Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq44246 358 9e-94 seq496362 167 3e-36 seq388653 95.1 2e-14 seq103378 91.5 2e-13 seq514995 86.0 9e-12 >seq44246 Length=4029 Score = 358 bits (396), Expect = 9e-94 Identities = 1162/1796 (65%), Gaps = 10/1796 (1%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 ||||| ||||| || ||||| |||||| || | | | || ||||| || || Sbjct 1819 TTCTTCATCTCCTCGCCCCACAGCCCTCTCTCCGTCAGGTCCTTGAGCAGATGGGGGTTG 1760 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 || || || || ||||| |||| || | || ||||| || || ||||| || | || Sbjct 1759 ACGATCTGGAACTCTCCTGACAGGACCCGGCGGGTGTAGATGTTGCTGGTGTAGGCCTCG 1700 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 1699 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGC 1640 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | || || || | || || | ||| || || || || ||||| ||||| || Sbjct 1639 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 1580 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 || | || ||||| | ||||| || || || || ||||| | || || Sbjct 1579 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACGGGGGAGCC- 1521 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 | || || ||||| | || || | || |||||||| || ||||| | || || Sbjct 1520 TCGTACGTGTCGTAGGGGCCCAGCTCGGCGGCCAGTTCGCAGCTGGCCTCCAGGGCGGCG 1461 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 || || || || || || |||| | || || || || || | || ||||| || Sbjct 1460 TAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCCTCGGGGCTTTCAAAGGGG 1401 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 ||| | | || || || || || || || ||||| || || ||||| || || || || Sbjct 1400 TAACGCATCAGGATGAAGGCGTCGGCCAGGCCCTGGACGCCGATACCGATCGGCCTGTGG 1341 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||| ||||| || || || || | ||||| | ||||| ||||| || || || Sbjct 1340 CGCTTGTTGGACTGATCGGCCTCGGGCACCGGGTAGAAGTTAATCTCTATGATCTTGTTC 1281 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255 || || | || | ||||| ||| || ||||| || ||||| | | || Sbjct 1280 AGGTTCTTCACGATCACTTTGGTCACAGACTCCAGTTTCTTGAAGTCAAAAGTCCGCTCG 1221 Query 76256 A---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 | || |||| || ||||| || || || |||||||| || || ||||||| || Sbjct 1220 GGGGTGACGTACATGTTGAGAGCGATGGAGGCCAGATTACACACAGCGACCTCATCGCCA 1161 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 ||| |||| | || |||||||| || || || |||||||| ||||| || || || Sbjct 1160 CTGGAGTATTCAACGATTTCCGTGCAGAGGTTGCTGCACTTGATGGTTCCCAGGTTCTGC 1101 Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 ||||||||||| |||| || | ||| || || || | |||| || || | || || Sbjct 1100 TGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTGCCCGACTCCGTC 1041 Query 76433 TGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATTATAGATTTGTATCGCT 76490 || || ||||| || | | ||| || || || ||| || | | | ||| || Sbjct 1040 TGGGACTCGATGATGGCGTGCCACAC--CTGCTGAGCCTTCACCACACGCTTGACCCGGC 983 Query 76491 TCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAAC 76550 ||| | |||||||| || || | | ||||| || || ||||| || |||| | Sbjct 982 CCTCCCGCTCATATTGGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCC 923 Query 76551 CAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAA 76610 | || | || | |||||||||| ||||| || | || |||| ||||| | Sbjct 922 CGGGGCTCTCGCTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGA 863 Query 76611 AGAGATCAGGTATCCATAGAGCAATA-AATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 | || || || ||||| | ||| || || ||||||| || ||| | || || || || Sbjct 862 ACAGGTCGGGGATCCACA-AGCCGTAGAAGAGATCTCTGGCTCTCTGCTCCTCCTTCCCC 804 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 || ||||| || || || ||||| || | | ||| | ||||| || || || || || Sbjct 803 GTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAGGTACATG 744 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | || ||||| || || || ||||| || | ||| | || ||||| || || Sbjct 743 GCGAAGGCGCCGGGTCGCTTGTTGCCGCCCTGGTCGACATAGCGTGCTGTGTTGTTGTAG 684 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || |||| ||| || | | ||||| || | || || || || | || || || || Sbjct 683 ACCCTCAGCATGGGGACCAGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCG 624 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 | || || || | | | || |||||||||||| || ||||| || ||| Sbjct 623 GTGGATCGGATGCAGCTGACGGCCACACCGATTCCTCCTGCCGACTTGGAGATGAGTGCA 564 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 || | |||| ||||| ||||||||||| || || || ||| ||||| | || || || Sbjct 563 CACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAG 504 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 ||||| || | ||| | | |||||||| || || | || || || || || ||| Sbjct 503 CAGCTGGAGAGCTGAGGCCGGTTGGTTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTG 444 Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGA 77089 ||||| || || || || || ||||| || || || | || || |||||| | || Sbjct 443 AACCACTTCTCCGAGAGCAGGTTGTAGGTCTCGATGGCGGCGTCGATATCCGTCTTGTGG 384 Query 77090 ATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATT 77149 ||||| || | || | ||| | ||| ||||| || || || | || || || Sbjct 383 ATTCCGACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCCGCCACTTTGCCGTTGATC 324 Query 77150 TTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTT 77209 |||| || ||| ||| |||| || || || || || ||||||| || || ||||| Sbjct 323 TTCAGCAGGTAGGATCGCTCCAGCGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCTG 264 Query 77210 TCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTG 77269 ||| | || || |||| || || |||||| | | ||| || || | | Sbjct 263 TCGAAGATGATGGCCGAGTTGAGGCGGTCCTTGTGGGCGAGAACGATGTCGAGGGTCTCC 204 Query 77270 GTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCC 77329 | || || || || || | || || ||| || | ||| | | | ||| ||| Sbjct 203 TTGGAGATCATGGGGGAGTGGCGTCTGTTCAGAGGGTTGATGTAGCTGTACAGGTCCTCC 144 Query 77330 ATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCA 77389 || || || || || | || || || |||||||| || || || ||||| || | || Sbjct 143 ATCACCTCACTGAAAACCTTCTTCGTCTCCTTGTGCAGGTTGGAGACGGCGATCCGGGCG 84 Query 77390 GCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGC 77445 || || || || ||||| || |||| || ||| |||||| | || ||||| || Sbjct 83 GCGAGGATGGCGTAGTCCGGGTGTTTGGTGGTGAGGGTGGCGGTGATCTCTGCAGC 28 >seq496362 Length=882 Score = 167 bits (184), Expect = 3e-36 Identities = 398/594 (67%), Gaps = 16/594 (3%) Strand=Plus/Minus Query 46632 TGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCC 46691 ||| |||||||| |||| ||||| || | | ||| |||||||| || ||||| | || Sbjct 631 TGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCC 572 Query 46692 AGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATAT 46751 ||||| | || || ||||| | ||| || || | |||| || || ||||| || Sbjct 571 TGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAAT 512 Query 46752 GCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCA 46811 ||||| || || || || || | | || |||| || || | ||| || |||||| Sbjct 511 TCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAA---GAATCTGAATCAATCCA 455 Query 46812 CCTTTGA---GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 46868 |||| ||||| || || || || || | | ||| | ||||| || || || Sbjct 454 ---TTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGAA 398 Query 46869 GAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTC 46928 | | | ||| || | ||||| ||||| || || ||||| | |||| |||| Sbjct 397 TAAATCGGCTTTCTCTGCTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGTTTC 338 Query 46929 TGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTT-GCTTCAGTAATCT 46987 ||||| ||||| || || || || || || ||| | || ||||||| | | Sbjct 337 GCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCATATT 278 Query 46988 GTACCTC-TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 | || || | |||||| | ||||| | ||| ||||| || ||||| || ||| || Sbjct 277 GCACTTCATTTACAAAGTT-TTCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCGGCG 219 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTT---ATTCCAG 47103 |||||||| || | ||||| ||||| |||| ||| || || ||| || ||||||| Sbjct 218 AAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCTTTATTCAACTTGTTATTCCAG 159 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || || | ||||| ||| | ||| | |||||| || |||||||| || ||| | Sbjct 158 TCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAAACTCG-CTCCATGGAT 100 Query 47164 TTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTT 47217 ||||| | | ||| ||||| | | | |||||||||||| ||||| | |||| Sbjct 99 TTATAAAATTCCCAAATATCTTGGTGCTTGATCGGAAAAATGACAAAACGATTT 46 >seq388653 Length=382 Score = 95.1 bits (104), Expect = 2e-14 Identities = 262/392 (67%), Gaps = 20/392 (5%) Strand=Plus/Minus Query 76290 TACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATT--ACT 76347 |||| || ||||| |||| || | || |||| || ||||| || || | || || Sbjct 382 TACACACTGCTACTTCATCAGGAGAGGTGTATTCCATGATCTCTGTACACAAGTTTGACG 323 Query 76348 ACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAG 76407 | || |||||||| | ||| | |||||| || ||| | || ||||| | Sbjct 322 A-ACGA-ATAGTTCCTAAATTCTTTTGGTTTGATTTACGGTTTGCCGCATCTTTATATAA 265 Query 76408 AACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTC-CAGACGACTCTAG 76466 | | ||||||||||||| || || || ||||| | ||| |||| | || | || | Sbjct 264 CATATACGGAGTTCCAGTCTCGATTTGAGATTCTAGAAT---TTTCTCCCACAATTCATG 208 Query 76467 --CTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGT--ATATAACCGTTCA 76522 |||| ||| | ||| || | ||| ||||| | | | |||||| |||| Sbjct 207 TGCTTTAATTGTT--TTTCTACCTTTTCCAGCTTTCTCGTAGCTTTCATATAATGCTTCA 150 Query 76523 AATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCAC 76582 || || || || ||||||| | ||| ||||||||||| || |||||||| || | ||| Sbjct 149 AACTCTTCACCATAAACATCGTACAATCCAGGACATTCGTTAGGACACATTAAAGTCCAG 90 Query 76583 TCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 76642 | || ||||| | || |||||||| || | ||||| |||| | |||| |||| | Sbjct 89 TTTCCGTCTTCTTGTACACGTTTCATGAATAAATCAGAAGTCCACATGGCAAAGAATAAA 30 Query 76643 TCTCGGGTTCTACG---TTCTTCATTTCCTGT 76671 |||| || ||| |||||| |||||||| Sbjct 29 TCTC---TTGCACGCATTTCTTCTTTTCCTGT 1 >seq103378 Length=1867 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386 |||||| ||||| ||||| || | ||||| ||||| ||||| || ||||||||||| Sbjct 1774 TATCTCTGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGTTGCTCTTCCC 1715 Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 ||| || | |||||| || || | |||| || || |||||| ||||||| ||||| || Sbjct 1714 GTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTTTCAGTCTGTGACTCGATGAT 1655 >seq514995 Length=262 Score = 86.0 bits (94), Expect = 9e-12 Identities = 122/170 (72%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 77293 TCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAG--tttt 77350 ||| ||| | || || ||||||||||| | || ||| |||| || | | |||| Sbjct 175 TCCGTTTCTTGGGTTTACATAGTTAAACATTTCAGTCAT--CGTCTCTGAGAACGATTTT 118 Query 77351 tttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGA 77410 |||| | ||||||||| |||| || ||||| || ||||| ||||||||||||| Sbjct 117 GTTGTATTTGAGTGTAGATTTGATATTGCAATTCTCGCTGCTAGTTGTGCATAGTCAGGA 58 Query 77411 TGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTC 77460 ||| |||| | |||||| |||||||||||| | |||||||||| Sbjct 57 TGTGCAATAGTCATTGACGCTGCTGTTTCTGCCGCTAGATTATCTAATTC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708251294336640