Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq150714 143 2e-29 seq274812 100 2e-16 >seq150714 Length=4870 Score = 143 bits (158), Expect = 2e-29 Identities = 138/177 (78%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| ||||| || | |||||||||||| || || ||| Sbjct 2319 AGTCCTGTGATGTGGGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGC 2260 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || ||||| ||||| || | |||||| ||||| ||||| ||||| || |||| | Sbjct 2259 ACGCCCAGACCCATATCCCCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCAC 2200 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTG 29890 ||||| ||||| || | ||| ||||| || || || |||||||| || |||| || Sbjct 2199 ACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCTGTG 2143 Score = 141 bits (156), Expect = 7e-29 Identities = 120/148 (81%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| |||||||||||||| |||||||| ||||||||||| |||||||| |||| | || Sbjct 1700 CGAAGTGCCTCCACTGGAATCCGTACACGGGTCCCAGGTCGCCCTCTTCTCTGTCCGTGA 1641 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 | || || |||| || | || || |||||||| ||||||||||| ||||| |||| Sbjct 1640 ACCCGAGGTTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATCTTCACCCCTTTCT 1581 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCC 30162 | |||||||| |||| |||||| ||||| Sbjct 1580 CCGAGAGCTCCTTGGCGTTTGTTGACCC 1553 Score = 87.8 bits (96), Expect = 1e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 29886 CTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 29945 ||||||||||||| ||||||| ||||||||| ||||||||||| || ||| |||| || Sbjct 2017 CTTTGGGGTTCCATGCACACATGATGATGCGTCTGTCTTCTGGATTCTTCTGGATGGTGT 1958 Query 29946 CCACGGCGTTTTGCAGCTGATCCACCCC 29973 | | | |||| |||||||| || || || Sbjct 1957 CGATGACGTTCTGCAGCTGGTCGACACC 1930 >seq274812 Length=490 Score = 100 bits (110), Expect = 2e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 || |||||||||||| | ||| | ||||| |||| ||||| ||||| || |||||||| Sbjct 135 CTGCCTGCTGAGGACGATGTTGATCCTGTTGTTCAGGGGTCTGTTCTTCTCCGGGATGGA 194 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||| ||||| || ||||| |||||||| ||||| |||||| Sbjct 195 AAACCACGTCTTCCTGCCCATGATCACCACATTCTGTTTACCT 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403561905192772