Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_029017.1 Length=73420 Score E Sequences producing significant alignments: (Bits) Value seq486019 250 1e-61 seq488807 161 5e-35 seq255804 145 4e-30 seq505100 87.8 8e-13 >seq486019 Length=823 Score = 250 bits (276), Expect = 1e-61 Identities = 439/641 (68%), Gaps = 10/641 (2%) Strand=Plus/Plus Query 21417 CGGTCTTCATCCGACATGATGCGAAGCATCAGTTCTTGGTTGAACGTGTCGATCTTCCCT 21476 || || || || |||||||| || | ||| || |||||||| || || || | ||| ||| Sbjct 177 CGATCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTAAATGTATCCACCTTACCT 236 Query 21477 GCCTTGAGTGCAGCCTCGTACTTCTTCTTCACGAAGTCGTAGGTGAAACGGTCAGGCCAT 21536 ||||| | || ||| || | || || | || | |||||| |||||||| Sbjct 237 GCCTTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATATGAGAAACGATCAGGCCAC 296 Query 21537 GCACCACGGAAATCTTTTTCCGAGCATGGGAACTTCTCGCACACCGGGTAGACGTTCACC 21596 ||||| | || ||||| || || || || || | ||||| ||||| ||||| || Sbjct 297 GCACCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACACACAGGGTACACGTTAACT 356 Query 21597 TTCCAGGCACCGGACTCGACTGCTTTGTACAGCGGATCCTTGGCGTTAAACGGTGTACCC 21656 ||| ||||| ||||| ||||||||||| | ||||| | |||||| || ||||| Sbjct 357 GCCCAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGCGAGTTAAAGGGAGTACCT 416 Query 21657 GACCAGATGATCATGTTACGGGTTGGGTGCAATGCGTAGTCCACCGCCTTGTAAACCGTG 21716 |||||||| | | | || |||||| ||||||||||| | |||||||| || || Sbjct 417 GACCAGATTACCTTAGAGCGTATTGGGTCTAATGCGTAGTCAATAGCCTTGTACACTGTA 476 Query 21717 TCTTCGATAGACGCAATCACAGTAGGCGAGCGAGCATCTTCGTCTGAAACCAGGTCATCG 21776 ||||| | || | ||| || |||| || | |||||||| || || | | |||||| Sbjct 477 TCTTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTCATCCGATATTAAGTCATCT 536 Query 21777 AGAACCGCAAGCTGGGGGCGCTTACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCA 21836 || || |||||| || || ||||||||| || |||||||| ||||| ||||| || Sbjct 537 AGTACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACCACGTACACCGGTCTTTGCG 596 Query 21837 CCGTAGCCTTTGACGATGAAGACGTTCCCTTCGATGTTGACGAACTTCCACCGAATGTCG 21896 || || ||||| ||||| || ||| || || ||||| || | ||| || || || Sbjct 597 CCATAACCTTTTACGATAAATCGGTTACCATCAATGTTATTAAATTCCCAGCGTATATCA 656 Query 21897 GTGAAATCTGTACCACCGCCGGGAGGCAGGAACTGCTGCAAGAAAGCACTGTTCTCCCAG 21956 |||| ||| | ||| | ||| | || || | ||| ||||| Sbjct 657 GTGA----------ACCTAGTGTAGGTACATACTTAAGTAAAAATTCTGAGTTTTCCCAA 706 Query 21957 CGGTACTCCAAGTTCTTCCGCATGTTCTTGACCCCGTTATCGATGGAGTCGGATACATAC 22016 ||| ||||||||||||| ||||||||||| || ||||| || || || || |||||| Sbjct 707 CGGAACTCCAAGTTCTTACGCATGTTCTTAACACCGTTCTCTATACTATCTGAAACATAC 766 Query 22017 AGAGCAAGGTCTACCTTCCCGAAACCAGGAAGATCACCATA 22057 ||||| | | || || || || || || | ||||| || Sbjct 767 AGAGCCAAGGGAACTTTACCAAACCCGGGGATGTCACCGTA 807 >seq488807 Length=774 Score = 161 bits (178), Expect = 5e-35 Identities = 237/334 (71%), Gaps = 6/334 (2%) Strand=Plus/Minus Query 21385 CGTACCACTGCAACTCGTTGTCCTGGATCAAGCGGTCTTCATCCGACATGATGCGAAGCA 21444 ||||||| | | ||| | || | || || | |||||| || ||||| || | |||| Sbjct 331 CGTACCAATTAATCTCACTATCTTTAATTAATCTGTCTTCTTCTGACATAATTCTTAGCA 272 Query 21445 TCAGTTCTTGGTTGAACGTGTCGATCTTCCCTGCCTTGAGTGCAGCCTCG---TACTTCT 21501 ||| |||||||| || | || | ||| ||||| || | |||| | | || | || Sbjct 271 TCAACTCTTGGTTAAAAGAATCCACCTTACCTGCTTTAA---CAGCTTTGGTGTATTGCT 215 Query 21502 TCTTCACGAAGTCGTAGGTGAAACGGTCAGGCCATGCACCACGGAAATCTTTTTCCGAGC 21561 || | || |||| || ||||| || |||||||||| || ||| |||| | || | Sbjct 214 TCATTACATAGTCATACGTGAAGCGATCAGGCCATGAGCCTTTGAACTCTTCTCTCGTAC 155 Query 21562 ATGGGAACTTCTCGCACACCGGGTAGACGTTCACCTTCCAGGCACCGGACTCGACTGCTT 21621 | || || ||||| ||||| ||||| || || || | ||| || || ||||| ||||||| Sbjct 154 AAGGAAATTTCTCACACACAGGGTACACATTTACGTACCAAGCTCCTGACTCAACTGCTT 95 Query 21622 TGTACAGCGGATCCTTGGCGTTAAACGGTGTACCCGACCAGATGATCATGTTACGGGTTG 21681 |||||| || || |||||||||||| ||||| |||||||| || | ||| | Sbjct 94 TGTACAATGGGTCACGGGCGTTAAACGGAGTACCTGACCAGATTATTTTAGACTTGGTAG 35 Query 21682 GGTGCAATGCGTAGTCCACCGCCTTGTAAACCGT 21715 | ||||||||||| ||||| || || ||||| || Sbjct 34 GATGCAATGCGTAATCCACTGCTTTATAAACTGT 1 >seq255804 Length=3791 Score = 145 bits (160), Expect = 4e-30 Identities = 441/673 (66%), Gaps = 10/673 (1%) Strand=Plus/Plus Query 21561 CATGGGAACTTCTCGCACACCGGGTAGACGTTCACCTTCCAGGCACCGGACTCGACTGCT 21620 || || |||||||| || | || || || | || | ||| ||||| || || | ||| Sbjct 2297 CAAGGAAACTTCTCACATATAGGATATACACTTACATCCCATGCACCAGATTCCATAGCT 2356 Query 21621 TTGTACAGCGGATCCTTGGCGTTAAACGGTGTACCCGACCAGATGATCATGTTACGGGTT 21680 | |||| ||||| || || ||||| || ||||| ||| || || | || || Sbjct 2357 TCATACAAAGGATCATTAGCATTAAAGGGAGTACCAAGCCATATAGTCTTAG-ACTTCTT 2415 Query 21681 -GGGTGCAATGCGTAGTCCACCGCCTTGTAAACCGTGTCTTCGATAGACGCAATCACAGT 21739 ||||| | ||| || | | |||| || ||||||| |||| ||| || || Sbjct 2416 AGGGTGAAGTGCATACTTAATAGCCTGACCTACTGTGTCTTTAATAGCTTGAATAACTGT 2475 Query 21740 AGGCGAGCGAGCATCTTCGTCTGAAACCAGGTCATCGAGAACCGCAAGCTGGGGGCGCTT 21799 ||| || || | || || | ||| | |||||| || | || | ||| ||||| | Sbjct 2476 AGGTGAACGTGAGTCATCATTACTAACTAAGTCATCTAGGATAGCCATCTGTGGGCGTGT 2535 Query 21800 ACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACCGTAGCCTTTGACGATGAAGAC 21859 ||||||||||||| ||||||| | ||| ||||||||||| || || || || | ||| Sbjct 2536 ACCCATCTCCTTCACACCACGAATACCTGTCTTGGCACCATACCCCTTTACTACGAATTT 2595 Query 21860 GTTCCCTTCGATGTTGACGAACTTCCACCGAATGTCGGTGAAATCTGTACCACCGCCGGG 21919 | || | || || |||| ||||| ||| || ||| | || || || | Sbjct 2596 AGTACCATTAATATTCTTAAACTCCCACCTAATATCTGTG--AGCTTTA-ATCCTTCTTT 2652 Query 21920 AGGCAGGAACTGCTGCAAGAAAGCACTGTTCTCCCAGCGGTACTCCAAGTTCTTCCGCAT 21979 ||| || ||| ||| ||||| |||| ||||||| || |||| |||||||| | ||| Sbjct 2653 AGGTAGATACTTCTGTAAGAACTCACTACTCTCCCAACGAGACTCTAAGTTCTTTCTCAT 2712 Query 21980 GTTCTTGACCCCGTTATCGATGGAGTCGGATACATACAGAGCAAGGTCTACCTTCCCGAA 22039 ||| | |||||||| || || ||||||||||| | | | ||||| || || Sbjct 2713 TGACTTAATACCGTTATCAATACTATCTGATACATACAGCACTAATTTAACCTTACCAAA 2772 Query 22040 ACCAGGAAGATCACCATAGACC-CCCAGGTACAGAAACAGGTACTCACCCATCAGAGTGG 22098 || | || || ||| | || || | | ||||||||| |||| || || | Sbjct 2773 GGACGGCATTCTGCCGTACACCGCTAAGATATAAGATAAGGTACTCAGCCATTAGTGTAG 2832 Query 22099 TCTTGGCCGCACCACGGAAAACCATGTTGGCGATACG--TCGTTCGCCACTGCCTACCTG 22156 |||| | |||||||| || | |||||| || |||| || | |||| ||| || Sbjct 2833 TCTTACCTGCACCACGAAAGATCATGTTAGC--TACGTTTCTTAATCCACCATCTAACTT 2890 Query 22157 ATCGAGCATCCGGTAATGGAGAACCGGAGTCTTGTTCTCCTCGCCTTGCCCGCCGTTCAC 22216 ||| | |||| | || | ||| || | ||||||||| || | || || || || Sbjct 2891 ATCTAACATCTTTAAGTGAATAACAGGTGATACGTTCTCCTCACCCTCACCACCATTAAC 2950 Query 22217 CAGCTTGATGAAC 22229 ||||| || ||| Sbjct 2951 TAGCTTAATAAAC 2963 >seq505100 Length=723 Score = 87.8 bits (96), Expect = 8e-13 Identities = 299/460 (65%), Gaps = 16/460 (3%) Strand=Plus/Plus Query 21387 TACCACTGCAACTCGTTGTCCTGGATCAAG-CGGTCTTCATCCGACATGATGCGAAGCAT 21445 ||||||||||| || | || || | |||| | ||||| || ||| || | ||||| Sbjct 81 TACCACTGCAAATCACTATCATGTA-CAAGTCTATCTTCTTCACTCATAATCTGTAGCAT 139 Query 21446 CAGTTCTTGGTTGAACGTGTCGATCTTCCCTGCCTTGAG-TGCAG---CCTCGTACTTCT 21501 || ||||||| ||| | ||| | | |||| || ||| | |||||| || Sbjct 140 AAGCTCTTGGTAGAA----ACCATCAGCGTTACCTTCAGCAACAGACTCTTCGTACATCG 195 Query 21502 TCTTCACGAAGTCGTAGGTGAAACGGTCAGGCCATGCACCACGGAAATCTTTTTCCGAGC 21561 | | || | ||||| || |||||| |||||| || || ||| |||| | Sbjct 196 TACTAACATACTCGTAACCAAAGCGGTCATCCCATGCGCCTTTAAACTCTGATTCCTCAC 255 Query 21562 ATGGGAACTTCTCGCACACCGGGTAGACGTTCACCTTCCAGGCACCGGACTCGACTGCTT 21621 | || |||||||| || || || || || || | ||| ||||| ||||| | |||| Sbjct 256 AAGGAAACTTCTCACATACTGGATAAACACCTACATCCCAAGCACCAGACTCAATAGCTT 315 Query 21622 TGTACAGCGGATCCTTGGCGTTAAACGGTGTACCCGACCAGATGATCAT---GTTACGGG 21678 || | ||||| || || ||||| || ||||| ||| || || | ||| | Sbjct 316 GATATAAAGGATCGTTAGCATTAAAGGGAGTACCAAGCCATATTCTCTTAGACTTA---G 372 Query 21679 TTGGGTGCAATGCGTAGTCCACCGCCTTGTAAACCGTGTCTTCGATAGACGCAATCACAG 21738 ||||||| || || || | | |||| ||| || || | ||||| ||| ||| Sbjct 373 TTGGGTGTAACGCATACTTAATAGCCTGACCAACTGTATCCTTAATAGATTGAATAGCAG 432 Query 21739 TAGGCGAGCGAGCATCTTCGTCTGAAACCAGGTCATCGAGAACCGCAAGCTGGGGGCGCT 21798 |||| || | | |||||||| ||||| |||||| | | ||| ||| || ||| Sbjct 433 TAGGTGATCTTGAATCTTCGTTACTAACCAAGTCATCCATTATACCAATCTGCGGACGCA 492 Query 21799 TACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 21838 |||| || || |||||| ||||||| ||| ||||| Sbjct 493 TACCATATTCTTTAAAACCACGAACACCAGACTTAGCACC 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233315287371782