Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028977.1 Length=41054 Score E Sequences producing significant alignments: (Bits) Value seq512931 163 7e-36 >seq512931 Length=538 Score = 163 bits (180), Expect = 7e-36 Identities = 212/289 (73%), Gaps = 13/289 (4%) Strand=Plus/Plus Query 38942 CCGGACCACAGCCCGTCAGTTAAGTCTGTGGGTATTACGGGTCAGCTTACTGGTAGCCGT 39001 || ||||||||||| || || ||||| |||||| |||| || | |||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 39002 GCTGATATCATCATTGCGGATGACGTGGAGATTCCCGGTAACTCTGCAACCCAAGGTGCC 39061 ||||| ||| |||||||||||||||| ||| | ||||| ||||||| || || || | Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACA--GTCCG 127 Query 39062 CGAGAGA--AACTCTGGACGCTGGTTCAGGAGTTCGCCGCACTGTTGAAACCTCTACCGA 39119 | || || | || | |||||| |||| |||| || | |||| ||| || Sbjct 128 CAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GA 182 Query 39120 CTAGCCGTGTTATCTATCTGGGTACCCCTCAGACCGAGATGACGCTCTACAAGGAACTTG 39179 | || | ||||| |||| ||||| |||||||| ||||| ||||||| |||||||| Sbjct 183 CGGTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241 Query 39180 AGGACAACCGTGGGTACTCCACCATCATCTGGCCTGCACAGTATCCTCG 39228 ||| |||| || ||||| || | ||||||||||||| || ||||| Sbjct 242 AGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130432148378784