Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq150714 143 2e-29
seq274812 100 2e-16
>seq150714
Length=4870
Score = 143 bits (158), Expect = 2e-29
Identities = 138/177 (78%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || |||| ||| || |||||||| ||||| || | |||||||||||| || || |||
Sbjct 2319 AGTCCTGTGATGTGGGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGC 2260
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || ||||| ||||| || | |||||| ||||| ||||| ||||| || |||| |
Sbjct 2259 ACGCCCAGACCCATATCCCCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCAC 2200
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTG 29890
||||| ||||| || | ||| ||||| || || || |||||||| || |||| ||
Sbjct 2199 ACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCTGTG 2143
Score = 141 bits (156), Expect = 7e-29
Identities = 120/148 (81%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074
|||| |||||||||||||| |||||||| ||||||||||| |||||||| |||| | ||
Sbjct 1700 CGAAGTGCCTCCACTGGAATCCGTACACGGGTCCCAGGTCGCCCTCTTCTCTGTCCGTGA 1641
Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134
| || || |||| || | || || |||||||| ||||||||||| ||||| ||||
Sbjct 1640 ACCCGAGGTTATCCAGGAACTGTCGAGACCCGTTGGCTTCCCAGATCTTCACCCCTTTCT 1581
Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCC 30162
| |||||||| |||| |||||| |||||
Sbjct 1580 CCGAGAGCTCCTTGGCGTTTGTTGACCC 1553
Score = 87.8 bits (96), Expect = 1e-12
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 29886 CTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 29945
||||||||||||| ||||||| ||||||||| ||||||||||| || ||| |||| ||
Sbjct 2017 CTTTGGGGTTCCATGCACACATGATGATGCGTCTGTCTTCTGGATTCTTCTGGATGGTGT 1958
Query 29946 CCACGGCGTTTTGCAGCTGATCCACCCC 29973
| | | |||| |||||||| || || ||
Sbjct 1957 CGATGACGTTCTGCAGCTGGTCGACACC 1930
>seq274812
Length=490
Score = 100 bits (110), Expect = 2e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
|| |||||||||||| | ||| | ||||| |||| ||||| ||||| || ||||||||
Sbjct 135 CTGCCTGCTGAGGACGATGTTGATCCTGTTGTTCAGGGGTCTGTTCTTCTCCGGGATGGA 194
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||| ||||| || ||||| |||||||| ||||| ||||||
Sbjct 195 AAACCACGTCTTCCTGCCCATGATCACCACATTCTGTTTACCT 237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403561905192772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |