Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028977.1
Length=41054
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 163 7e-36
>seq512931
Length=538
Score = 163 bits (180), Expect = 7e-36
Identities = 212/289 (73%), Gaps = 13/289 (4%)
Strand=Plus/Plus
Query 38942 CCGGACCACAGCCCGTCAGTTAAGTCTGTGGGTATTACGGGTCAGCTTACTGGTAGCCGT 39001
|| ||||||||||| || || ||||| |||||| |||| || | ||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69
Query 39002 GCTGATATCATCATTGCGGATGACGTGGAGATTCCCGGTAACTCTGCAACCCAAGGTGCC 39061
||||| ||| |||||||||||||||| ||| | ||||| ||||||| || || || |
Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACA--GTCCG 127
Query 39062 CGAGAGA--AACTCTGGACGCTGGTTCAGGAGTTCGCCGCACTGTTGAAACCTCTACCGA 39119
| || || | || | |||||| |||| |||| || | |||| ||| ||
Sbjct 128 CAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GA 182
Query 39120 CTAGCCGTGTTATCTATCTGGGTACCCCTCAGACCGAGATGACGCTCTACAAGGAACTTG 39179
| || | ||||| |||| ||||| |||||||| ||||| ||||||| ||||||||
Sbjct 183 CGGTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241
Query 39180 AGGACAACCGTGGGTACTCCACCATCATCTGGCCTGCACAGTATCCTCG 39228
||| |||| || ||||| || | ||||||||||||| || |||||
Sbjct 242 AGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG 287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130432148378784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |