Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028916.1
Length=44573
Score E
Sequences producing significant alignments: (Bits) Value
seq494738 161 3e-35
seq441498 105 2e-18
>seq494738
Length=508
Score = 161 bits (178), Expect = 3e-35
Identities = 316/467 (68%), Gaps = 0/467 (0%)
Strand=Plus/Plus
Query 37280 TATGCAGGTGATAAAGCTTCTATAAAAGGCTTTGAGATTCACTATACTTTACGTGGTAGT 37339
|||||||| |||| ||| || ||| || ||||| |||| | || ||||| |
Sbjct 34 TATGCAGGAGATAGAGCCTCAATAGAATCTTTTGATGTTCATTGGGTGTTCCGTGGAGCT 93
Query 37340 GATAAATCACCATCAGTTGCATGTTACTCAATTGAAGCTGGTATGCAAGGTGCTCGTGCA 37399
|| || || ||||| ||| | |||||||| || || | || || || ||||||||
Sbjct 94 GACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACAGGGCGCTCGTGCT 153
Query 37400 GATATTATCTTAGCAGATGACGTAGAGTCATTACAAAACTCAAGGACGGCAGCAGGTCGT 37459
||||| || | |||||||| | ||||| ||||| ||||| | | | || || |||
Sbjct 154 GATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTTGCTGGCCGT 213
Query 37460 GCTTTGTTAGAGGATTTAACTAAAGAGTTTGAATCTATCAACCAATTTGGTGATATTATC 37519
| | ||| ||| || |||||| || |||||||||||||||||| |||||||
Sbjct 214 GAATGGTTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGGTCATATTATA 273
Query 37520 TACCTAGGTACACCTCAAAGTGTTAACTCTATCTACAACAATTTGCCTGCTCGTGGTTAT 37579
||| |||| ||||| || || || | |||||||||||| ||||| |||||| ||
Sbjct 274 TACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAGTCGTGGCTAC 333
Query 37580 CAAATCCGTATATGGCCTGGTCGTTATCCTACTTTAGAGCAAGAAGCATGTTATGGTGAC 37639
| | ||||| ||| | ||| | || |||||| ||| | | ||| |||
Sbjct 334 AAGGTTCGTATCTGGACAGGTAGATACCCTACTGCTTCTCAAATGGAGTATTACAAGGAC 393
Query 37640 TTCCTAGCTCCTATGATTAAGCAGGATATGACAGAAGACCCTAGCTTACGTCATGGTTAT 37699
|||| ||| | || | || || | | | |||||||| ||||| ||| |
Sbjct 394 AAAATAGCACCTCTTATATACCATGACTTAATACAAGACCCTTCCTTACAGGTTGGCGGT 453
Query 37700 GGTATTGATGGTACACAAGGTGCTCCTACTTGTCCTGAGATGTATGA 37746
||||||||||| || || ||||||||||| |||||||| ||
Sbjct 454 GGTATTGATGGCACTATGGGACAGCCTACTTGTCCAGAGATGTACGA 500
>seq441498
Length=539
Score = 105 bits (116), Expect = 2e-18
Identities = 203/297 (68%), Gaps = 2/297 (1%)
Strand=Plus/Plus
Query 37574 GGTTATCAAATCCGTATATGGCCTGGTCGTTATCCTACTTTAGAGCAAGAAGCATGTTAT 37633
|||||| || | ||||| ||| | || ||||| ||||| || || || || ||
Sbjct 24 GGTTATAAAGTTCGTATCTGGACAGGGCGTTACCCTACAAATGAACAGCTAGAATACTAC 83
Query 37634 GGTGACTTCCTAGCTCCTATGATTAAGCAGGATATGACAGAAGA-CCCTAGCTTACGTCA 37692
||||| ||||||||||| ||| || ||| | | | || | ||| | ||||
Sbjct 84 GGTGATAAACTAGCTCCTATTATTCGTCATGATTT-AGATAACAACCCAATGTTACAGAT 142
Query 37693 TGGTTATGGTATTGATGGTACACAAGGTGCTCCTACTTGTCCTGAGATGTATGACGATGA 37752
||| |||| ||||||| | || ||||| || ||||| |||||| | ||||
Sbjct 143 AGGTGGTGGTCTTGATGGCTCTATGGGACAGCCTACCTGCCCTGAAATGTATACCAATGA 202
Query 37753 GAAGCTTATTGAGAAGGAAGTATCACAAGGTACAGCTAAATTCCAGTTACAGTTTATGCT 37812
| | | |||||||||| | |||| |||| |||||| ||| | |||||||||||||
Sbjct 203 TATCTTGAATGAGAAGGAATTGGCACAGGGTAAAGCTAAGTTCATGCTACAGTTTATGCT 262
Query 37813 CAATACAAGACTGCTGGACGCTGACAGATATCCTTTAAAACTAAATCAGTTAATCAT 37869
||||| |||| || || ||||||| || | ||||||| | | ||||||||
Sbjct 263 TAATACTGGACTTGCAGATGCAGACAGATTCCCACTCAAACTAAGTGACTTAATCAT 319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141622677200340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |