Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_029017.1
Length=73420
Score E
Sequences producing significant alignments: (Bits) Value
seq486019 250 1e-61
seq488807 161 5e-35
seq255804 145 4e-30
seq505100 87.8 8e-13
>seq486019
Length=823
Score = 250 bits (276), Expect = 1e-61
Identities = 439/641 (68%), Gaps = 10/641 (2%)
Strand=Plus/Plus
Query 21417 CGGTCTTCATCCGACATGATGCGAAGCATCAGTTCTTGGTTGAACGTGTCGATCTTCCCT 21476
|| || || || |||||||| || | ||| || |||||||| || || || | ||| |||
Sbjct 177 CGATCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTAAATGTATCCACCTTACCT 236
Query 21477 GCCTTGAGTGCAGCCTCGTACTTCTTCTTCACGAAGTCGTAGGTGAAACGGTCAGGCCAT 21536
||||| | || ||| || | || || | || | |||||| ||||||||
Sbjct 237 GCCTTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATATGAGAAACGATCAGGCCAC 296
Query 21537 GCACCACGGAAATCTTTTTCCGAGCATGGGAACTTCTCGCACACCGGGTAGACGTTCACC 21596
||||| | || ||||| || || || || || | ||||| ||||| ||||| ||
Sbjct 297 GCACCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACACACAGGGTACACGTTAACT 356
Query 21597 TTCCAGGCACCGGACTCGACTGCTTTGTACAGCGGATCCTTGGCGTTAAACGGTGTACCC 21656
||| ||||| ||||| ||||||||||| | ||||| | |||||| || |||||
Sbjct 357 GCCCAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGCGAGTTAAAGGGAGTACCT 416
Query 21657 GACCAGATGATCATGTTACGGGTTGGGTGCAATGCGTAGTCCACCGCCTTGTAAACCGTG 21716
|||||||| | | | || |||||| ||||||||||| | |||||||| || ||
Sbjct 417 GACCAGATTACCTTAGAGCGTATTGGGTCTAATGCGTAGTCAATAGCCTTGTACACTGTA 476
Query 21717 TCTTCGATAGACGCAATCACAGTAGGCGAGCGAGCATCTTCGTCTGAAACCAGGTCATCG 21776
||||| | || | ||| || |||| || | |||||||| || || | | ||||||
Sbjct 477 TCTTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTCATCCGATATTAAGTCATCT 536
Query 21777 AGAACCGCAAGCTGGGGGCGCTTACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCA 21836
|| || |||||| || || ||||||||| || |||||||| ||||| ||||| ||
Sbjct 537 AGTACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACCACGTACACCGGTCTTTGCG 596
Query 21837 CCGTAGCCTTTGACGATGAAGACGTTCCCTTCGATGTTGACGAACTTCCACCGAATGTCG 21896
|| || ||||| ||||| || ||| || || ||||| || | ||| || || ||
Sbjct 597 CCATAACCTTTTACGATAAATCGGTTACCATCAATGTTATTAAATTCCCAGCGTATATCA 656
Query 21897 GTGAAATCTGTACCACCGCCGGGAGGCAGGAACTGCTGCAAGAAAGCACTGTTCTCCCAG 21956
|||| ||| | ||| | ||| | || || | ||| |||||
Sbjct 657 GTGA----------ACCTAGTGTAGGTACATACTTAAGTAAAAATTCTGAGTTTTCCCAA 706
Query 21957 CGGTACTCCAAGTTCTTCCGCATGTTCTTGACCCCGTTATCGATGGAGTCGGATACATAC 22016
||| ||||||||||||| ||||||||||| || ||||| || || || || ||||||
Sbjct 707 CGGAACTCCAAGTTCTTACGCATGTTCTTAACACCGTTCTCTATACTATCTGAAACATAC 766
Query 22017 AGAGCAAGGTCTACCTTCCCGAAACCAGGAAGATCACCATA 22057
||||| | | || || || || || || | ||||| ||
Sbjct 767 AGAGCCAAGGGAACTTTACCAAACCCGGGGATGTCACCGTA 807
>seq488807
Length=774
Score = 161 bits (178), Expect = 5e-35
Identities = 237/334 (71%), Gaps = 6/334 (2%)
Strand=Plus/Minus
Query 21385 CGTACCACTGCAACTCGTTGTCCTGGATCAAGCGGTCTTCATCCGACATGATGCGAAGCA 21444
||||||| | | ||| | || | || || | |||||| || ||||| || | ||||
Sbjct 331 CGTACCAATTAATCTCACTATCTTTAATTAATCTGTCTTCTTCTGACATAATTCTTAGCA 272
Query 21445 TCAGTTCTTGGTTGAACGTGTCGATCTTCCCTGCCTTGAGTGCAGCCTCG---TACTTCT 21501
||| |||||||| || | || | ||| ||||| || | |||| | | || | ||
Sbjct 271 TCAACTCTTGGTTAAAAGAATCCACCTTACCTGCTTTAA---CAGCTTTGGTGTATTGCT 215
Query 21502 TCTTCACGAAGTCGTAGGTGAAACGGTCAGGCCATGCACCACGGAAATCTTTTTCCGAGC 21561
|| | || |||| || ||||| || |||||||||| || ||| |||| | || |
Sbjct 214 TCATTACATAGTCATACGTGAAGCGATCAGGCCATGAGCCTTTGAACTCTTCTCTCGTAC 155
Query 21562 ATGGGAACTTCTCGCACACCGGGTAGACGTTCACCTTCCAGGCACCGGACTCGACTGCTT 21621
| || || ||||| ||||| ||||| || || || | ||| || || ||||| |||||||
Sbjct 154 AAGGAAATTTCTCACACACAGGGTACACATTTACGTACCAAGCTCCTGACTCAACTGCTT 95
Query 21622 TGTACAGCGGATCCTTGGCGTTAAACGGTGTACCCGACCAGATGATCATGTTACGGGTTG 21681
|||||| || || |||||||||||| ||||| |||||||| || | ||| |
Sbjct 94 TGTACAATGGGTCACGGGCGTTAAACGGAGTACCTGACCAGATTATTTTAGACTTGGTAG 35
Query 21682 GGTGCAATGCGTAGTCCACCGCCTTGTAAACCGT 21715
| ||||||||||| ||||| || || ||||| ||
Sbjct 34 GATGCAATGCGTAATCCACTGCTTTATAAACTGT 1
>seq255804
Length=3791
Score = 145 bits (160), Expect = 4e-30
Identities = 441/673 (66%), Gaps = 10/673 (1%)
Strand=Plus/Plus
Query 21561 CATGGGAACTTCTCGCACACCGGGTAGACGTTCACCTTCCAGGCACCGGACTCGACTGCT 21620
|| || |||||||| || | || || || | || | ||| ||||| || || | |||
Sbjct 2297 CAAGGAAACTTCTCACATATAGGATATACACTTACATCCCATGCACCAGATTCCATAGCT 2356
Query 21621 TTGTACAGCGGATCCTTGGCGTTAAACGGTGTACCCGACCAGATGATCATGTTACGGGTT 21680
| |||| ||||| || || ||||| || ||||| ||| || || | || ||
Sbjct 2357 TCATACAAAGGATCATTAGCATTAAAGGGAGTACCAAGCCATATAGTCTTAG-ACTTCTT 2415
Query 21681 -GGGTGCAATGCGTAGTCCACCGCCTTGTAAACCGTGTCTTCGATAGACGCAATCACAGT 21739
||||| | ||| || | | |||| || ||||||| |||| ||| || ||
Sbjct 2416 AGGGTGAAGTGCATACTTAATAGCCTGACCTACTGTGTCTTTAATAGCTTGAATAACTGT 2475
Query 21740 AGGCGAGCGAGCATCTTCGTCTGAAACCAGGTCATCGAGAACCGCAAGCTGGGGGCGCTT 21799
||| || || | || || | ||| | |||||| || | || | ||| ||||| |
Sbjct 2476 AGGTGAACGTGAGTCATCATTACTAACTAAGTCATCTAGGATAGCCATCTGTGGGCGTGT 2535
Query 21800 ACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACCGTAGCCTTTGACGATGAAGAC 21859
||||||||||||| ||||||| | ||| ||||||||||| || || || || | |||
Sbjct 2536 ACCCATCTCCTTCACACCACGAATACCTGTCTTGGCACCATACCCCTTTACTACGAATTT 2595
Query 21860 GTTCCCTTCGATGTTGACGAACTTCCACCGAATGTCGGTGAAATCTGTACCACCGCCGGG 21919
| || | || || |||| ||||| ||| || ||| | || || || |
Sbjct 2596 AGTACCATTAATATTCTTAAACTCCCACCTAATATCTGTG--AGCTTTA-ATCCTTCTTT 2652
Query 21920 AGGCAGGAACTGCTGCAAGAAAGCACTGTTCTCCCAGCGGTACTCCAAGTTCTTCCGCAT 21979
||| || ||| ||| ||||| |||| ||||||| || |||| |||||||| | |||
Sbjct 2653 AGGTAGATACTTCTGTAAGAACTCACTACTCTCCCAACGAGACTCTAAGTTCTTTCTCAT 2712
Query 21980 GTTCTTGACCCCGTTATCGATGGAGTCGGATACATACAGAGCAAGGTCTACCTTCCCGAA 22039
||| | |||||||| || || ||||||||||| | | | ||||| || ||
Sbjct 2713 TGACTTAATACCGTTATCAATACTATCTGATACATACAGCACTAATTTAACCTTACCAAA 2772
Query 22040 ACCAGGAAGATCACCATAGACC-CCCAGGTACAGAAACAGGTACTCACCCATCAGAGTGG 22098
|| | || || ||| | || || | | ||||||||| |||| || || |
Sbjct 2773 GGACGGCATTCTGCCGTACACCGCTAAGATATAAGATAAGGTACTCAGCCATTAGTGTAG 2832
Query 22099 TCTTGGCCGCACCACGGAAAACCATGTTGGCGATACG--TCGTTCGCCACTGCCTACCTG 22156
|||| | |||||||| || | |||||| || |||| || | |||| ||| ||
Sbjct 2833 TCTTACCTGCACCACGAAAGATCATGTTAGC--TACGTTTCTTAATCCACCATCTAACTT 2890
Query 22157 ATCGAGCATCCGGTAATGGAGAACCGGAGTCTTGTTCTCCTCGCCTTGCCCGCCGTTCAC 22216
||| | |||| | || | ||| || | ||||||||| || | || || || ||
Sbjct 2891 ATCTAACATCTTTAAGTGAATAACAGGTGATACGTTCTCCTCACCCTCACCACCATTAAC 2950
Query 22217 CAGCTTGATGAAC 22229
||||| || |||
Sbjct 2951 TAGCTTAATAAAC 2963
>seq505100
Length=723
Score = 87.8 bits (96), Expect = 8e-13
Identities = 299/460 (65%), Gaps = 16/460 (3%)
Strand=Plus/Plus
Query 21387 TACCACTGCAACTCGTTGTCCTGGATCAAG-CGGTCTTCATCCGACATGATGCGAAGCAT 21445
||||||||||| || | || || | |||| | ||||| || ||| || | |||||
Sbjct 81 TACCACTGCAAATCACTATCATGTA-CAAGTCTATCTTCTTCACTCATAATCTGTAGCAT 139
Query 21446 CAGTTCTTGGTTGAACGTGTCGATCTTCCCTGCCTTGAG-TGCAG---CCTCGTACTTCT 21501
|| ||||||| ||| | ||| | | |||| || ||| | |||||| ||
Sbjct 140 AAGCTCTTGGTAGAA----ACCATCAGCGTTACCTTCAGCAACAGACTCTTCGTACATCG 195
Query 21502 TCTTCACGAAGTCGTAGGTGAAACGGTCAGGCCATGCACCACGGAAATCTTTTTCCGAGC 21561
| | || | ||||| || |||||| |||||| || || ||| |||| |
Sbjct 196 TACTAACATACTCGTAACCAAAGCGGTCATCCCATGCGCCTTTAAACTCTGATTCCTCAC 255
Query 21562 ATGGGAACTTCTCGCACACCGGGTAGACGTTCACCTTCCAGGCACCGGACTCGACTGCTT 21621
| || |||||||| || || || || || || | ||| ||||| ||||| | ||||
Sbjct 256 AAGGAAACTTCTCACATACTGGATAAACACCTACATCCCAAGCACCAGACTCAATAGCTT 315
Query 21622 TGTACAGCGGATCCTTGGCGTTAAACGGTGTACCCGACCAGATGATCAT---GTTACGGG 21678
|| | ||||| || || ||||| || ||||| ||| || || | ||| |
Sbjct 316 GATATAAAGGATCGTTAGCATTAAAGGGAGTACCAAGCCATATTCTCTTAGACTTA---G 372
Query 21679 TTGGGTGCAATGCGTAGTCCACCGCCTTGTAAACCGTGTCTTCGATAGACGCAATCACAG 21738
||||||| || || || | | |||| ||| || || | ||||| ||| |||
Sbjct 373 TTGGGTGTAACGCATACTTAATAGCCTGACCAACTGTATCCTTAATAGATTGAATAGCAG 432
Query 21739 TAGGCGAGCGAGCATCTTCGTCTGAAACCAGGTCATCGAGAACCGCAAGCTGGGGGCGCT 21798
|||| || | | |||||||| ||||| |||||| | | ||| ||| || |||
Sbjct 433 TAGGTGATCTTGAATCTTCGTTACTAACCAAGTCATCCATTATACCAATCTGCGGACGCA 492
Query 21799 TACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 21838
|||| || || |||||| ||||||| ||| |||||
Sbjct 493 TACCATATTCTTTAAAACCACGAACACCAGACTTAGCACC 532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 233315287371782
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