Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq150714 132 4e-26
>seq150714
Length=4870
Score = 132 bits (146), Expect = 4e-26
Identities = 128/162 (79%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC-GCGAA 34623
|| || || || ||||| || ||||| |||||| |||||||||| |||||||| ||||
Sbjct 2147 GACCTGCCCCTCATGGCTCTGCCCCCCTGCCACGCCCTCTGCCAGTTCTACGTGTGCGA- 2205
Query 34624 TGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTT 34683
||| |||||||| || ||||| || || || ||||| || ||||| | || ||||| ||
Sbjct 2206 TGGCGAGCTGTCGTGTCAGCTGTACCAGCGCTCGGGGGATATGGGTCTGGGCGTGCCTTT 2265
Query 34684 CAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||| || || || ||||| || ||||| ||||||||||| ||
Sbjct 2266 CAATATCGCCAGCTACGCACTTCTCACCTACATGATCGCCCA 2307
Score = 132 bits (146), Expect = 4e-26
Identities = 128/162 (79%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| ||||| || ||||| || || || ||||| ||||| || | |||
Sbjct 2307 TGGGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGCACGCCCAGACCC 2248
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC-GACGTAGAATTG 6738
|| || ||||| || || || ||||| || |||||||| ||| |||| |||||||| ||
Sbjct 2247 ATATCCCCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCA-TCGCACACGTAGAACTG 2189
Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|||||||| |||||| ||||| || ||||| || || || ||
Sbjct 2188 GCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTC 2147
Score = 116 bits (128), Expect = 3e-21
Identities = 121/159 (76%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 34288 GGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGG 34347
|||| | || ||| |||||||||||||| ||||||||||||||||| || ||||
Sbjct 1552 GGGGTCAACAAACGCCAAGGAGCTCTCGGAGAAAGGGGTGAAGATCTGGGAAGCCAACGG 1611
Query 34348 GTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCC 34407
||||||| | || ||||| || | |||||| | | || ||||||||| |||| ||
Sbjct 1612 GTCTCGACAGTTCCTGGATAACCTCGGGTTCACGGACAGAGAAGAGGGCGACCTGGGACC 1671
Query 34408 GGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| ||||| ||||||||||| ||||| || || || ||
Sbjct 1672 CGTGTACGGATTCCAGTGGAGGCACTTCGGTGCAGAATA 1710
Score = 116 bits (128), Expect = 3e-21
Identities = 121/159 (76%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || || ||||| ||||||||||| ||||| || || |||| ||||||||| ||
Sbjct 1710 TATTCTGCACCGAAGTGCCTCCACTGGAATCCGTACACGGGTCCCAGGTCGCCCTCTTCT 1651
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | |||||| | || ||||| || | ||||||||||| || ||||||||||||
Sbjct 1650 CTGTCCGTGAACCCGAGGTTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATCTTC 1591
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057
||||| |||||||||||||| ||| || | ||||
Sbjct 1590 ACCCCTTTCTCCGAGAGCTCCTTGGCGTTTGTTGACCCC 1552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445317865153440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |