCGTGTACGGAGCAATCCCGGGATTCGGTAAAGTTCCCTTGGC 445
Query 1140 TCTGTACGTGTCGGACTCCATCGACAACGGTGTGAAGAACATGCGTAAGAACCTGG 1195
|| ||||| || || ||| || || || || ||||| |||||||| ||| |||
Sbjct 446 GCTATACGTATCAGATAGCATTGAGAATGGCGTTAAGAATATGCGTAAAAACTTGG 501
>seq523594
Length=514
Score = 96.9 bits (106), Expect = 2e-15
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 35386 GTGAATGGTTTGGTCGGTGGCTTCGGTGTCTACAACGATGGCCGGACTGTCGAAGCTGGC 35445
|| ||||||||| | ||||| |||||||| ||||||||||| || ||||| ||||| ||
Sbjct 430 GTCAATGGTTTGATTGGTGGTTTCGGTGTGTACAACGATGGTCGCACTGTAGAAGCCGGT 489
Query 35446 TTCAACGTAGACCGCTTCTGGAT 35468
||| |||| ||||||||||||||
Sbjct 490 TTCGACGTGGACCGCTTCTGGAT 512
>seq469180
Length=838
Score = 82.4 bits (90), Expect = 4e-11
Identities = 255/391 (65%), Gaps = 3/391 (1%)
Strand=Plus/Plus
Query 5230 GGGTGAGAACTATGAGTTCAACCCAGGTGCAGACCCACGGGCTGCTGTGCACATGCACAC 5289
|||||| |||| |||| |||| |||| || ||| | || | ||||||| |
Sbjct 16 GGGTGATGACTACGAGTACAACGGTGGTGTTGATCCAAGTAAAGCATTTTACATGCATAA 75
Query 5290 CTTCCCAGAGATCCCGCAGTCCGCTCA-GTACATGATCAACCTGCAACAAGCAGAAGCTG 5348
| || ||| | | ||||| |||| ||| ||| | | ||||||| |||||||
Sbjct 76 GTATCCTGAGCTTTCACAGTCAGCTCCTGTA-ATGCTTAGTATGCAACACAATGAAGCTG 134
Query 5349 AATCCATGACTGGCGTGAAGGCTTTCAACGCTGGCATCTCTGGTGCTGCACTCGGTGACA 5408
|||| | || || | || || || | |||| | ||||| |||| | ||||| |
Sbjct 135 AATCATTAACAGGTATCAAAGCATTTAGTACTGGTGTAAGTGGTGATGCATTTGGTGATA 194
Query 5409 CCGCTACTGCTGTACGTGGTGCATTGGATGCTGCATCGAAGCGTGAGCTTGGAATCCTTC 5468
| | | | || ||||||||| |||| |||| || || |||||| | || ||| | |
Sbjct 195 CTGTTGGTAATGCTCGTGGTGCAATGGACTCTGCTTCTAAACGTGAGATAGGTATCTTAC 254
Query 5469 GCCGTCTCTCGGCTGGCATCATCGAGATCGGGCGGAAGATCATAGCCATGAACGCTGAGT 5528
| | | || ||||| ||||| || || ||||| ||| |||||||| ||
Sbjct 255 GTAG-ATAGGTGCAGGCATTGAAGAGATTGGCCGTAAGATTATAAGTATGAACGCCTTGT 313
Query 5529 TCCTGGACGATGTGGAAGTGGTACGGATCACGAATGAGCACTTCGTGGACATCCGCAGGG 5588
|| | || || | ||||| |||| || || | || | ||||| || | |
Sbjct 314 TCTTAGAAGAAGAAGAAGTTATACGAATTACTGACGAAGAGTTCGTTACTATTAAACGTG 373
Query 5589 ATGACCTTGCTGGCAACTTCGATTTGAAGCT 5619
||||||||||||| ||||| ||| | |||||
Sbjct 374 ATGACCTTGCTGGTAACTTTGATGTTAAGCT 404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230002242722058
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