Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 302 6e-77
seq496362 172 8e-38
seq103378 95.1 2e-14
>seq44246
Length=4029
Score = 302 bits (334), Expect = 6e-77
Identities = 990/1528 (65%), Gaps = 14/1528 (1%)
Strand=Plus/Minus
Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165
|| ||||| || || || || || || ||||| |||| || | || ||||| || ||
Sbjct 1774 AGCAGATGGGGGTTGACGATCTGGAACTCTCCTGACAGGACCCGGCGGGTGTAGATGTTG 1715
Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225
||||| || | || | || || ||||| |||| || || || || || || || |||
Sbjct 1714 CTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGC 1655
Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285
|| || |||| || | || || || | || || | ||| || || || ||
Sbjct 1654 ATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGC 1595
Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTA 77345
||||| ||||| || || | || ||||| | ||||| || || || || ||
Sbjct 1594 TTCCAGTCCCACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTG 1535
Query 77346 CTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTT--CAGCTAGTTCACAAC 77403
|| | || || | || || || || || || | | | | || ||||| || |
Sbjct 1534 CTGACGGGGGAGCC-TCGTACGTGTCGTAGGGGCC--CAGCTCGGCGGCCAGTTCGCAGC 1478
Query 77404 TCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 77463
| || |||| || |||| || || || || || |||| | || || || || |
Sbjct 1477 TGGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCCT 1418
Query 77464 CAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAA 77523
| || ||||| || ||| | | || || ||||| || || | ||||| || || |
Sbjct 1417 CGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGGCCCTGGACGCCGA 1358
Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583
|||| || || || || | ||| ||||| | || || || | || || | ||||
Sbjct 1357 TACCGATCGGCCTGTGGCGCTTGTTGGACTGATCGGCCTCGGGCACCGGGTAGAAGTTAA 1298
Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643
| ||||| || || || || || | || | ||||| ||| || ||||| |
Sbjct 1297 TCTCTATGATCTTGTTCAGGTTCTTCACGATCACTTTGGTCACAGACTCCAGTTTCTTGA 1238
Query 77644 AATCAAATCTTCCATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAA 77700
| ||||| | | || | || ||||||| | ||| || || || |||||||| |
Sbjct 1237 AGTCAAAAGTCCGCTCGGGGGTGACGTACATGTTGAGAGCGATGGAGGCCAGATTACACA 1178
Query 77701 CTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGA 77760
| || ||||||| | ||| |||| | || || || || || || || || ||||
Sbjct 1177 CAGCGACCTCATCGCCACTGGAGTATTCAACGATTTCCGTGCAGAGGTTGCTGCACTTGA 1118
Query 77761 TAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACG 77820
| || ||||| || || ||||||||||| | ||||| | ||| || || || || |||
Sbjct 1117 TGGTTCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACG 1058
Query 77821 GAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTAT 77878
| || || | || |||| || ||||| || | | ||| || || || ||| || |
Sbjct 1057 GCGTGCCCGACTCCGTCTGGGACTCGATGATGGCGTGCCACAC--CTGCTGAGCCTTCAC 1000
Query 77879 CATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCC 77938
|| | ||| || | ||| | |||||||| || || ||| ||||| || || ||
Sbjct 999 CACACGCTTGACCCGGCCCTCCCGCTCATATTGGGTGTAGAGCTTCTCAAACTCCTCCCC 940
Query 77939 CCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTC 77998
||| || |||| || |||| || | || ||||||| |||||||| |
Sbjct 939 CCAGCACTCGTCCAGCCCGGGGCTCTCGCTGGGACACATCAGAGACCAGTCCTGGTTGCT 880
Query 77999 CTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA-AATAGATCTCGGGTTC 78057
|| || | ||||| || || || || ||||| | ||| || || ||||||| || ||
Sbjct 879 CTCCACCCTCTTCATGAACAGGTCGGGGATCCACA-AGCCGTAGAAGAGATCTCTGGCTC 821
Query 78058 TATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCC 78117
| || || || || || || ||||| || || || || || || | | ||| | ||||
Sbjct 820 TCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCC 761
Query 78118 ATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATC 78177
| || || || || || || | | || ||||| || || || ||||| || | ||| |
Sbjct 760 ACGGCTCCAGGTACATGGCGAAGGCGCCGGGTCGCTTGTTGCCGCCCTGGTCGACATAGC 701
Query 78178 TGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTC 78237
|| ||||| || || || |||| ||| || | | ||||| || | || || || |
Sbjct 700 GTGCTGTGTTGTTGTAGACCCTCAGCATGGGGACCAGCCCGTTGGAGTTGCCGTTGGTGC 641
Query 78238 CAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCA 78297
| | || || || || | | || || || | || | || ||||||||||||
Sbjct 640 CGGCGATGTAGCTCCCGGTGGATCGGATGCAGCTGACGGCCACACCGATTCCTCCTGCCG 581
Query 78298 TCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCA 78357
||| || || || || || | |||| || |||||||| ||||| || ||||| |||
Sbjct 580 ACTTGGAGATGAGTGCACACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCT 521
Query 78358 TCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATG 78417
||||| | || || || ||||| || | ||| | | |||||||| || || | |
Sbjct 520 TCATGGTGAGCAGGAAGCAGCTGGAGAGCTGAGGCCGGTTGGTTCCTGCGTTGAAGAGCG 461
Query 78418 TCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATT 78477
| || || || || || ||||| || || || || || ||||| || || || || | |
Sbjct 460 TGGGGGAGGCGTGGGTGAACCACTTCTCCGAGAGCAGGTTGTAGGTCTCGATGGCGGCGT 401
Query 78478 CTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537
| || ||| | || ||||| |||| || | ||| | ||| ||||| || | ||
Sbjct 400 CGATATCCGTCTTGTGGATTCCGACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCCG 341
Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597
|| || || || |||| || ||| ||| |||| || || || || || |||
Sbjct 340 CCACTTTGCCGTTGATCTTCAGCAGGTAGGATCGCTCCAGCGTCTTGAAGCCGAAGAAGT 281
Query 78598 TGTATGAAAAGTCTCTCTCGTAAATAAT 78625
|||| || || ||||| ||| | || ||
Sbjct 280 TGTAGGAGAAATCTCTGTCGAAGATGAT 253
>seq496362
Length=882
Score = 172 bits (190), Expect = 8e-38
Identities = 403/597 (68%), Gaps = 22/597 (4%)
Strand=Plus/Minus
Query 48143 TGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACC 48202
||| |||||||| |||| |||||| || | | ||| |||||||| || ||||| | ||
Sbjct 631 TGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCC 572
Query 48203 GGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATAT 48262
||||| | || |||||||| | ||| || || | |||| || || ||||| ||
Sbjct 571 TGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAAT 512
Query 48263 GCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATCCA 48322
||||| || || ||||| || | | || |||| || || | || || ||| |
Sbjct 511 TCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAA---GAATC----TGAATCAA 459
Query 48323 -CCGTTG---TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 48378
|| ||| |||||| || || ||||| || | | ||| | ||||| || || |
Sbjct 458 TCCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGA 399
Query 48379 AGAGAAAGtttttttCATTGCTA--TCTTTAACGTAAGTATCTATTAAAAGACTATACAT 48436
| | | | ||| || |||| ||||| || ||||| || ||||| | |||| |
Sbjct 398 ATAAATCGGCTTTCTC--TGCTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGT 341
Query 48437 TTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACA-TCTCGCTTCTGTGA 48495
|||| |||||||||||| || || || || || || ||| | | ||||||| |
Sbjct 340 TTCGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCAT 281
Query 48496 TCTGTACCTCCGT-ACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554
|| || || | ||||| | |||||| | ||| |||||||| ||||| || |||
Sbjct 280 ATTGCACTTCATTTACAAAGTT-TTCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCG 222
Query 48555 GCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTC 48611
|| ||||||||||| | ||||| ||||| |||| ||||| | ||| ||||||
Sbjct 221 GCGAAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCTTTATTCAACTTGTTATTC 162
Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671
||||| || | ||||| ||| | ||| | |||||| || ||||| || | |||
Sbjct 161 CAGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAA-ACTCGCTCCATG 103
Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTT 48728
|||||| | | ||| ||||| || | ||| || ||||| ||||| | ||||
Sbjct 102 GATTTATAAAATTCCCAAATATCTTGGTGCTTGATCGGAAAAATGACAAAACGATTT 46
>seq103378
Length=1867
Score = 95.1 bits (104), Expect = 2e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 77732 TATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTT 77791
|||||| || || ||||| || ||||||| || |||||||| || |||||||||||
Sbjct 1774 TATCTCTGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGTTGCTCTTCCC 1715
Query 77792 ATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851
||||| | |||||| || || || |||| || || |||||| ||||||| ||||| ||
Sbjct 1714 GTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTTTCAGTCTGTGACTCGATGAT 1655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 690105676953280
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