Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_029042.1
Length=156833
Score E
Sequences producing significant alignments: (Bits) Value
seq520838 86.0 6e-12
seq451005 82.4 8e-11
>seq520838
Length=421
Score = 86.0 bits (94), Expect = 6e-12
Identities = 87/112 (78%), Gaps = 6/112 (5%)
Strand=Plus/Minus
Query 72049 TCCTGAACTCACCAAACCATTGGGATGGGGAGCAAACT---GGTAACAAGCACGTGTTCT 72105
|| ||||||||||||||||||||| || | |||||| ||||||||||| ||||||
Sbjct 371 TCATGAACTCACCAAACCATTGGGGTG---ATCAAACTCTTGGTAACAAGCATTTGTTCT 315
Query 72106 TCATTCTTGAAGGCTGTGCTAATCCTGAAGGTACTCGTGGTTTCTACAACGA 72157
|||| | || || |||| ||| || ||| | | ||||| |||||||| ||
Sbjct 314 TCATGTTAGAGGGTTGTGTTAACCCAGAACCTGCGCGTGGATTCTACAATGA 263
>seq451005
Length=948
Score = 82.4 bits (90), Expect = 8e-11
Identities = 56/62 (90%), Gaps = 1/62 (2%)
Strand=Plus/Plus
Query 19453 GGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACCACTGAGCTAC 19512
|||||||||||||||||| ||| |||||||||||||| ||||||| |||| ||||||||
Sbjct 77 GGCTGGACTTGAACCAGCAACCTGTCGATTATGAGTCGCCTGCTCT-ACCATTGAGCTAC 135
Query 19513 GG 19514
||
Sbjct 136 GG 137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498441798596560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |