Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031020.1
Length=163201
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 154 2e-32
seq351952 118 1e-21
seq155978 114 1e-20
seq427934 109 6e-19
seq484804 98.7 1e-15
seq511551 96.9 4e-15
seq458811 96.9 4e-15
seq506238 95.1 1e-14
seq24926 82.4 8e-11
>seq449735
Length=3187
Score = 154 bits (170), Expect = 2e-32
Identities = 333/491 (68%), Gaps = 8/491 (2%)
Strand=Plus/Minus
Query 139553 AAATATGCATCATACATACCTTCAACTTCATGCGGACTGAATAATGTGATATAGTCGTTT 139612
||| ||||||| || | ||| || ||| || || || || || || ||||||| |
Sbjct 521 AAAAATGCATCGTAAAGGCCTGGCACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCT 462
Query 139613 TTAATATAACGTTCGATCATTAAGTCATTAATCTGGACACCATAATCTAAATGACGAATA 139672
||||| |||| | ||||| | ||||| ||| || || |||||||||||||| |
Sbjct 461 TTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACG 402
Query 139673 CGGTTTTCATCGATACCTTTATTATTCTTCAGTACGATTAATTTTTCATATTCCAGATGC 139732
||||| ||||| | || ||||| || ||||| | | ||||| ||| | ||||
Sbjct 401 CGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGC 342
Query 139733 CACATCGGATAATATAATGTCGCCGCACCACCACGTACACCACCTTGTGAACATGATTTC 139792
|| | ||| || | || || || || || ||||||||||| ||||| ||||| |||
Sbjct 341 CAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTA 282
Query 139793 ACTGATGCCTGATGAGT-TTTCCAGAATGGAATAACACCAGTGTG--ACGAACTTCGCCC 139849
|| | || ||| ||| || | || |||||| ||| || || ||| |||||||
Sbjct 281 ACCGCTGTTTGA-AAGTGCTTATAAAAAGGAATACAACCCGTATGGTACG--CTTCGCCA 225
Query 139850 GCGCCAATTTTAGAACCTTCTGCACGATACATACCAGCATTAACACCAATACCAGCACGT 139909
|| ||| | ||| ||||||| ||| || |||| ||||| || ||||||
Sbjct 224 TTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGT 165
Query 139910 TTACTGATGTACTTAATAA-TACATTCGTTTGTCTTGTTAATTGAATCCAGCGAATCACC 139968
| | ||| |||| || | || || || |||||||||||| || || ||
Sbjct 164 TGCGATACGTATTTAACAATTGCAGACG-AGGTGGCGTTAATTGAATCAAGGCTGTCGCC 106
Query 139969 GCCTTCAATAACAACACAAGAGCTAAACTGACGTGTCGGAGTTCTTACGCCCGCCATAAT 140028
| || || | ||||| ||||||||||| ||||| || || | || || ||||||||
Sbjct 105 ACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAAT 46
Query 140029 CGGAGTAGGTA 140039
|| |||||||
Sbjct 45 TGGCGTAGGTA 35
>seq351952
Length=416
Score = 118 bits (130), Expect = 1e-21
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 52720 GTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAGTTAAAGCGAACA 52779
||||| ||||| | |||||||| ||| ||||||| || | |||||||| || ||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 52780 GCATAACCAGAAACACGGATAGTCAACTGTGGGTATTTTGTAGGGTCTTCCATCGCTTCA 52839
|| ||||| || ||||| || || || ||||| || || || | |||||| || ||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 52840 AGCAACATTTCACGATTCATTACGTTAACGTTCAGGTGCTGACCGCCTTC 52889
| ||||||||||| |||||||| |||||||| | ||| ||||| |||||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTC 203
>seq155978
Length=1540
Score = 114 bits (126), Expect = 1e-20
Identities = 256/377 (68%), Gaps = 7/377 (2%)
Strand=Plus/Minus
Query 142354 GTATCATGTACTAAAGAAAAAGTATATGTGTGTACGCATGAACGTAAACATCCTAATTCA 142413
|| ||| || ||| ||||| || | ||||| | ||| | |||||||| || | |||
Sbjct 1472 GTGTCACCTAATAATGAAAACGTGTGCGTGTGCATGCACGGGCGTAAACAGCCAAGCTCA 1413
Query 142414 ATTTCACCAGGGTTCCAGTAAGAAAGAATTTCACCACGATCGTCGATACCCGCTGACAGG 142473
| ||| || ||||| | || || |||||||| |||||||| ||||| | | |
Sbjct 1412 AATTCGCCTGGGTTGTAAAAACTAATTATTTCACCGCGATCGTCTATACCATTTTTTAAG 1353
Query 142474 TT-TTCATAGATTTTACGAAGTTGATCGAC--TTCA-CCATTAGGACCAACCCAATGTCT 142529
|| || || |||| | | |||| || | || | |||| || | |||| |
Sbjct 1352 TTATTAATTACTTTTGCTA-GTTGGTCTAGCGTTGAGCCATCTGGGCGCTGCCAAGCACG 1294
Query 142530 GCCCTGTACACCATAAACCCGGCCCATATCGTCTTCACCTTTACGATTTGGGTTTTTTAA 142589
|| ||||| |||||||| |||||||| ||||| ||||||||||| | || || || |
Sbjct 1293 CCCTTGTACGCCATAAACACGGCCCATGTCGTCCTCACCTTTACGGTGCGGATTATTAAG 1234
Query 142590 CCATGCTTCATTCTCATTGGCATTAGCATTCCAAGTATTTGTACCAAGTGCCCGGAAATC 142649
||| || ||| || || || || |||| ||| || || || | | | || || |
Sbjct 1233 CCAAGCGCTATTTTCGTTTGCGTTTGCATCCCAGGTTTTACAGCCTATTTCGCGAAACTG 1174
Query 142650 TGCTGC-AGACGACAGACCACGAATATAACCCAGCAGTTCGGCAATGGATGCTTTATAAA 142708
||| || | || ||||| | ||||| || | ||||||||| | |||||| |||
Sbjct 1173 TGCCGCGCTATCGTAG-CCACGCAAGTAACCGAGTAATTCGGCAATAGCTGCTTTGTAAT 1115
Query 142709 AACTTTTACGAGTGGTG 142725
| |||||||| ||||||
Sbjct 1114 AGCTTTTACGTGTGGTG 1098
>seq427934
Length=2050
Score = 109 bits (120), Expect = 6e-19
Identities = 472/730 (65%), Gaps = 21/730 (3%)
Strand=Plus/Minus
Query 142024 ACACTG--AATGGGTATTTAATTGGTTCGTGGTGTTGGTAGTTAACGATTTTAAAGTCAT 142081
|||||| || ||||||||||| | ||||| ||||| || | | | |||||||||
Sbjct 1538 ACACTGCGAAAGGGTATTTAATCGCATCGTGATGTTGATAATCTTCAACGCTAAAGTCAT 1479
Query 142082 CTGTGGTAACCCATGTCTCAACATCTTCCAGAGACTTGATGTTAGGGTTAATAATTAGTT 142141
| ||| ||||| || || | |||| || | || || || || || || ||||| |
Sbjct 1478 CCAAGGTTACCCAAGTTTCGATGTCTTTTAGGGTTTTAATTTTTGGATTGATGATTAGCT 1419
Query 142142 GAGGCTCGTCAAAG-GGCTCACGGGAGATCTGTGTCGGCAC-CATAGGT---AATTGGTC 142196
|||| |||| || || || | || ||| | | | | ||| ||| | ||||||
Sbjct 1418 TAGGCGATGCAAAACGGTTCGCGCGCGAGCTG-GACATCCCGCATGGGTTCAAGTTGGTC 1360
Query 142197 TTCATAGATATGTGCGTTCACAATCTTATAGAACATTTTACCTGGCTTGTTCCGGGTGAT 142256
||| || ||||| || || || ||||||| | | ||||| || || | | || ||
Sbjct 1359 TTCGTAAATATGAGCATTGACTATCTTATGGTATGCCTTACCAGGTTTATGGCCAGTAAT 1300
Query 142257 TTGAGCCATCAGATGCAGG-AATGTATACGCCTGGATTAAATCAAAGTTCAATCCTAATG 142315
|| ||||| | | ||| | ||| ||| | || | | | ||||| || |||| |
Sbjct 1299 CTGGGCCATTA-ACGCAAGTAATACATATACTTGTACCATGTTGAAGTTTAACCCTAGCG 1241
Query 142316 GAACATCCGCCGAACGTTGATAAACGGTCACATGCAAAGTATCATGTACTAAAGAAAAAG 142375
||||||| || || | | | | |||||||||| | ||| ||||||
Sbjct 1240 GAACATCACAACTGCGCTGTGTGCTGTTGAGGTACAAAGTATCACCGAGTAATGAAAAAT 1181
Query 142376 TATATGTGTGTACGCATGAACGTAAACATCCTAATTCAATTTCACCAGGGTTCCAGTAAG 142435
| | || | |||| || || || ||||| |||| | | ||||| | || | |
Sbjct 1180 GGTGTTCGTACATACATGGTCGCAAGCAACCTAAGTCAAATGCTCCAGGATGAAAGAAGG 1121
Query 142436 AAAGAATTTCACCACGATCGTCGATACCCG--CTGACAGGTTTTCATAGATTTTACGAAG 142493
| ||| ||||| || | || ||||| |||| ||| || ||||| | ||
Sbjct 1120 TTAAAATCTCACCGCGGTTATCTATACCATTACTGA--GGTCGTCGACGATTTGTTGCAG 1063
Query 142494 TTGATCGACTT---CACCATTAGGACCAACCCAATGTCTGCCCTGTA-CACCATAAACCC 142549
| |||||| | |||||| ||| | |||| ||||| | || || | |
Sbjct 1062 TAAATCGACATGACCACCATCAGG-CTTTGGAAATGCACGCCCTAACGCCCCGTATATCA 1004
Query 142550 GGCCCATATCGTCTTCACCTTTACGATTTGGGTTTTTTAACCATGCTTCATTCTCATTGG 142609
| |||||||| || |||||||||||||||||| | || |||||||| || |||||||
Sbjct 1003 GCCCCATATCATCAGGACCTTTACGATTTGGGTTATCTAGCCATGCTTGGTTTTCATTGG 944
Query 142610 CATTAGCATTCCAAGTATTTGTACCAAGTGCCCGGAAATCTGCTGCA-GACGACAGACCA 142668
| || || | ||| || || || || | || | ||||| || ||| | || |||
Sbjct 943 CGTTGGCGTCCCATGTTTTAGTGCCTAAAGCTCTAAAATCGGCCGCATTTTGGTAG-CCA 885
Query 142669 CGAATATAACCCAGCAGTTCGGCAATGGATGCTTTATAAAAACTTTTACGAGTGGTGTCT 142728
|| | ||| || | | ||||| |||| | || | || |||||||| ||||| ||
Sbjct 884 CGTAAATATCCTAAGATCTCGGCTATGGCAGACTTCCAGAAGCTTTTACGTGTGGTCACT 825
Query 142729 AATGGACATT 142738
|| ||| |||
Sbjct 824 AAAGGAAATT 815
>seq484804
Length=980
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 142540 CCATAAACCCGGCCCATATCGTCTTCACCTTTACGATTTGGGTTTTTTAACCATGCTTCA 142599
|| ||||| || |||||||| ||||||||||| || | ||| || | ||| || |||
Sbjct 112 CCGTAAACGCGCCCCATATCATCTTCACCTTTGCGGTGAATGTTATTAAGCCAAGCATCA 171
Query 142600 TTCTCATTGGCATTAGCATTCCAAGTATTTGTACCAAGTGCCCGGAAATCTGCTGCAGAC 142659
|| |||||||||||||| ||| || || ||||| ||| || ||||| || |||
Sbjct 172 TTTAAATTGGCATTAGCATCCCAGGTTTTAGTACCTAGTTTACGAAAATCAGCGGCA-TT 230
Query 142660 GACA-GACCACGAATATAACCCAGCAGTTCGGCAATGGATGCTTTATAAAAACTTTTACG 142718
| || |||||| |||||||| | | || ||||| | || || |||| || |||||
Sbjct 231 GTCATAACCACGGATATAACCAATAAACTCAGCAATCGCTGACTTGAAAAAGCTCTTACG 290
Query 142719 AGTGGTGTCTAATGGA 142734
|| || |||||||
Sbjct 291 CGTAGTTATTAATGGA 306
>seq511551
Length=634
Score = 96.9 bits (106), Expect = 4e-15
Identities = 219/327 (67%), Gaps = 2/327 (1%)
Strand=Plus/Minus
Query 37674 ATGATGTCCGGGTACATTCGTTTGGATGAACATTCAAGAGCCAATCGTTTAATTGCATAA 37733
|| || || |||||||| || || | ||| || ||||| || ||||||| |||
Sbjct 345 ATAATATCAGGGTACATACGCTTACTGGCACACTCTAGAGCTAACTGTTTAATATTATAG 286
Query 37734 CCAGGATCTCCCGGATTAAGGTTAATACCTTCTTCGATAAACATAACCAGTTTAGGGAAG 37793
|| ||| || | |||| ||| | ||| |||| ||| | | || ||||||||
Sbjct 285 TTTGGGTCTTCCTGTTTAAAGTTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAAT 226
Query 37794 ATTGCAGTGATTTTATTTTTACCAAGACCTTTAATTCTGTTTTCGAGAATTGATTTCTGA 37853
| || || | || | ||| | |||||||| | || || || |||||||||
Sbjct 225 ACCGCTGTCCTCTTTGATGCACCTAAGCCTTTAATACGCACCTCAAGGATGGATTTCTGA 166
Query 37854 ATTAACTGAGATTCCCAGGATGTACCAGTACCAAATGAAACAGTGACAAAAGGTG-TTTG 37912
|||| || ||| ||||| | ||||| |||||| || || |||||||| | ||||
Sbjct 165 ATTAGCTTAGACTCCCAACAAGTACCTAAACCAAAACCTACCGT-ACAAAAGGGGCTTTG 107
Query 37913 TCCATTCGAGCTGAATAATGTGTTAATTTCGTATTCATATGCCTGGAATGAATCGTATAC 37972
|||||| | || ||| |||||||||||||| ||| ||||| | ||| ||
Sbjct 106 TCCATTTGCTGTGTGTAAGGTGTTAATTTCGTACTCAAGACTTTGGAAAGCATCATAAGT 47
Query 37973 TTCTTTTTCTGTTTTCTTTATAGCATA 37999
||||| ||||| |||| | |||||
Sbjct 46 CTCTTTCTCTGTCATCTTCGTTGCATA 20
>seq458811
Length=383
Score = 96.9 bits (106), Expect = 4e-15
Identities = 81/99 (82%), Gaps = 4/99 (4%)
Strand=Plus/Plus
Query 66383 TTTACTCGTTTTAAATAAAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTT 66442
|||||| ||||| || |||| ||||| ||||||||||||| |||||||| |||
Sbjct 32 TTTACTTGTTTTCAA----ATGGTGCACCCAGAAGGATTCGAACCTTCGACCTACGCCTT 87
Query 66443 AGAAGGCCGTTGCTCTATCCAGCTGAGCTAAGAGTGCAT 66481
|||||| ||||||||||||||||||||||| | | ||||
Sbjct 88 AGAAGGGCGTTGCTCTATCCAGCTGAGCTATGGGCGCAT 126
>seq506238
Length=275
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 52708 TACATAGCTTCAGTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAG 52767
|||| | ||| ||||||||||| | | ||| || ||||||||||| || | |||
Sbjct 40 TACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAG 99
Query 52768 TTAAAGCGAACAGCATAACCAGAAACACGGATAGTCAACTGTGGGTATTTTGTAGGGTCT 52827
||||| || || || ||||| || ||||| ||||| || ||||| |||||| ||||| |
Sbjct 100 TTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGT 159
Query 52828 TCCATCGCTTCAAGCAACATTTCACGATTCATTACGTTAACGTTCAGGTGCTGACCGCCT 52887
| | || || ||| |||||||| | || || ||||| | || ||||| |||
Sbjct 160 TTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCACCT 219
Query 52888 TC 52889
||
Sbjct 220 TC 221
>seq24926
Length=5984
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459
|||||| ||||| ||||||||||||||| |||| | ||||||||||| | |||||||
Sbjct 5840 AAATGGTGCACCCGGCAGGATTCGAACCTGCGACCACCCGCTTAGAAGGCGGGTGCTCTA 5781
Query 66460 TCCAGCTGAGCTA 66472
|||| ||||||||
Sbjct 5780 TCCAACTGAGCTA 5768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518685542727120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |