Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_029102.1 Length=36051 Score E Sequences producing significant alignments: (Bits) Value seq512931 161 2e-35 >seq512931 Length=538 Score = 161 bits (178), Expect = 2e-35 Identities = 354/525 (67%), Gaps = 38/525 (7%) Strand=Plus/Minus Query 21193 AAGGGGTACTTCTCGGCATCACTCAGGTTCGGGTTGAGCATGAACTGCAAAGTGAAGCCA 21252 || |||||||||||| || || ||||||||||||||||||||||| | || ||||||| Sbjct 518 AACGGGTACTTCTCGATGTCGCTAAGGTTCGGGTTGAGCATGAACTGTAGAGCGAAGCCA 459 Query 21253 GCCTTACCGTATTCCAACTCACGCTCACGCAGGTCTTCCATATCGAAGCGAACGGGGTCA 21312 |||| || ||| | || ||||||||||||||||| |||||| |||| ||||| Sbjct 458 CCCTTGCCATATGAGAGTTCGCGCTCACGCAGGTCTTCATCATCGAATCGAATAGGGTCT 399 Query 21313 GTCGGTTGACCTTGGAGCATCTCGAACCCATCGTTGAACTCTTCGCGGAGCATCG---GG 21369 || || | | ||| ||||| | || | | ||| | |||||| | || Sbjct 398 GTAGGCTTCCAGAACAGCTTCTCG---TCGTCTTCCAGCTCCT---TGAGCATGGTAAGG 345 Query 21370 GCCAGA------CGGTCGCCAT---AGTACAAGTCTTCCTCACGGCTA---------CGC 21411 ||||| || | ||| | || | ||| |||| || | || Sbjct 344 TCCAGACGTGAGCGCTTGCCCTTGGCGTGCCAGTAGGACTCAAGGTCAGCCACATCCCGA 285 Query 21412 GGATAGAGCGCAGGCCAGATGATTGTGGTGTACCCACGGTTATCTTCGAGTTCCTTGTAC 21471 || || | ||||||||||| | || | ||| || ||| || || |||||| |||| Sbjct 284 GGGTATCGTGCAGGCCAGATCGTCGTCGAGTAGCCGCGG---TCCTCAAGTTCCCTGTAG 228 Query 21472 AAGGTCATTTCGGTTTGAGGCGTACCAAGGTAGATAACGCGAGAAGTCGGCAGCGGTTTC 21531 | |||||||||||| || || || || | |||||| | || ||| || ||| Sbjct 227 AGGGTCATTTCGGTCTGTGGGGTTCCCAAGTAGATGA-TCGTACCGTC-----AGGCTTC 174 Query 21532 AGAAGCGCAGCAAATTCCTGCACCAGAGTCCACAGCTTCTCACGGGCACCTTGAGTTGCG 21591 || | |||| | ||||||| ||||| | || | || | || || || | Sbjct 173 AGGATCGCATCGAATTCCTTTACCAGCTCGCCAAGGTGATCCCTTGCGGACTGTGTGCCA 114 Query 21592 GAGTTAGACGGAATCTCAACGTCATCCGCTATGATGATATCAGCACGGCTACCAGTCA-A 21650 ||||| || | ||||||||||||||| |||| ||| ||||||||||||||||||| | Sbjct 113 GAGTTGCCGGGGACCTCAACGTCATCCGCAATGAGGATGTCAGCACGGCTACCAGTCATA 54 Query 21651 CTGACCAGTGATACCCACCGACTTCACAGACGGAGAGTGGTCAGG 21695 | | ||||| | |||||| |||||||| || || ||||||||| Sbjct 53 CCG-CCAGTAACACCCACGGACTTCACCGAGGGGCTGTGGTCAGG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114522453666012