Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031011.1
Length=168993
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 158 1e-33
seq506238 138 1e-27
seq351952 105 7e-18
seq511551 95.1 1e-14
seq487923 95.1 1e-14
seq509673 87.8 2e-12
seq326422 84.2 2e-11
>seq449735
Length=3187
Score = 158 bits (174), Expect = 1e-33
Identities = 488/742 (66%), Gaps = 25/742 (3%)
Strand=Plus/Minus
Query 37875 TTTGTTGGAATAGCAATTTCACAGCACAAGTTACTCTGACGAATAGGTGCCTTTTCACGA 37934
|| ||||| | |||||||| | || || ||| || |||||||||||| || | |
Sbjct 755 TTAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCA 696
Query 37935 ATAAACGGAGTATAGTTATTCGTATTATCAATGAACTGTACATAAATTCTTGCTGTTCCT 37994
|| ||||| | | |||| | |||| | |||| ||||| | | || | |
Sbjct 695 ATGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTT 636
Query 37995 GAGCGTTCAGTCATGAGCAA---TTCA-AATAGTTCACGGGCTTTAATACGCTTTTTACG 38050
| ||||| || |||| || | || |||||| |||||||| || ||||||||
Sbjct 635 GCACGTTCT----TGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACG 580
Query 38051 AAT--ATTAGGGACTTTTTCTGCTGCTTCGCATAATTCACGG-AAACGGCT-TTGGTCTT 38106
||| ||| | ||| ||| | || ||||| | || |||| | ||||||||
Sbjct 579 AATTGATTCGT--CTTGTTCGTAT--TTTACATAAAGCGCGTCAAACTCGTCTTGGTCTT 524
Query 38107 TAAAATAAGAATAATAAAGCTCGCCACCCATTTAATGTGGACTGAACAAAGTAATGTAAT 38166
|||| | | || ||||| ||| || | | || || ||||| |||||||| |
Sbjct 523 CAAAAAATGCATCGTAAAG---GCCTGGCACATCAGAGGGGCTAAACAAGGTAATGTAGT 467
Query 38167 CGTTCTTTCCGAATCGTTCCATCATCAAATCATTCAGTTGAACACCATAATCCATATGAC 38226
||| || || || ||| | | ||| | || || || ||||| | |||||
Sbjct 466 CGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGAC 407
Query 38227 GAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCA 38286
| | |||||| || || || || ||||||||| | || | || ||||| ||||| |
Sbjct 406 GCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTA 347
Query 38287 AATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGAATTCCGCCCTGTGAACA 38344
||||||||| || || | ||| || || ||||||||||| | ||||| || |||||
Sbjct 346 AATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACA 289
Query 38345 TGAGTTAACTGCAGCCTGAAAATGTTTCCAAAAAGGAATAACACCAGGATGGCATACATC 38404
||||| || | ||||| || || ||||||||||| ||| | |||| | | ||
Sbjct 288 GCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTC 229
Query 38405 ACCCATGCCAATCTCAGAACCTTCGGCACGAATCATACCAACGTTAATACCAATTCCAGC 38464
|| ||| ||| | ||| |||||||| ||| ||||||| ||||| || ||
Sbjct 228 GCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGC 169
Query 38465 GCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTTATTGATAGACTTCAATG-AAT 38523
|||| || | |||| |||||||| || || | || || || |||| | |
Sbjct 168 ACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGA-ATCAAGGCTGT 110
Query 38524 CACCTGCCTCAATAACAACACATGAACTAAACTGTCGAGTCGGAGTACGGCAACCAGCCA 38583
| || ||| || | ||||| || |||||||| || || || ||||| ||| ||||
Sbjct 109 CGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCA 50
Query 38584 TAATAGGAGTTGGCAATGAAAT 38605
|||| || || || | ||||||
Sbjct 49 TAATTGGCGTAGGTAGTGAAAT 28
>seq506238
Length=275
Score = 138 bits (152), Expect = 1e-27
Identities = 141/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 126777 ATTACAAACTCTCGGTAAAGGTACGAGCGATAACATCGCGCTGCTGTTCCGGAGTCAGAG 126836
||||||| | || ||||| ||||| | | || || |||| ||||| || || | |
Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97
Query 126837 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 126896
||||||| || ||||| ||||| |||||||| || || | || ||||||||||| || |
Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157
Query 126897 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 126956
| ||||| |||||||||| ||||||||||| | || || ||||| | ||||||||||
Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217
Query 126957 CTTC 126960
||||
Sbjct 218 CTTC 221
>seq351952
Length=416
Score = 105 bits (116), Expect = 7e-18
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 126791 GTAAAGGTACGAGCGATAACATCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 126850
||||||||||| | ||| ||||| ||| ||||| | ||| | |||||||| || |||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 126851 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 126910
|| ||||| |||||||| || || | || ||||| || || |||| | | ||||||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 126911 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCA 126961
| ||||||| || || |||||||| | ||||||||||||||||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCA 204
>seq511551
Length=634
Score = 95.1 bits (104), Expect = 1e-14
Identities = 191/277 (69%), Gaps = 16/277 (6%)
Strand=Plus/Minus
Query 108296 CGAGGAAGATTCAGTGTTACAACACCAAGATTATTACGTCCATCAAGAATTTCATTACCA 108355
||||| || || | |||| ||||| | || ||||||||||||| | ||| ||||||
Sbjct 492 CGAGGTAGGTTTAAGCTTACCACACCTAAGTTGTTACGTCCATCAAACACTTCCTTACCA 433
Query 108356 GTCGAATCTTTCCATACGCTCAA--GAAACTACGGCAACCCATTGGAGAAACAGGAATAG 108413
| || ||||| |||| ||| | ||| || | ||| ||||| | ||
Sbjct 432 GAAGAGTCTTT--ATACTCTCCAAGGAAGCTCCTGCAGCCCATGCTTGCCT------TAA 381
Query 108414 ATGAACCAGTGATAGCTTTATTGTTCT--TAGCTGAAATAATATCAGGATACATTCTTTT 108471
| |||||| | || | | || | ||| ||| |||||||||| ||||| | ||
Sbjct 380 AACCACCAGTAACCTCTACAATCTTATCGTAGTTGA--TAATATCAGGGTACATACGCTT 323
Query 108472 GCTTGCACACTCTAGAGCAAGCTGCTTAATATCATAGTTCGGATCGTCTT-TATAAAGAT 108530
|| |||||||||||||| | ||| ||||||| |||||| || || || | | ||||| |
Sbjct 322 ACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGGTCTTCCTGTTTAAAG-T 264
Query 108531 TAACACCTTCTTCAACAAACATAACAAGCTTAGGGAA 108567
| ||||| |||| || | | | ||||||||||||
Sbjct 263 TGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAA 227
>seq487923
Length=1072
Score = 95.1 bits (104), Expect = 1e-14
Identities = 254/375 (68%), Gaps = 19/375 (5%)
Strand=Plus/Minus
Query 89645 ATACTAATTTATCTAGTACGTATTTTTGCCATGCATAATCATTACGGAATCCGAAAACCA 89704
||| |||||||| || | || || |||||||| ||||||||| |||||||| ||
Sbjct 528 ATAGTAATTTATATA---CATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472
Query 89705 CGTCATTTGAACGCATGCTT-ACTAC-TGCATTGACTTTCTTGTCACGAATCAGATACT- 89761
||||| ||| ||| || || || | | ||| | ||| || |||||||| | |||||
Sbjct 471 CGTCACATGAGCGC-TGATTGACAATATAGATTAA-TTTATTATCACGAATAA-ATACTT 415
Query 89762 GTACGGTATTCGTACACATGAAATCTGACATACCATCTTTATTGTAGTCAAACTGCATAG 89821
| || |||| ||||| || ||||||||||| ||| |||| | ||| || ||||
Sbjct 414 GAACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATAG 355
Query 89822 ATGGACGAGTATAAATCATGATACCACGTCGAGAATCAGGATTTTGACCAAGTTCAGCT- 89880
| || | |||||||||||| || | || | || || || | | || |||
Sbjct 354 AAGGTCTAGTATAAATCATAATTGCTTTACGTGTATTTTTATCTTTAAGTAATT--GCTC 297
Query 89881 AGACACATA-TCATATTGAGCATAGTTATCTTCTGACCAGATAGCCCAACCATAATTCGA 89939
| | || | |||||||| || ||| | | | ||| |||||||||||| ||
Sbjct 296 ACGCGCAGACGCATATTGATAATTATTAGCAGCACTAAAAATACACCAACCATAATTTGA 237
Query 89940 GTTAATTTCACCTTTAGAAGATGCTACCTGCTGCCAAATCTTTGG---TGTTTCACCTGG 89996
|||||||| ||||| | || ||| | | |||||||||||| | | ||||
Sbjct 236 GTTAATTTTACCTTCTGTGCTTGATACATCTTCCCAAATCTTTGGAATAGGTGCACC--- 180
Query 89997 AATATCTTTAACAAA 90011
|||||||| |||||
Sbjct 179 CATATCTTTTACAAA 165
>seq509673
Length=441
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 38205 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 38264
|| || || |||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287
Query 38265 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 38324
|| | | |||||||| |||||||| | || ||| | || || || ||||||
Sbjct 288 ACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCA 347
Query 38325 CGAATTCCGCCCTGTGAACATGAGTTAACTGCAGCCTGAAAATGTTTCCAAAAAGGAATA 38384
|| | ||||| ||||| || | ||||| |||| || || |||| | || || |||
Sbjct 348 CGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATA 407
Query 38385 ACACCAGGATG 38395
||| | |||
Sbjct 408 CAACCCGTATG 418
>seq326422
Length=2068
Score = 84.2 bits (92), Expect = 2e-11
Identities = 89/114 (78%), Gaps = 4/114 (4%)
Strand=Plus/Plus
Query 134513 CGCTCTACCAAACTGAGCTACACGA--AGTAAATTAAATTTGAGCGGATAATGAGAATCG 134570
||||||||||| |||||||| | | | | |||| | |||||| | | ||||||
Sbjct 292 CGCTCTACCAA-CTGAGCTATATCAGCATCACCATAAACTGGAGCGGGCAGCGGGAATCG 350
Query 134571 AACTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGC 134623
||| | ||||||||| ||||||| ||||||||||| |||||||||||| ||||
Sbjct 351 AACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537098194423760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |