Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq150714 161 7e-35 >seq150714 Length=4870 Score = 161 bits (178), Expect = 7e-35 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| || | |||||||||||| || || || Sbjct 2319 AGTCCTGTGATGTGGGCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGC 2260 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || ||||| |||||||| | |||||| ||||||||||| ||||| ||||||| Sbjct 2259 ACGCCCAGACCCATATCCCCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCAC 2200 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 27384 ||||| ||||| || | ||||||||| || || |||||||||||| || |||| || Sbjct 2199 ACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCTGTG 2143 Score = 152 bits (168), Expect = 4e-32 Identities = 135/169 (80%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 27488 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGT 27547 ||||| || ||| ||||| ||||| |||||||| ||||| |||||||| |||||||||| Sbjct 1721 TCATGGTCGAGTATTCTGCACCGAAGTGCCTCCACTGGAATCCGTACACGGGTCCCAGGT 1662 Query 27548 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 | |||||||| |||| | ||| || || |||| || | || || |||||||| | Sbjct 1661 CGCCCTCTTCTCTGTCCGTGAACCCGAGGTTATCCAGGAACTGTCGAGACCCGTTGGCTT 1602 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||||||| ||||| ||||| |||||||| |||| |||||| ||||| Sbjct 1601 CCCAGATCTTCACCCCTTTCTCCGAGAGCTCCTTGGCGTTTGTTGACCC 1553 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 27380 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 27439 ||||||||||||| || |||| ||||||||| ||||||||||| || ||| |||| || Sbjct 2017 CTTTGGGGTTCCATGCACACATGATGATGCGTCTGTCTTCTGGATTCTTCTGGATGGTGT 1958 Query 27440 CCACGGCGTTTTGCAGCTGATCCACCCC 27467 | | | |||| |||||||| || || || Sbjct 1957 CGATGACGTTCTGCAGCTGGTCGACACC 1930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 367140670583762