Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028925.1
Length=170822
Score E
Sequences producing significant alignments: (Bits) Value
seq509673 140 4e-28
seq511551 109 6e-19
seq449735 105 7e-18
>seq509673
Length=441
Score = 140 bits (154), Expect = 4e-28
Identities = 151/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 143094 TTATTAAGCTGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCCCTTGTTG 143153
||||| | ||| || || || |||||||| | || |||||| ||||| ||||| |||
Sbjct 219 TTATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTA 278
Query 143154 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 143213
|| ||||| || | ||| |||||||| ||||||||||| || ||| | || ||
Sbjct 279 TTTTTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCT 338
Query 143214 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 143273
|| |||||||||| || |||||||| ||| |||||||||| |||||||| |||| ||
Sbjct 339 GCACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAG 398
Query 143274 AACGGAATAACACCAGTATG 143293
|| || ||| ||| |||||
Sbjct 399 AATGGGATACAACCCGTATG 418
>seq511551
Length=634
Score = 109 bits (120), Expect = 6e-19
Identities = 329/491 (67%), Gaps = 28/491 (6%)
Strand=Plus/Minus
Query 39613 AGAATCTAATGCAATACGAGGAAGATTCAGTGTTACAACACCAAGATTATTACGTCCATC 39672
||| | || ||||| |||||| || || | |||| ||||| | || |||||||||||
Sbjct 508 AGATTGTAGTGCAACACGAGGTAGGTTTAAGCTTACCACACCTAAGTTGTTACGTCCATC 449
Query 39673 AAGAATTTCATTACCAGTCGAATCTTTCCATACGCTCAA--GAAACTACGGCAACCCAT- 39729
|| | ||| ||||||| || ||||| |||| ||| | ||| || | ||| |||||
Sbjct 448 AAACACTTCCTTACCAGAAGAGTCTTT--ATACTCTCCAAGGAAGCTCCTGCAGCCCATG 391
Query 39730 --TGGAGAAACAGGAACAGATGAGCCGGTGATAGCTTTATTGTTCTTAGCTGAAATAATA 39787
|| || | | ||| | || | | ||| || ||| ||| |||||
Sbjct 390 CTTGCCTTAAAACCACCAGT--AACCTCTACAATCTTA-----TCGTAGTTGA--TAATA 340
Query 39788 TCAGGATACATCCTTTTGCTTGCACACTCTAGAGCAAGCTGCTTGATATCATAGTTCGGG 39847
||||| ||||| | || || |||||||||||||| | ||| || |||| |||||| |||
Sbjct 339 TCAGGGTACATACGCTTACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGG 280
Query 39848 TCGTCTT-TATAAAGATTAACACCTTCTTCAACAAACATAACAAGCTTAGGGAAAATAGG 39906
|| || | | ||||| || ||||| |||| || | | | |||||||||||| | |
Sbjct 279 TCTTCCTGTTTAAAG-TTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAATACCGC 221
Query 39907 AGT--TATTCCAT-CACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAAT 39963
|| | || || ||| | ||| ||||||||||| | || || | |||||||||
Sbjct 220 TGTCCTCTTTGATGCAC--CTAAG-CCTTTAATACGCACCTCAAGGATGGATTTCTGAAT 164
Query 39964 CATTCGTTCAGT-CCAGTCAGTTCCCGTACCAAATGTAATTGTCACAAAAGGGG-TCTGT 40021
| | | | | ||| ||| || |||||| | || |||||||||| | |||
Sbjct 163 TA-GCTTAGACTCCCAACAAGTACCTAAACCAAAACCTACCGT-ACAAAAGGGGCTTTGT 106
Query 40022 CCGTTTGAACTAAAGAGAGTGTTTACTTCATATTCATAAGCTTGGAATGCATCATATACA 40081
|| |||| | | ||||| | ||| || ||| | |||||| ||||||||
Sbjct 105 CCATTTGCTGTGTGTAAGGTGTTAATTTCGTACTCAAGACTTTGGAAAGCATCATAAGTC 46
Query 40082 TCTTTTTCTGT 40092
||||| |||||
Sbjct 45 TCTTTCTCTGT 35
>seq449735
Length=3187
Score = 105 bits (116), Expect = 7e-18
Identities = 281/421 (67%), Gaps = 10/421 (2%)
Strand=Plus/Minus
Query 143087 CATCAGGTTATTAAGCTGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCC 143146
||| || ||||||| ||| || || || || | ||| | | ||||| || ||||| ||
Sbjct 444 CATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCC 385
Query 143147 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATA--ATAA 143204
||| || || || || | | ||||| ||||| |||||||| | || || | ||
Sbjct 384 GCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAA 325
Query 143205 GCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAA 143264
| || || ||||||||||| | || ||||| |||||| |||||| || ||||| ||
Sbjct 324 G--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAG 267
Query 143265 TGTTTCCAGAACGGAATAACACCAGTATGGCGAACTTCACCCATACCGATTTTCG-AACC 143323
|| || | || |||||| ||| |||||| |||| |||| ||| | | | |||
Sbjct 266 TGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTC-GCCATTGCGAATGTGGCTACC 208
Query 143324 TTCAGCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATA--TATTCG 143381
|||||||| ||| |||| ||||| || || ||||| || | |||| ||||
Sbjct 207 CAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACG-TTGC-GATACGTATTTA 150
Query 143382 ATGATTGAATTGGCCGTCTTATTAATTGACTTCAGGGAGTCAGCAGCTTCGATAACCACA 143441
| |||| | | || |||||||| | ||| ||| || || || | |||
Sbjct 149 ACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACA 90
Query 143442 CAGGAACTGAACTGCCTGGTAGGTGTTCTGGCGCCCGCCATGATGGGCGTGGGCAACGAA 143501
|| || || ||||| | || || || | | || ||||| || ||||| || | |||
Sbjct 89 CACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAA 30
Query 143502 A 143502
|
Sbjct 29 A 29
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542912548697440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |