Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028895.1
Length=116138
Score E
Sequences producing significant alignments: (Bits) Value
seq426744 201 8e-47
seq417094 176 3e-39
seq427934 129 4e-25
seq399133 116 3e-21
seq517141 113 3e-20
seq435060 113 3e-20
seq519962 107 1e-18
seq484804 102 6e-17
seq75992 91.5 1e-13
seq521152 87.8 1e-12
seq466100 86.0 5e-12
seq516866 84.2 2e-11
seq520451 82.4 6e-11
>seq426744
Length=341
Score = 201 bits (222), Expect = 8e-47
Identities = 206/266 (77%), Gaps = 6/266 (2%)
Strand=Plus/Plus
Query 100086 CGTTGTAGGTTAACACGTTGAGTAACGTAGTACGCATCACGTTGCTCGGAAGCACGGCGC 100145
||||||||||||| ||||||||| |||||||| ||||||||||||| ||| | |||
Sbjct 79 CGTTGTAGGTTAAGACGTTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGC 138
Query 100146 TCATACTCAACTGTTACTGTACGTTGACGCGGTACAACGAACTCATTGCGGTACACAATA 100205
||| || ||||| | ||||||||||| || |||||||| | | ||||| || |||
Sbjct 139 TCACGTTCTACTGTAATAGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATA 198
Query 100206 GCACAGAATGGTACGTTAACTGCTTTAGCTGGGAAGTAGCTAGAAACTACTACAGGCAGA 100265
| ||||||| | | || |||||||||||||||||| ||||||||| || | |||
Sbjct 199 GTACAGAATTCTGAACTGACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGA 258
Query 100266 CCGTAGATACGACCAACTTGTCCTTGTAGTTTGA--TAGCT-GCTGCAGCAGTTACTTGA 100322
|||||||||||||||||||||||||| ||||| | || | | ||| || |||||
Sbjct 259 CCGTAGATACGACCAACTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCA---ACTTGG 315
Query 100323 GTAACGTCTTGCCACTCATCATCTTC 100348
|||| || ||||| || ||||||||
Sbjct 316 TTAACATCCTGCCATTCTTCATCTTC 341
>seq417094
Length=394
Score = 176 bits (194), Expect = 3e-39
Identities = 217/295 (74%), Gaps = 4/295 (1%)
Strand=Plus/Plus
Query 48186 GGTTGAATGTAACAGTTGCCTGGCAGTGGCTCAATACCTTGAGATACTCCGCCACATAGC 48245
|||||| | |||| ||| || | || ||||| |||||| ||| | ||| | |
Sbjct 14 GGTTGATTATAACTGTTAGCTACAATAGGTTCAATGCCTTGACTAACTGCTTGACAAATC 73
Query 48246 AAGGAACTG--CTAGTATTAGGTGCTATAGCTAGTCTATGGGTGTTCCTTACGCCATAAC 48303
|| | ||| ||||||||||| || | |||||| ||| || || | ||||||||||
Sbjct 74 AATG--CTGAACTAGTATTAGGAGCAAGTGCTAGTAAATGTGTATTACGAACGCCATAAC 131
Query 48304 CCTTACACCACTCAGGCTCACCTAGCTCCTTGGCCATCCACTCTGACGCCCTCAAAGACT 48363
|||||||||| || ||||| || ||| || |||||||||| |||||| | || | ||
Sbjct 132 CCTTACACCATTCTGGCTCGCCCCACTCTTTAGCCATCCACTGTGACGCACGTAATGCCT 191
Query 48364 CCTTATTCAGGTGCTCGAAGATTTCTAGGTTCTTCATATGTGCTTCGAAAGACTCGAAAG 48423
| | || | || || ||||||||||| |||||||||||| |||||||| || || || |
Sbjct 192 CACTTTTGATGTTCTTGAAGATTTCTAAGTTCTTCATATGAGCTTCGAATGATTCAAACG 251
Query 48424 CAATCATATTATCTTGTAGATAAGTATGGTATCCTAGAAGCCCTAGACCCAGTGC 48478
|||||||||| | |||| || |||||| |||| ||| || ||||| | |||
Sbjct 252 CAATCATATTTTGCTGTAAGTATGTATGGAATCCAAGAGCACCAAGACCTAATGC 306
>seq427934
Length=2050
Score = 129 bits (142), Expect = 4e-25
Identities = 194/276 (70%), Gaps = 0/276 (0%)
Strand=Plus/Minus
Query 36826 TTGGTCTTCATAAATGTGCGCATTTACTATCTTATGAAACGCTCTGCCAGGTTCTAGTCC 36885
||||||||| ||||| || ||||| ||||||||||| | || | ||||||| | ||
Sbjct 1365 TTGGTCTTCGTAAATATGAGCATTGACTATCTTATGGTATGCCTTACCAGGTTTATGGCC 1306
Query 36886 AGTTATTTGAGCAACTATAGCTAGGAATGCGTACACTTGTACCATGTTGAAGTTAAGTCC 36945
||| || || || | || || || ||| | || |||||||||||||||||||| | ||
Sbjct 1305 AGTAATCTGGGCCATTAACGCAAGTAATACATATACTTGTACCATGTTGAAGTTTAACCC 1246
Query 36946 TAACGGTACGTCACAAGAGCGCTGAGTAGCGTTAAGGTACAGTTTACTATTTAGTATAGA 37005
|| ||| || |||||| |||||| || ||| ||||||| || | |||| ||
Sbjct 1245 TAGCGGAACATCACAACTGCGCTGTGTGCTGTTGAGGTACAAAGTATCACCGAGTAATGA 1186
Query 37006 GAACTGGAAGTTGTACATACAAGGGCGTAGGCAGCCCTGGTCGAACTCGCCTGGATTCCA 37065
|| ||| | ||||||||| || || | ||| || ||| || | || |||| |
Sbjct 1185 AAAATGGTGTTCGTACATACATGGTCGCAAGCAACCTAAGTCAAATGCTCCAGGATGAAA 1126
Query 37066 GTAGCTTAGAATTTCGCCACGGTCGTCAATCCCCTT 37101
| || ||| ||| || || |||| || || || ||
Sbjct 1125 GAAGGTTAAAATCTCACCGCGGTTATCTATACCATT 1090
>seq399133
Length=2727
Score = 116 bits (128), Expect = 3e-21
Identities = 247/364 (68%), Gaps = 16/364 (4%)
Strand=Plus/Minus
Query 102324 CCTCCCTCTTGACCTGATACACCCGTATTAGAACCCGCAATATTTTGAGGTATCCTAATT 102383
||||||||||| || | ||| || ||| ||||| ||||||||| || || | |||
Sbjct 2710 CCTCCCTCTTGTCCGGTTACTCCAGTAGCTGAACCTGCAATATTTGCTGGGATACGAATC 2651
Query 102384 TTATCCATTTCAGGGTCGTTAAGTGGCTCATACCTAAGCTCAATCCTACCCTCGTTACCG 102443
|||||||| || ||||| | | | || |||| || || || || |||
Sbjct 2650 TTATCCATATCGGGGTCTTGCATTTTATCTAGTCTAATAGCAGCTCTTCCTTCATTAGGA 2591
Query 102444 GTGATTATTCCATTATTTACTTTGGAACTAA------CGGCTTTAGCTTTCGCCTCTTCA 102497
|||||||| |||||||| ||| | ||| | |||||| |||||| |
Sbjct 2590 GTGATTATACCATTATTAACTAGTGCACTGATTCTATCGGCTTCTGCTTTC------TGG 2537
Query 102498 TCTGGGGCTAGGGCTGCTATATCATCAGTCATTAACTTTA-TATCGTAAGCGAAGAACAA 102556
||||| || ||| | | | || |||| |||| || | ||||| | ||||| || |
Sbjct 2536 TCTGGTTTTAAGGCAGGGACTTTATGAGTC-TTAAGTTCAATATCGAATGCGAAAAATAC 2478
Query 102557 CTCAAACACAGACTCGAA-TTTCTTCATCATTGGAAGTATAGTCATGTAGAAGAGCAGGT 102615
| || ||| |||||| |||||| | |||||||| ||| | |||||| | | |
Sbjct 2477 TACGAAAACACTCTCGAACTTTCTT-AGCATTGGAATTATTTGTAAGTAGAATAATAACT 2419
Query 102616 CAATGTTAGGCCTAATGTTAGCGTTATTACCAGAGTCTAGTAGTAGGGGAGGAACTCCCA 102675
| | ||| ||| ||||||| |||||||||||||| | ||||| || ||||| ||||| |
Sbjct 2418 CTAAGTTTGGCTTAATGTTGGCGTTATTACCAGAATTTAGTAATATAGGAGGGACTCCTA 2359
Query 102676 GAGC 102679
|||
Sbjct 2358 TAGC 2355
>seq517141
Length=371
Score = 113 bits (124), Expect = 3e-20
Identities = 125/164 (76%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 50154 GTAGAATGGTGCGTGGATGTTTATTTCAGCAAACGAAAATGA-GTTGCCCATCTGACGGA 50212
||||||||||| ||| ||||| || |||| | | ||| | | |||| || | |
Sbjct 337 GTAGAATGGTGAGTGTATGTTAATCTCAGTATTTGCAAAGGCTGCTGCC-ATACGTGCAA 279
Query 50213 AGTCATGCCTAGGGAACATTCTCTTGAAACGACCGCCCCAATACTCGTTACCTGCAACTA 50272
|||| | ||||||||||| | ||| || ||||| ||||||||||| ||||| || |||
Sbjct 278 AGTCTGGTCTAGGGAACATACGCTTAAATCGACCACCCCAATACTCATTACCAGCTACTT 219
Query 50273 GCTCATATAATGTGAATAGTTTTAAGGTTGTGATTACCCCATGA 50316
||||||||| |||||||| |||||| | || ||||| ||||||
Sbjct 218 GCTCATATAGTGTGAATAACTTTAAGTTAGTTATTACACCATGA 175
>seq435060
Length=507
Score = 113 bits (124), Expect = 3e-20
Identities = 286/434 (66%), Gaps = 21/434 (5%)
Strand=Plus/Plus
Query 69688 GACTTCCACTCAACTATCGCACACATGGTATTTAACCTGCCATGTACACCTAACGAGGTT 69747
||||||||| | || || |||||||| |||||||| || |||| ||| | || |||
Sbjct 53 GACTTCCACAGTAACATAGCTCACATGGTGTTTAACCTACCTTGTAAGCCTGAGGAAGTT 112
Query 69748 AAAAAGAAGTTCCCGGCTATGCGTCAGGCTGCAAAGGCGATTACGTTCGGAATCCTGTAC 69807
|| || ||||| || | | |||||||| |||||||| || || || || || | |
Sbjct 113 AAGAAACTATTCCCAGCCCTAAGGCAGGCTGCGAAGGCGATAACATTTGGTATTCTATTC 172
Query 69808 GGGTCAGGGCCAGCTAAGGTTGCTGAGTCTGTTAACATCGCGCTACTAGAACAAAGTATC 69867
|| ||||| |||| || || ||| |||||| | || |||||| |
Sbjct 173 GGTTCAGGAGCAGCATCTGTAGCAGAGCAAGTTAACTTAGCTAAGCTAGAATTA------ 226
Query 69868 GCGACTGGTCAACCCTTTGAACCTTGTTCAATCGAAGATGCAAAAGACCACATCAACACA 69927
||| || | ||| |||| | | ||| || || ||||| |
Sbjct 227 ------GGTGAAGCAGCTGA---TTGTACTAAAGAAATCGCCGCAGGTTACATCGAAGTG 277
Query 69928 TACTTCCGTAAGTTCCC-ACAATTACGTAAG--TGGATTGATGCTTCGCATGACCAGATT 69984
|||||| |||||| | | ||| ||| ||||||||| ||| ||||| | ||
Sbjct 278 TACTTCAAGCGGTTCCCTAGACTTA---AAGCGTGGATTGATTCTTGTCATGATGAAATC 334
Query 69985 CGTCAGTACGGATTCATCTATAGCTTCTATGGTCGTAAACGTAGACTGCGTAACTACAAG 70044
|||||| | ||||| || || | | || || ||||| |||||| | | ||| |
Sbjct 335 CGTCAGAAAGGATTTATATACAACCACTTCGGCCGTAAGCGTAGATTACACAACATCTCT 394
Query 70045 TCTACTGATAGGGCAGTCGTAGGTGCAGAGATTCGCTCAGGATTTAACGCTATAATCCAA 70104
|||| ||||| | || ||||||| ||| || || ||||||||||| ||||| || ||
Sbjct 395 TCTAGCGATAGAGGCGTTGTAGGTGGAGAAATCCGTTCAGGATTTAATGCTATCATACAG 454
Query 70105 TCTGCGTCTTCTGA 70118
|||||||| |||||
Sbjct 455 TCTGCGTCATCTGA 468
>seq519962
Length=460
Score = 107 bits (118), Expect = 1e-18
Identities = 121/161 (75%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 69469 ACTACTTCTGGACGACTAAGCTCTTCCGGTACATTTAACGCGCAACAATTACCTCGTGAT 69528
|||||||| || ||| | || ||||||||| || ||| ||| || | || ||||||
Sbjct 161 ACTACTTCAGGTCGATTGAGTAGTTCCGGTACGTTCAACATGCAGCAGCTGCCACGTGAT 102
Query 69529 AA-CCCAATTATCAAGGGATGTATTGTGGCTCCACCAGGCTACAAAGTAGTGGCAAAAGA 69587
|| |||||| ||||| || ||| || ||||||| |||||||| || |||| || ||
Sbjct 101 AACCCCAATCATCAAAGGTTGTGTTATGGCTCCTCCAGGCTATAAGATAGTAGCTGCCGA 42
Query 69588 CTTAACAACAGCTGAGGTATACTACGCAGCGGCACTGTCAG 69628
|||||||| ||||| || |||| ||| |||| | | ||||
Sbjct 41 TTTAACAACCGCTGAAGTTTACTTCGCTGCGGTATTATCAG 1
>seq484804
Length=980
Score = 102 bits (112), Expect = 6e-17
Identities = 193/281 (69%), Gaps = 6/281 (2%)
Strand=Plus/Plus
Query 37181 CCCTGTACCCCGTAAACACGCCCCATGTCGTCTTCACCGCGCCTGTGAGGGTTTTTCAAC 37240
|| || | ||||||||| |||||||| || |||||||| | |||| ||| || | |
Sbjct 103 CCTTGAATCCCGTAAACGCGCCCCATATCATCTTCACCTTTGCGGTGAATGTTATTAAGC 162
Query 37241 CAAGCCTCATTGATGTTCGCGTTAGCATCCCAGGTCTTCGTACCTAGGTTTCTGAAGTCT 37300
||||| ||||| | || || |||||||||||||| || |||||||| || | || ||
Sbjct 163 CAAGCATCATTTAAATTGGCATTAGCATCCCAGGTTTTAGTACCTAGTTTACGAAAATCA 222
Query 37301 TCTGCGTTAGAATAGCCTCTAATGTACCCTAGCAGCTCTGCTACTGCGGACTTCCAGAAA 37360
| || || ||| || | || || || | | ||| || | || ||||| | |||
Sbjct 223 GCGGCATTGTCATAACCACGGATATAACCAATAAACTCAGCAATCGCTGACTT-GAAAAA 281
Query 37361 GATTTT---CTAAGGCTAAGCAAGGGGAACTCGCCCGCCCCTACATTATACTCTAGGTCA 37417
| | || | || | | || || |||||| || || ||||| || | || |||
Sbjct 282 GCTCTTACGCGTAG--TTATTAATGGAAACTCGTTAGCACCAACATTGTATTGTAAATCA 339
Query 37418 TAGTTAATTACTGTTAGACAGCGCTTACCTGTGCGTTCGTT 37458
||||| || |||| ||| || ||||| || ||||||||
Sbjct 340 GCATTAATGACGGTTAAACAACGTTTACCGGTACGTTCGTT 380
>seq75992
Length=1236
Score = 91.5 bits (100), Expect = 1e-13
Identities = 99/130 (76%), Gaps = 1/130 (1%)
Strand=Plus/Minus
Query 68723 AAGAAAATAGAT-TGCACGACACGATGGTAATGCACTACGTTCTTGATGAAAGACAAGGT 68781
|| ||| |||| | |||||||| | || ||||| ||| |||| || ||||||||||||
Sbjct 134 AATAAAGTAGAAGTACACGACACTTTAGTTATGCATTACATTCTAGACGAAAGACAAGGT 75
Query 68782 ACACACGGTCTGAAGTCCCTAGCCATGAAACACACCGACATGGGCGACTATGACTTCGAG 68841
|| |||||||| ||||| ||||| || || | || ||| | || || || ||| |||
Sbjct 74 ACGCACGGTCTTAAGTCTCTAGCAATTAAGTATACAGACCTAGGGGATTACGACCGAGAG 15
Query 68842 CTAGACGAGT 68851
|||||||||
Sbjct 14 TTAGACGAGT 5
>seq521152
Length=754
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 49077 GGGCGAATATCTCCTAGGTACGCGGAAGTACCAAACCCATTCTTAGTCAGCATAGCTGTC 49136
|| ||||| || |||| ||| | |||||||| |||||||| || |||||||| ||
Sbjct 736 GGACGAATGTCACCTAAGTAACCACTTGTACCAAAGCCATTCTTTGTAAGCATAGCAGTA 677
Query 49137 TCGTGCAGGGTAGAATAGAATCCGTCAATGGAGTCGTCAATGTACCCACCTGAGCAACTT 49196
|| || | || |||||| || | || || ||||||||| | || || |||||
Sbjct 676 TCATGTCTAGCAGTATAGAAACCATGGATACTATCATCAATGTACGCGCCAGAACAACTA 617
Query 49197 ACAGGGAGTCCTTTATCTGTCCCCATATTTGCCATTACGGGTGTAGATGCCGCTAACCAA 49256
|| || | ||||| | ||| ||||| |||| | || || ||| |||||||||
Sbjct 616 ACTGGCATACCTTTGTTTGTACCCATGTTTGATAACACTGGAGTACTACAAGCTAACCAA 557
Query 49257 CCTTTCCAGAAAAGTTCAAAGAA 49279
|| ||||| | | ||||||||
Sbjct 556 CCATTCCACATTACATCAAAGAA 534
>seq466100
Length=556
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 100797 TCTGGCTCGATTTGCATTGTGATTTTCTTGCTAGTCATTGGCAGTTCTTGGAACATTGAA 100856
|||||||| || ||| || | |||| ||||||||||| || |||| ||| | |
Sbjct 6 TCTGGCTCAATCATCATAGTAAGAATCTTACTAGTCATTGGAAGCTCTTCGAATAAGTTA 65
Query 100857 CCAACTACTAGAAGCTTTTGAATATCCCGTAGAATGCGGTTAGAGAACACAGTCTCGTAC 100916
|| || || | | ||| || ||||| ||||| || || | |||||| | |||||||||
Sbjct 66 CCTACAACCATTAACTTCTGCATATCACGTAGGATACGTTGAGAGAAAATAGTCTCGTAG 125
Query 100917 TCTTCACTAGAAACAGTGATTGAAGAGCTAGAGTTAACTGCTTTTTGTAGGTTTTCACCG 100976
| ||||||||||| ||| || || | ||| || ||||| | | ||||||
Sbjct 126 TTCTCACTAGAAACTTCGATACTTGAACTTGCGTTCACAGCTTTAAGGTGAGCTTCACCA 185
Query 100977 AAAGTGGTTTCGAAAACGCCTTTCTTAGTGATAAA 101011
| ||||||| || | ||||| | ||| || ||
Sbjct 186 TATTTGGTTTCAAACATTCCTTTTTCAGTAATGAA 220
>seq516866
Length=361
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/216 (69%), Gaps = 5/216 (2%)
Strand=Plus/Plus
Query 16373 AGTAGCTTTGACAGCAGTACCGTGAGTATCACGAGTGACATACTGGTAAGTAAAGCTACC 16432
||||||||| || || | ||| || |||||||| |||||||||||||| || | |||
Sbjct 147 AGTAGCTTTAACTGCTGAACCATGGGTATCACGGGTGACATACTGGTAGCTATAAGAACC 206
Query 16433 AATACCCAATACTACAGCAGGTACAAAGCGTTTCGCTAACAAGCGGCTG-ATGATCTTGT 16491
||| || || || || || |||||| ||| | | || | |||| | ||||
Sbjct 207 AATTCCTAAAACCACTTTAGACGCAAAGCCTTTATCCATTAAAC-GCTGTAATATCTGAC 265
Query 16492 CTTGGCGCTCTAGAGTAATAGAGTCGCCATAGATTGCCCCAACGTGAGAATCTAGACGTT 16551
||||||| ||||||||| | |||||||| || || ||||| || ||| || |
Sbjct 266 GTTGGCGCGGTAGAGTAATTGCATCGCCATAAATGGCACCAACATGCTCATCAAGTAACT 325
Query 16552 TCAATCCGTTCTCGATTGTA---CCACCAAAAGTAT 16584
| || || || || | ||| ||||||||| |||
Sbjct 326 TAAAACCTTTGTCTGTAGTAGTGCCACCAAAAATAT 361
>seq520451
Length=342
Score = 82.4 bits (90), Expect = 6e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 48599 TTTCCACTCGTCGTACTTAGCCCCATTCATAGAGCTTAGTACACAGGTAAATGTGTGCAT 48658
|||||| || ||||||||||| |||||||| || | |||||| ||||| || ||
Sbjct 342 TTTCCATTCATCGTACTTAGCTAAGTTCATAGAACTCAATACACATGTAAACGTATGGTC 283
Query 48659 GTGATCGGAGAATAGGTTAATTTCAGTACATAGGTTAGAGCCTTTTACAGTAAGACCCCT 48718
| ||| || | ||| ||||| |||||| |||||| ||||||| | | ||| |
Sbjct 282 GATATCACTAAACAAGTTGATTTCGATACATAAGTTAGACGCTTTTACTTTCAAGCCCAT 223
Query 48719 GTCTTTGTACATT 48731
|||||||||||||
Sbjct 222 GTCTTTGTACATT 210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369137399988778
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