Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq509673 140 4e-28 seq511551 109 6e-19 seq449735 105 7e-18 >seq509673 Length=441 Score = 140 bits (154), Expect = 4e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 143094 TTATTAAGCTGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCCCTTGTTG 143153 ||||| | ||| || || || |||||||| | || |||||| ||||| ||||| ||| Sbjct 219 TTATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTA 278 Query 143154 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 143213 || ||||| || | ||| |||||||| ||||||||||| || ||| | || || Sbjct 279 TTTTTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCT 338 Query 143214 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 143273 || |||||||||| || |||||||| ||| |||||||||| |||||||| |||| || Sbjct 339 GCACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAG 398 Query 143274 AACGGAATAACACCAGTATG 143293 || || ||| ||| ||||| Sbjct 399 AATGGGATACAACCCGTATG 418 >seq511551 Length=634 Score = 109 bits (120), Expect = 6e-19 Identities = 329/491 (67%), Gaps = 28/491 (6%) Strand=Plus/Minus Query 39613 AGAATCTAATGCAATACGAGGAAGATTCAGTGTTACAACACCAAGATTATTACGTCCATC 39672 ||| | || ||||| |||||| || || | |||| ||||| | || ||||||||||| Sbjct 508 AGATTGTAGTGCAACACGAGGTAGGTTTAAGCTTACCACACCTAAGTTGTTACGTCCATC 449 Query 39673 AAGAATTTCATTACCAGTCGAATCTTTCCATACGCTCAA--GAAACTACGGCAACCCAT- 39729 || | ||| ||||||| || ||||| |||| ||| | ||| || | ||| ||||| Sbjct 448 AAACACTTCCTTACCAGAAGAGTCTTT--ATACTCTCCAAGGAAGCTCCTGCAGCCCATG 391 Query 39730 --TGGAGAAACAGGAACAGATGAGCCGGTGATAGCTTTATTGTTCTTAGCTGAAATAATA 39787 || || | | ||| | || | | ||| || ||| ||| ||||| Sbjct 390 CTTGCCTTAAAACCACCAGT--AACCTCTACAATCTTA-----TCGTAGTTGA--TAATA 340 Query 39788 TCAGGATACATCCTTTTGCTTGCACACTCTAGAGCAAGCTGCTTGATATCATAGTTCGGG 39847 ||||| ||||| | || || |||||||||||||| | ||| || |||| |||||| ||| Sbjct 339 TCAGGGTACATACGCTTACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGG 280 Query 39848 TCGTCTT-TATAAAGATTAACACCTTCTTCAACAAACATAACAAGCTTAGGGAAAATAGG 39906 || || | | ||||| || ||||| |||| || | | | |||||||||||| | | Sbjct 279 TCTTCCTGTTTAAAG-TTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAATACCGC 221 Query 39907 AGT--TATTCCAT-CACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAAT 39963 || | || || ||| | ||| ||||||||||| | || || | ||||||||| Sbjct 220 TGTCCTCTTTGATGCAC--CTAAG-CCTTTAATACGCACCTCAAGGATGGATTTCTGAAT 164 Query 39964 CATTCGTTCAGT-CCAGTCAGTTCCCGTACCAAATGTAATTGTCACAAAAGGGG-TCTGT 40021 | | | | | ||| ||| || |||||| | || |||||||||| | ||| Sbjct 163 TA-GCTTAGACTCCCAACAAGTACCTAAACCAAAACCTACCGT-ACAAAAGGGGCTTTGT 106 Query 40022 CCGTTTGAACTAAAGAGAGTGTTTACTTCATATTCATAAGCTTGGAATGCATCATATACA 40081 || |||| | | ||||| | ||| || ||| | |||||| |||||||| Sbjct 105 CCATTTGCTGTGTGTAAGGTGTTAATTTCGTACTCAAGACTTTGGAAAGCATCATAAGTC 46 Query 40082 TCTTTTTCTGT 40092 ||||| ||||| Sbjct 45 TCTTTCTCTGT 35 >seq449735 Length=3187 Score = 105 bits (116), Expect = 7e-18 Identities = 281/421 (67%), Gaps = 10/421 (2%) Strand=Plus/Minus Query 143087 CATCAGGTTATTAAGCTGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCC 143146 ||| || ||||||| ||| || || || || | ||| | | ||||| || ||||| || Sbjct 444 CATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCC 385 Query 143147 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATA--ATAA 143204 ||| || || || || | | ||||| ||||| |||||||| | || || | || Sbjct 384 GCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAA 325 Query 143205 GCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAA 143264 | || || ||||||||||| | || ||||| |||||| |||||| || ||||| || Sbjct 324 G--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAG 267 Query 143265 TGTTTCCAGAACGGAATAACACCAGTATGGCGAACTTCACCCATACCGATTTTCG-AACC 143323 || || | || |||||| ||| |||||| |||| |||| ||| | | | ||| Sbjct 266 TGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTC-GCCATTGCGAATGTGGCTACC 208 Query 143324 TTCAGCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATA--TATTCG 143381 |||||||| ||| |||| ||||| || || ||||| || | |||| |||| Sbjct 207 CAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACG-TTGC-GATACGTATTTA 150 Query 143382 ATGATTGAATTGGCCGTCTTATTAATTGACTTCAGGGAGTCAGCAGCTTCGATAACCACA 143441 | |||| | | || |||||||| | ||| ||| || || || | ||| Sbjct 149 ACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACA 90 Query 143442 CAGGAACTGAACTGCCTGGTAGGTGTTCTGGCGCCCGCCATGATGGGCGTGGGCAACGAA 143501 || || || ||||| | || || || | | || ||||| || ||||| || | ||| Sbjct 89 CACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAA 30 Query 143502 A 143502 | Sbjct 29 A 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542912548697440