Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq509954 152 6e-32 >seq509954 Length=433 Score = 152 bits (168), Expect = 6e-32 Identities = 299/436 (69%), Gaps = 11/436 (3%) Strand=Plus/Plus Query 106829 GCTCAAGACCTCAAAGCAATCCATGGATTGAATGCAGAAGCTGAGTTAGCAAACATTCTA 106888 ||||| || | ||||| | ||||| ||| | ||||||| || | ||||| ||||| Sbjct 3 GCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTCTT 62 Query 106889 TCAACTGAGATTCTTGCTGAGATCAACAGAGAAGTGATCAGAACAATCTATCTTGTTGCT 106948 |||||||| |||||||| || || ||| | || | || | || | ||| ||| Sbjct 63 TCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTGCA 122 Query 106949 GAACAGGGTGCTGTTGCAAAC--GTT--GCCACTGCTGGTAATTTTGACTTAGACATTGA 107004 ||| ||||| ||||| ||| || | ||||||| || || |||||| | || Sbjct 123 AAACCTGGTGCA----CAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGA 178 Query 107005 CAGTAATGGTAGATGGTCTGTTGAGAAGTTCAAAGGACTTCTATTCCAGATTGAAAGGGA 107064 |||||| | ||||| || || || |||||||||||| | ||||| |||||| | || Sbjct 179 TGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGA 238 Query 107065 TGCAAATGCTATTGC-ACAGAGAACACGTCGCGGAAAAGGTAACATGATCCTTTGCTCTG 107123 ||| || || || | ||| ||| | || || ||||||||| | || | || || Sbjct 239 TGCTAACCAAATCGCTAAAGA-AACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCAT 297 Query 107124 CTGATGTTGCATCTGCATTAACAATGGCTGGTATCTTAGACTACACACCTGCACTTAATG 107183 |||| || || |||||||| | ||||| ||| | || | | ||||||| | || Sbjct 298 CTGACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCTATCTCTG 357 Query 107184 CTAA-CTTAAATGTTGATGACACTGGTAACACATTTGCTGGTACAATCAATGGTAAGTTC 107242 | || || || || ||||| || ||||| |||||||||||| | || ||| ||| Sbjct 358 CAAATCTACAAAGTAGATGATACCGGTAATACATTTGCTGGTGTTCTAAACGGTCGTTTC 417 Query 107243 AGAGTCTACATTGACC 107258 | ||| | |||||||| Sbjct 418 AAAGTATTCATTGACC 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627279496794320