Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq28532 95.1 1e-14 seq231358 91.5 1e-13 >seq28532 Length=8763 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || || ||||||||||| || || || || || | ||||||||||| |||||||| || Sbjct 1943 TCATCCCTGCTAATCAGCTCATTGGAGAAGGTAAGCCCGGGCATTAAGCCTCTCTTCTTC 1884 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 |||||||| || || || || || || || ||||| || || || ||||| ||||| || Sbjct 1883 AGCCAAAAGATGGCAGCGAACGAACCGGAGAAGAAGATTCCCTCCACGGCAGCAAAAGCC 1824 Query 4692 AC 4693 || Sbjct 1823 AC 1822 >seq231358 Length=2322 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 ||||||||||| || || || || || || || | |||||||| | |||||||| || Sbjct 630 TCGTCTCTGCTGATGAGCTCATTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 689 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || || || || || |||||||| ||||| || || || |||||||| || || Sbjct 690 AGCCAGAAGATGGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCGGCGAAGGCC 749 Query 4692 ACTAATCG 4699 || | ||| Sbjct 750 ACCACTCG 757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424314537082166