Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_028987.1
Length=41243
Score E
Sequences producing significant alignments: (Bits) Value
seq516303 134 4e-27
>seq516303
Length=336
Score = 134 bits (148), Expect = 4e-27
Identities = 219/314 (70%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 29472 GAATTAGATCAGTTCCAATTCTGGAAAGGTTTAATGAGTTCATGGTATACACAAGAAGCT 29531
|| || || |||||| | ||||||||| |||||| | ||||| || ||
Sbjct 314 GAGTTGGAACAGTTCAAGTTCTGGAAAACCCAGATGAGTGCTTGGTACACTGCTGAGAAC 255
Query 29532 AAACGTGTTGGTCGTCAACATGGTATCTTGAGTCGTATTCAAGAACTGGTTAAATATCAG 29591
|||||| |||||||| |||||| ||||| | ||| | | | |||||
Sbjct 254 AAACGTAAGGGTCGTCATGTAGGTATCCTGAGTAAGCTCACAGAGTTAGCTCGTTATCAA 195
Query 29592 GACGAAGAACGTTTATACTTTCCAACATTTATTGATTGGAGAGGTCGTCTTTATTTCCGT 29651
||||| | | | ||||| ||||| |||||||||||| | || || | || || |
Sbjct 194 GACGAGGTAGCCCTGTACTTCCCAACCTTTATTGATTGGCGTGGACGATTGTACTTTAGA 135
Query 29652 AGTAGTATTAACCCACAGTCCAACGATTGTATTAAAGGTTGTCTTGAATTTGCAGAGGGT 29711
|||| | || |||||||| | | ||| | |||||||||||||| || || ||||||
Sbjct 134 AGTAACTTGAATCCACAGTC-ATCTATTCAGTCAAAGGTTGTCTTGAGTTCGCTGAGGGT 76
Query 29712 AAACCTTTAGGTAAAACTGGACTTAAATGGTTAAAGATTCATGTTGCAAACTGTTGTGGT 29771
|||| | ||||| | ||| |||| |||||||| |||||| || ||||| ||||||
Sbjct 75 AAACGTCTAGGTTCAGATGGTCTTATGTGGTTAAAAGCTCATGTAGCTAACTGCTGTGGT 16
Query 29772 TATGATAAACATGA 29785
||||||||||| ||
Sbjct 15 TATGATAAACACGA 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 131033174223420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |