Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031022.1 Length=108050 Score E Sequences producing significant alignments: (Bits) Value seq426744 214 1e-50 seq511551 154 1e-32 seq435060 145 5e-30 seq506238 125 5e-24 >seq426744 Length=341 Score = 214 bits (236), Expect = 1e-50 Identities = 238/313 (76%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 15128 ATTAAGATGCAGCGTAAGCACCAGATACAACGCCATT---TGCAAAGTAACGTTGCAGGT 15184 |||| | ||| ||||| | ||||| || | || || ||||| |||||| |||| Sbjct 29 ATTACGCTGCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGT 88 Query 15185 TAACACGCTGAGTAACGTAGTATGCGTCACGCTGTTTACCAGCTTGGCGCTCACGTTCAA 15244 ||| ||| ||||| ||||||||||| ||||| || ||||||||||| ||||||||||| | Sbjct 89 TAAGACGTTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTA 148 Query 15245 CAGTAACAGCACGCTGACGTGGCATTACGAAGTTATCTTTATAAACAATAACTGCGAACT 15304 | |||| || ||| ||||| || | |||||||| || ||||| ||| ||| | Sbjct 149 CTGTAATAGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATT 208 Query 15305 CTTTATCAACCGCTTTAGCTGGGAAGTATTCAGAAACTACAACTGGCAGACCATAAATAC 15364 || | || ||||||||||||||||| | |||||||| ||||| ||||| || |||| Sbjct 209 CTGAACTGACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGATAC 268 Query 15365 GACCAACCTGACCCTGCAG-TTTAAC-AG-CATCGTTACCAACCTGTGCAACATCCTGCC 15421 ||||||| || || || || |||||| || ||| |||||| || ||||||||||| Sbjct 269 GACCAACTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTGCC 328 Query 15422 ATTCTTCATCTTC 15434 ||||||||||||| Sbjct 329 ATTCTTCATCTTC 341 >seq511551 Length=634 Score = 154 bits (170), Expect = 1e-32 Identities = 282/402 (70%), Gaps = 12/402 (3%) Strand=Plus/Plus Query 77344 TGCTGTGTATGCTACTGAGCTTACTGAAAAAGAGTGTTATGATGCATTCCAAGCTCTAGA 77403 |||||| ||||| || || | || || |||||| ||||||||| |||||| ||| || Sbjct 13 TGCTGTTTATGCAACGAAGATGACAGAGAAAGAGACTTATGATGCTTTCCAAAGTCTTGA 72 Query 77404 GTATGAAACTAATTCATTATTTAACTCTAATGGGCAGA-CCCCTTTTGTTACGCATGGCT 77462 ||| |||| ||| | ||| | | ||||| || | |||||||||| ||| || | Sbjct 73 GTACGAAATTAACACCTTACACACAGCAAATGGACAAAGCCCCTTTTGT-ACGGTAGGTT 131 Query 77463 TTGGATTAGGTCAGGAGTGGGAGGAAAGGATGATTCAGAAAGCCATCCTCCAAAATCGTA 77522 |||| |||||| |||||| | | | ||||||||| ||||||| | |||| Sbjct 132 TTGGTTTAGGTACTTGTTGGGAGTCTAAGCTAATTCAGAAATCCATCCTTGAGGTGCGTA 191 Query 77523 TTAAAGGTTTAGGTGCTGCTGAGTCAACCCCTATCTTCCCTAAACTAGTATTCT--CAGT 77580 ||||||| |||||||| | || || | | |||||||| || ||| || | | Sbjct 192 TTAAAGGCTTAGGTGCATCAAAGAGGACAGCGGTATTCCCTAAGCT--TATCCTAACTAT 249 Query 77581 TAAAGAAGG-GTTAAATAAAAATCCAGG-CGATCCTAACTACGATATAAAACAGCTAGCA 77638 |||||| || || || | ||| |||| || || ||||| |||| |||||| |||| Sbjct 250 TAAAGACGGTGTCAACTTTAAA--CAGGAAGACCCAAACTATAATATTAAACAGTTAGCT 307 Query 77639 CTTGAGTGTTCTGCTACCCGTATGTACCCAGACTATT-TAAGCTATGAGAAAGTTGTAGC 77697 || |||||| | || ||||||||||| || |||| | | ||| || || |||||| Sbjct 308 CTAGAGTGTGCCAGTAAGCGTATGTACCCTGA-TATTATCAACTACGATAAGATTGTAGA 366 Query 77698 TGTTACTGGTGATTTTAAAGCCCCTATGGGTTGTCGTAGCTT 77739 |||||||||| |||||| || ||||| || | ||||| Sbjct 367 GGTTACTGGTGGTTTTAAGGCAAGCATGGGCTGCAGGAGCTT 408 >seq435060 Length=507 Score = 145 bits (160), Expect = 5e-30 Identities = 331/492 (67%), Gaps = 27/492 (5%) Strand=Plus/Plus Query 94962 AACATGAGAAATGAACCTGATAAATACCCTGACTTCCACTCTAACATCGCACACATGGTA 95021 || |||| | | || ||| || || || ||||||||| |||||| || |||||||| Sbjct 23 AAGATGAAAGAAGATCCTACCAAGTATCCCGACTTCCACAGTAACATAGCTCACATGGTG 82 Query 95022 TTTAAATTGCAATGTGAACCCCGTGATGTTAAGAAGCTGTTCCCAGCTCTGCGTCAGGCT 95081 ||||| | | ||| | || || |||||||| || |||||||| || | |||||| Sbjct 83 TTTAACCTACCTTGTAAGCCTGAGGAAGTTAAGAAACTATTCCCAGCCCTAAGGCAGGCT 142 Query 95082 GCTAAGGCAATTACCTTTGGTATTTTGTATGGTTCTGGCCCAGCGAAAGTAGCTCATTCT 95141 || ||||| || || ||||||||| | | ||||| || |||| ||||| | Sbjct 143 GCGAAGGCGATAACATTTGGTATTCTATTCGGTTCAGGAGCAGCATCTGTAGCAGAGCAA 202 Query 95142 GTTAACGAAGCTCTTCTGGAACAGGCTGCTAAGACAGGCGAACCGTTTGT--TGAATGTA 95199 |||||| |||| || ||| | || ||| ||| || |||| | || | Sbjct 203 GTTAACTTAGCTAAGCTAGAATTAGGTG--AAG-CAGCTGA-----TTGTACTAAAGAAA 254 Query 95200 CCGTTGCAGATGCGAAGGACTATATCGAAACTTACTTCGGTCAGTTCCCTCAGCTTAA-G 95258 || |||| | || |||||| |||||| | ||||||| ||||| | Sbjct 255 TCGCCGCAGGT---------TACATCGAAGTGTACTTCAAGCGGTTCCCTAGACTTAAAG 305 Query 95259 CGTTGGATTGATAAGTGCCACGATCAGATCA---AGAACTTTGGATTCATCTATAGTCAC 95315 ||| |||||||| || || ||| | ||| |||| ||||| || || | ||| Sbjct 306 CGT-GGATTGATTCTTGTCATGATGAAATCCGTCAGAAA---GGATTTATATACAACCAC 361 Query 95316 TTTGGTCGTAAGCGTCGTCTGCACAACATCCATTCCGAAGATCGTGGTGTTCAGGGTGAA 95375 || || ||||||||| | | ||||||||| ||| ||| | || ||| |||| | Sbjct 362 TTCGGCCGTAAGCGTAGATTACACAACATCTCTTCTAGCGATAGAGGCGTTGTAGGTGGA 421 Query 95376 GAAATCCGTTCTGGATTTAACGCAATCATTCAGTCTGCATCTTCTGATAGCCTGTTGTTA 95435 ||||||||||| |||||||| || ||||| |||||||| || |||||| | | || || Sbjct 422 GAAATCCGTTCAGGATTTAATGCTATCATACAGTCTGCGTCATCTGATCACTTACTGCTA 481 Query 95436 GGTGCTATTGAT 95447 || ||| | ||| Sbjct 482 GGAGCTGTAGAT 493 >seq506238 Length=275 Score = 125 bits (138), Expect = 5e-24 Identities = 132/172 (77%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 55502 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAAACGTACA 55561 ||||||||||| | | ||||| | ||||||||| | || | || ||||||||| || Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111 Query 55562 GCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC- 55620 ||||| ||||| ||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171 Query 55621 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTC 55671 | || | | ||||||| ||||||||| || |||| || ||||| || || Sbjct 172 TCCAATGTT--TCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 343421560135642