Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028940.1
Length=170286
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 131 2e-25
>seq449735
Length=3187
Score = 131 bits (144), Expect = 2e-25
Identities = 321/480 (67%), Gaps = 19/480 (4%)
Strand=Plus/Minus
Query 145189 ACATCAG---GACTAAAAAGAGTAATGTAATCGTTTTTAATCAGACGTTCAATCATCAAA 145245
||||||| | ||||| | |||||||| |||| |||||| | ||| ||| |
Sbjct 497 ACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGT 438
Query 145246 TCATTGATTTGAATTCCATAATCAAGATGCCTGATTCGATTTTCTTCTACGCCTTTGTTG 145305
| ||| | || | || ||||| | ||| | | || || || || || || |||
Sbjct 437 TTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTA 378
Query 145306 TTTTTAAGGACTAAAAGATTTTCTGCTTCAAGGTGCCACATTGGGTAATATAATGTTGCC 145365
|||||||| ||||| || |||||| |||| | ||||| | ||||| | || |||||
Sbjct 377 TTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCT 318
Query 145366 GCACCACCACGAATTCCACCTTGAGAACAACTTTTAACAGAAGCC---AAGTGAGTTTTC 145422
|| || ||||| | || ||||| ||||| |||||||| | | ||||| | |
Sbjct 317 GCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTAT-- 260
Query 145423 CAGAATGGAATAACACCCGTATGCCGCACTTCACCGTGACCAATCTTAGAACCTTCAGCG 145482
| || |||||| ||||||||| | |||| || | | ||| | ||| ||
Sbjct 259 -AAAAAGGAATACAACCCGTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCA 201
Query 145483 CGATACATTCCGGCGTTAACACCAATACCAGCGCGTTTACTGATA--TATTTGATAAT-G 145539
||| || ||||||| ||||| || || |||| |||| ||||| | ||| |
Sbjct 200 CGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGC--GATACGTATTTAACAATTG 143
Query 145540 CTTTCGT--TCACTTTGTTAATTGAATTTAGCGAATCGCCACCTTCAATTACTACACATG 145597
| || | | ||||||||||| || ||||||| || |||| |||||| |
Sbjct 142 CAGACGAGGTGGC---GTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACG 86
Query 145598 AACTGAATTGACGAGTTGGTGTACGTACACCTGCCATAATAGGAGTAGGCAAAGAAATTT 145657
| || || || || ||||| ||||| |||||||||||||| || ||||| | |||||||
Sbjct 85 AGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAATTT 26
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541208615460320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |