Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028987.1 Length=41243 Score E Sequences producing significant alignments: (Bits) Value seq516303 134 4e-27 >seq516303 Length=336 Score = 134 bits (148), Expect = 4e-27 Identities = 219/314 (70%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 29472 GAATTAGATCAGTTCCAATTCTGGAAAGGTTTAATGAGTTCATGGTATACACAAGAAGCT 29531 || || || |||||| | ||||||||| |||||| | ||||| || || Sbjct 314 GAGTTGGAACAGTTCAAGTTCTGGAAAACCCAGATGAGTGCTTGGTACACTGCTGAGAAC 255 Query 29532 AAACGTGTTGGTCGTCAACATGGTATCTTGAGTCGTATTCAAGAACTGGTTAAATATCAG 29591 |||||| |||||||| |||||| ||||| | ||| | | | ||||| Sbjct 254 AAACGTAAGGGTCGTCATGTAGGTATCCTGAGTAAGCTCACAGAGTTAGCTCGTTATCAA 195 Query 29592 GACGAAGAACGTTTATACTTTCCAACATTTATTGATTGGAGAGGTCGTCTTTATTTCCGT 29651 ||||| | | | ||||| ||||| |||||||||||| | || || | || || | Sbjct 194 GACGAGGTAGCCCTGTACTTCCCAACCTTTATTGATTGGCGTGGACGATTGTACTTTAGA 135 Query 29652 AGTAGTATTAACCCACAGTCCAACGATTGTATTAAAGGTTGTCTTGAATTTGCAGAGGGT 29711 |||| | || |||||||| | | ||| | |||||||||||||| || || |||||| Sbjct 134 AGTAACTTGAATCCACAGTC-ATCTATTCAGTCAAAGGTTGTCTTGAGTTCGCTGAGGGT 76 Query 29712 AAACCTTTAGGTAAAACTGGACTTAAATGGTTAAAGATTCATGTTGCAAACTGTTGTGGT 29771 |||| | ||||| | ||| |||| |||||||| |||||| || ||||| |||||| Sbjct 75 AAACGTCTAGGTTCAGATGGTCTTATGTGGTTAAAAGCTCATGTAGCTAACTGCTGTGGT 16 Query 29772 TATGATAAACATGA 29785 ||||||||||| || Sbjct 15 TATGATAAACACGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131033174223420