Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq458775 87.8 4e-12 seq326422 84.2 4e-11 >seq458775 Length=389 Score = 87.8 bits (96), Expect = 4e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1031 ATCCCATGGCACATCCCCGAAGACTTCAAATGGTTCAAAGAGAAAACCTTGGGCCATCCA 1090 || || ||||| | || | || ||||||| ||||| | | ||||||||| | || Sbjct 229 ATGCCGTGGCATTTGCCTGCGGATTTCAAATATTTCAAGGCCACCACCTTGGGCAAGCCG 170 Query 1091 GTGATCATGGGTCGTAAGACCTGGGAATCCATTGGTCGTCCTTTGCCGGGTCGTCTGAAT 1150 | |||||||||||||| |||||||| || | || || || |||||||||||| |||| Sbjct 169 ATCATCATGGGTCGTAAAACCTGGGATTCGTTGGGCCGCCCGTTGCCGGGTCGTTTGAAC 110 Query 1151 ATCGTGGTCAG 1161 | |||||||| Sbjct 109 CTGGTGGTCAG 99 >seq326422 Length=2068 Score = 84.2 bits (92), Expect = 4e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 294861 TGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTACC 294920 |||||||| | | || |||||| || ||||||||||||||||||||||||||||||| Sbjct 576 TGGTGCCGACTAACCGAGTCGAACG-GTTGACCTACTGATTACAAGTCAGTTGCTCTACC 634 Query 294921 AGCTGAGCTATAACGGCA 294938 |||||||||| ||||| Sbjct 635 AGCTGAGCTAAGTCGGCA 652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982673217049806