Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq6427 132 1e-25
seq503174 116 9e-21
seq142355 114 3e-20
seq142420 113 1e-19
seq483502 111 4e-19
seq127494 107 5e-18
seq152719 105 2e-17
seq296161 102 2e-16
seq268572 102 2e-16
seq459689 100 7e-16
seq242303 100 7e-16
seq142421 95.1 3e-14
seq59939 93.3 1e-13
seq312118 89.7 1e-12
seq59938 86.0 1e-11
>seq6427
Length=3314
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||| ||||| ||||| || || |||| ||||| |||| | || | ||||||
Sbjct 3123 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 3182
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || || || || ||||| |||||||||||
Sbjct 3183 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 3242
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| |||||||||||| || || || || | ||||| |||
Sbjct 3243 TGGATCTTGGCCTTGACATTTTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTC 3302
Query 225682 TTGCCCGT 225689
||||||||
Sbjct 3303 TTGCCCGT 3310
>seq503174
Length=251
Score = 116 bits (128), Expect = 9e-21
Identities = 105/131 (80%), Gaps = 1/131 (1%)
Strand=Plus/Minus
Query 7733 GGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAAT 7792
|| ||||||| ||||| ||||| ||| ||||||||||||| ||||||||||| | |
Sbjct 234 GGATGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGG 175
Query 7793 CTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-A 7851
| |||||| || |||||||||||||||||||| |||| | | |||| || ||||| |
Sbjct 174 CCCCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCTATTTAA 115
Query 7852 CGCGTTAGCTT 7862
||||||||||
Sbjct 114 TGCGTTAGCTT 104
>seq142355
Length=845
Score = 114 bits (126), Expect = 3e-20
Identities = 110/140 (79%), Gaps = 1/140 (1%)
Strand=Plus/Minus
Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783
||| || || || |||||| ||||| ||||| ||| ||||||||||||| |||||||||
Sbjct 643 TATGTCAAGTGTAGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGC 584
Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|| | | | |||||| || |||||||||||||||||||| |||| | | |||| ||
Sbjct 583 TTGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGG 524
Query 7844 AATA-TTTACGCGTTAGCTT 7862
|| || | ||||||||||
Sbjct 523 TCTACTTAATGCGTTAGCTT 504
>seq142420
Length=711
Score = 113 bits (124), Expect = 1e-19
Identities = 109/139 (78%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784
|| || || || |||||| ||||| ||||| ||| ||||||||||||| ||||||||||
Sbjct 643 ATGTCAAGAGTAGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCT 584
Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844
| | | | |||||| || |||||||||||||||||||| |||| | | |||| ||
Sbjct 583 TGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGT 524
Query 7845 ATA-TTTACGCGTTAGCTT 7862
|| || | ||||||||||
Sbjct 523 CTACTTAATGCGTTAGCTT 505
>seq483502
Length=393
Score = 111 bits (122), Expect = 4e-19
Identities = 108/138 (78%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784
|| || |||| ||||||| ||||| ||||| ||| ||||||||||||| ||||||||||
Sbjct 383 ATGTCAAGGGATGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCT 324
Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844
| | | | |||||| || |||||||||||||||||||| |||| | | |||| ||
Sbjct 323 TGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGT 264
Query 7845 ATATTTA-CGCGTTAGCT 7861
| ||| |||||||||
Sbjct 263 CAACTTAGTGCGTTAGCT 246
>seq127494
Length=1980
Score = 107 bits (118), Expect = 5e-18
Identities = 100/126 (79%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796
|||||| ||||| ||||| ||| ||||||||||||| ||||||||||| | | | |
Sbjct 884 GGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCC 825
Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGCG 7855
||||| || |||||||||||||||||||| |||| | | |||| || || ||| |||
Sbjct 824 CGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCTACTTATTGCG 765
Query 7856 TTAGCT 7861
||||||
Sbjct 764 TTAGCT 759
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/100 (81%), Gaps = 3/100 (3%)
Strand=Plus/Plus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| |||||||| | ||||||| | || ||| | |||||
Sbjct 195 TGAGAGGATGATCAGCCACACCGGGACTGAGACACGGCCCG-GACTCCTACGGGAGGCAG 253
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAG 6865
|||||| ||||||| ||||||||| |||| | ||||| ||
Sbjct 254 CAGTGGGGAATATTGGACAATGGGGGAAACCCTGATCCAG 293
>seq152719
Length=2073
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| ||||| |||| ||||||||||| |||| || ||||| | || || | |||||
Sbjct 514 CAGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCTGACATGGTGCGACCATC 573
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || || ||||| || | || || || || || || || ||||| ||
Sbjct 574 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATC 633
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| || ||| || |||||||| || ||| || || | ||||| ||
Sbjct 634 CTGGATCTTAGCTTTTACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATAGT 693
Query 225681 CTTGCCCGTCA 225691
||| || ||||
Sbjct 694 CTTACCAGTCA 704
>seq296161
Length=326
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784
|| || || || |||||| ||||| ||||| ||| ||||||||||||| ||||||||||
Sbjct 123 ATGTCAAGAGTAGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCT 64
Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
| | | | |||||| || |||||||||||||||||||| |||| | | |||| ||
Sbjct 63 TGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGG 5
>seq268572
Length=1256
Score = 102 bits (112), Expect = 2e-16
Identities = 106/138 (77%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784
|| || ||| ||||||| ||||| ||||| || ||||||||||||| ||||||||||
Sbjct 661 ATGTCAAGGCCTGGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCT 602
Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG- 7843
| | | | |||||| || |||||||||||||||||||| |||| | | |||| ||
Sbjct 601 TGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGT 542
Query 7844 AATATTTACGCGTTAGCT 7861
| || | |||||||||
Sbjct 541 CAACTTAATGCGTTAGCT 524
>seq459689
Length=365
Score = 100 bits (110), Expect = 7e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || || || ||||| || ||||| |||||||| |||||
Sbjct 7 GAAAATTTGACCATCTGTAATCGAAATTACGTTTGTTGGAATATATGCAGAAACGTCACC 66
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
||||| ||||||| || ||||| || |||| ||| || |||||
Sbjct 67 AGCTTGAGTTTCGATAATAGGTAGTGCCGTTAATGAACCTCCACC 111
>seq242303
Length=641
Score = 100 bits (110), Expect = 7e-16
Identities = 101/130 (78%), Gaps = 1/130 (1%)
Strand=Plus/Minus
Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794
|||||||| ||| | |||| ||| ||||||||||||| ||||||||||| | | |
Sbjct 493 TTGGTAAGGTTCCTCGCGTATCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCC 434
Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CG 7853
|||||| || |||||||||| || |||||| ||||| | | ||||||| ||| ||| |
Sbjct 433 CCCGTCAATTCCTTTGAGTTTCAAACTTGCGTTCGTACTCCCCAGGTGGGATACTTATCA 374
Query 7854 CGTTAGCTTA 7863
| || |||||
Sbjct 373 CTTTCGCTTA 364
>seq142421
Length=429
Score = 95.1 bits (104), Expect = 3e-14
Identities = 81/96 (84%), Gaps = 3/96 (3%)
Strand=Plus/Plus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 56 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 114
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGAT 6861
|||||| ||||||| ||||||||||||||| ||||
Sbjct 115 CAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT 150
>seq59939
Length=800
Score = 93.3 bits (102), Expect = 1e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| |||||||| || || ||||| || | || || || || ||||| ||||||
Sbjct 8 CCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCC 67
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| ||| |||||| ||||| | || || || | |||
Sbjct 68 TTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGGTG 127
Query 225676 ATCGTCTTGCCCGT 225689
|| |||||||||||
Sbjct 128 ATGGTCTTGCCCGT 141
>seq312118
Length=428
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/100 (82%), Gaps = 3/100 (3%)
Strand=Plus/Plus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| |||||||| |||| ||| ||||| | |||| ||| | || ||| | |||||
Sbjct 286 TGAGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCA-GACTCCTACGGGAGGCAG 344
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAG 6865
|||||| ||||||| |||||||||||||||| ||||| ||
Sbjct 345 CAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAG 384
>seq59938
Length=2926
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/189 (70%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| || |||| ||||| || || |||| ||||| | | || | |||||
Sbjct 2726 CAGGACCAGACGGAGGGTGGACTCCTTCTGGATGTTGTATAGAG--AGGGTGCGGCCATC 2783
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| || || ||||| || | || || || || ||||| |||||||||||
Sbjct 2784 TTCCGAATGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTC 2843
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||| ||| ||| |||||||| || || || || | ||||| ||
Sbjct 2844 CTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGT 2903
Query 225681 CTTGCCCGT 225689
|||||| ||
Sbjct 2904 CTTGCCAGT 2912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1184501894138388
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