Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028916.1 Length=44573 Score E Sequences producing significant alignments: (Bits) Value seq494738 161 3e-35 seq441498 105 2e-18 >seq494738 Length=508 Score = 161 bits (178), Expect = 3e-35 Identities = 316/467 (68%), Gaps = 0/467 (0%) Strand=Plus/Plus Query 37280 TATGCAGGTGATAAAGCTTCTATAAAAGGCTTTGAGATTCACTATACTTTACGTGGTAGT 37339 |||||||| |||| ||| || ||| || ||||| |||| | || ||||| | Sbjct 34 TATGCAGGAGATAGAGCCTCAATAGAATCTTTTGATGTTCATTGGGTGTTCCGTGGAGCT 93 Query 37340 GATAAATCACCATCAGTTGCATGTTACTCAATTGAAGCTGGTATGCAAGGTGCTCGTGCA 37399 || || || ||||| ||| | |||||||| || || | || || || |||||||| Sbjct 94 GACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACAGGGCGCTCGTGCT 153 Query 37400 GATATTATCTTAGCAGATGACGTAGAGTCATTACAAAACTCAAGGACGGCAGCAGGTCGT 37459 ||||| || | |||||||| | ||||| ||||| ||||| | | | || || ||| Sbjct 154 GATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTTGCTGGCCGT 213 Query 37460 GCTTTGTTAGAGGATTTAACTAAAGAGTTTGAATCTATCAACCAATTTGGTGATATTATC 37519 | | ||| ||| || |||||| || |||||||||||||||||| ||||||| Sbjct 214 GAATGGTTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGGTCATATTATA 273 Query 37520 TACCTAGGTACACCTCAAAGTGTTAACTCTATCTACAACAATTTGCCTGCTCGTGGTTAT 37579 ||| |||| ||||| || || || | |||||||||||| ||||| |||||| || Sbjct 274 TACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAGTCGTGGCTAC 333 Query 37580 CAAATCCGTATATGGCCTGGTCGTTATCCTACTTTAGAGCAAGAAGCATGTTATGGTGAC 37639 | | ||||| ||| | ||| | || |||||| ||| | | ||| ||| Sbjct 334 AAGGTTCGTATCTGGACAGGTAGATACCCTACTGCTTCTCAAATGGAGTATTACAAGGAC 393 Query 37640 TTCCTAGCTCCTATGATTAAGCAGGATATGACAGAAGACCCTAGCTTACGTCATGGTTAT 37699 |||| ||| | || | || || | | | |||||||| ||||| ||| | Sbjct 394 AAAATAGCACCTCTTATATACCATGACTTAATACAAGACCCTTCCTTACAGGTTGGCGGT 453 Query 37700 GGTATTGATGGTACACAAGGTGCTCCTACTTGTCCTGAGATGTATGA 37746 ||||||||||| || || ||||||||||| |||||||| || Sbjct 454 GGTATTGATGGCACTATGGGACAGCCTACTTGTCCAGAGATGTACGA 500 >seq441498 Length=539 Score = 105 bits (116), Expect = 2e-18 Identities = 203/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 37574 GGTTATCAAATCCGTATATGGCCTGGTCGTTATCCTACTTTAGAGCAAGAAGCATGTTAT 37633 |||||| || | ||||| ||| | || ||||| ||||| || || || || || Sbjct 24 GGTTATAAAGTTCGTATCTGGACAGGGCGTTACCCTACAAATGAACAGCTAGAATACTAC 83 Query 37634 GGTGACTTCCTAGCTCCTATGATTAAGCAGGATATGACAGAAGA-CCCTAGCTTACGTCA 37692 ||||| ||||||||||| ||| || ||| | | | || | ||| | |||| Sbjct 84 GGTGATAAACTAGCTCCTATTATTCGTCATGATTT-AGATAACAACCCAATGTTACAGAT 142 Query 37693 TGGTTATGGTATTGATGGTACACAAGGTGCTCCTACTTGTCCTGAGATGTATGACGATGA 37752 ||| |||| ||||||| | || ||||| || ||||| |||||| | |||| Sbjct 143 AGGTGGTGGTCTTGATGGCTCTATGGGACAGCCTACCTGCCCTGAAATGTATACCAATGA 202 Query 37753 GAAGCTTATTGAGAAGGAAGTATCACAAGGTACAGCTAAATTCCAGTTACAGTTTATGCT 37812 | | | |||||||||| | |||| |||| |||||| ||| | ||||||||||||| Sbjct 203 TATCTTGAATGAGAAGGAATTGGCACAGGGTAAAGCTAAGTTCATGCTACAGTTTATGCT 262 Query 37813 CAATACAAGACTGCTGGACGCTGACAGATATCCTTTAAAACTAAATCAGTTAATCAT 37869 ||||| |||| || || ||||||| || | ||||||| | | |||||||| Sbjct 263 TAATACTGGACTTGCAGATGCAGACAGATTCCCACTCAAACTAAGTGACTTAATCAT 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141622677200340