Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_029042.1 Length=156833 Score E Sequences producing significant alignments: (Bits) Value seq520838 86.0 6e-12 seq451005 82.4 8e-11 >seq520838 Length=421 Score = 86.0 bits (94), Expect = 6e-12 Identities = 87/112 (78%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 72049 TCCTGAACTCACCAAACCATTGGGATGGGGAGCAAACT---GGTAACAAGCACGTGTTCT 72105 || ||||||||||||||||||||| || | |||||| ||||||||||| |||||| Sbjct 371 TCATGAACTCACCAAACCATTGGGGTG---ATCAAACTCTTGGTAACAAGCATTTGTTCT 315 Query 72106 TCATTCTTGAAGGCTGTGCTAATCCTGAAGGTACTCGTGGTTTCTACAACGA 72157 |||| | || || |||| ||| || ||| | | ||||| |||||||| || Sbjct 314 TCATGTTAGAGGGTTGTGTTAACCCAGAACCTGCGCGTGGATTCTACAATGA 263 >seq451005 Length=948 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 19453 GGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACCACTGAGCTAC 19512 |||||||||||||||||| ||| |||||||||||||| ||||||| |||| |||||||| Sbjct 77 GGCTGGACTTGAACCAGCAACCTGTCGATTATGAGTCGCCTGCTCT-ACCATTGAGCTAC 135 Query 19513 GG 19514 || Sbjct 136 GG 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498441798596560